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MacroAPE 1083:Motif TCAGNT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;2768!02;0;2768;0;0!03;2768;0;0;0!04;0;0;2768;0!05;692;692;692;692!06;0;0;0;2768 |macroape_1083_sample_pvalues=11376-118A8;0.255422!1...")
 
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2!10789-110H6;0.0206097!10828-111C9;0.0461821!10788-110H5;0.0354716!10792-110H9;0.0630936!10765-110E9;0.112457!10829-111D1;0.0776908!10830-111D2;0.0376695!10831-111D3;0.0382133!10832-111D4;0.0614579!10833-111D5;0.0134097!10764-110E8;0.0232549!10770-110F5;0.09199!10399-106A3;0.0373026!10400-106A4;0.0152051!10405-106A9;0.0338207!10834-111D6;0.014103!10835-111D7;0.0332868!10836-111D8;0.0199807!10837-111D9;0.0970236!10699-109G6;0.129735!10802-111A1;0.019102!10796-110I4;0.225652!10010-101C1;0.909081!10810-111A9;0.209735!10421-106C7;0.147278!10708-109H6;0.0725599!12235-129G3;0.0073578!12236-129G4;0.25332!12237-129G5;0.254495!10167-103B5;0.2573!10151-102I7;0.893936!10428-106D5;0.823505!10795-110I3;0.454385!10805-111A4;0.0145501!10052-101G7;0.769486!10189-103D9;0.314032!10589-108D4;0.635407!10425-106D2;0.990865!10427-106D4;0.983606!10702-109G9;0.145613!10432-106D9;0.443358!10496-107C1;0.31094!10718-109I7;0.361254!10011-101C2;0.0355552!10053-101G8;0.427848!10686-109F2;0.799718!10084-102B3;0.660712!10012-101C3;0.863325!10085-102B4;0.730504!10482-107A5;0.869342!10419-106C5;0.762596!10080-102A8;0.561977!10760-110E4;0.594401!10709-109H7;0.79004!10710-109H8;0.32104!10703-109H1;0.576762!10719-109I8;0.13015!10642-109A3;0.00436616!10177-103C6;0.0821176!10164-103B2;0.879204!10173-103C2;0.969198!10166-103B4;0.382435!10083-102B2;0.623144!10188-103D8;0.802236!10552-107I3;0.772808!10553-107I4;0.31267!10013-101C4;0.765881!10536-107G5;0.316116!10618-108G6;0.709265!10423-106C9;0.602498!10785-110H2;0.822579!12238-129G6;0.800822!12239-129G7;0.470502!12240-129G8;0.0441951!10416-106C2;0.248345!10801-110I9;0.0194699!10766-110F1;0.00316535!10824-111C5;0.0618268!10825-111C6;0.0903999!10826-111C7;0.123892!10454-106G4;0.135232!10409-106B4;0.11404!10638-108I8;0.0513257!10636-108I6;0.255745!10513-107D9;0.721657!10420-106C6;0.638698!10082-102B1;0.085786!10014-101C5;0.29229!10070-101I7;0.263712!10452-106G2;0.340978!10453-106G3;0.143444!10449-106F8;0.0211851!10042-101F6;0.0125734!10069-101I6;0.457873!10193-103E4;0.0679362!10631-108I1;0.686737!10438-106E6;0.0547164!10488-107B2;0.795448!10196-103E7;0.828493!10071-101I8;0.043636!10071-101I8;0.242307!10041-101F5;0.911141!10451-106G1;0.566701!10450-106F9;0.224049!10604-108F1;0.0425692!10605-108F2;0.247548!10606-108F3;0.418257!10603-108E9;0.258294!10497-107C2;0.348917!10448-106F7;0.625414!10643-109A4;0.433028!10426-106D3;0.708203!10431-106D8;0.933999!10197-103E8;0.996972!10443-106F2;0.0305345!10815-111B5;0.065914!10816-111B6;0.3594!10817-111B7;0.330372!10015-101C6;0.32114!10410-106B5;0.0842101!10054-101G9;0.757722!10758-110E2;0.090606!10711-109H9;0.0331507!10040-101F4;0.039114!10470-106I2;0.763333!10415-106C1;0.892439!10198-103E9;0.0934884!10614-108G2;0.220538!10612-108F9;0.27128!10549-107H9;0.94897!10615-108G3;0.215568!10487-107B1;0.871364!10433-106E1;0.508904!10688-109F4;0.540332!10444-106F3;0.603018!10444-106F3;0.0778!10485-107A8;0.0945373!10413-106B8;0.0473006!10175-103C4;0.107676!10161-103A8;0.818921!12131-128D7;0.718071!10624-108H3;0.0350462!10712-109I1;0.316609!10205-103F7;0.0527633!10206-103F8;0.506604!10207-103F9;0.238609!10050-101G5;0.80119!10051-101G6;0.0551843!10016-101C7;0.168403!10046-101G1;0.344915!10778-110G4;0.364276!10633-108I3;0.532465!10818-111B8;0.539334!10819-111B9;0.470506!10820-111C1;0.418083!10484-107A7;0.35335!10808-111A7;0.866119!10169-103B7;0.0275748!10153-102I9;0.868773!13425-144D5;0.697539!13433-144E4;0.611508!13437-144E8;0.611241!11904-125F5;0.472559!11905-125F6;0.509499!10039-101F3;0.413401!10791-110H8;0.754358!10017-101C8;0.792345!10045-101F9;0.00573764!10509-107D5;0.0932564!10839-111E2;0.304093!10692-109F8;0.259823!10079-102A7;0.874298!10078-102A6;0.19517!10721-110A1;0.278042!10569-108B2;0.38366!10570-108B3;0.422314!10571-108B4;0.300694!10647-109A8;0.552614!10752-110D5;0.912111!10782-110G8;0.117913!10726-110A6;0.996659!10018-101C9;0.0860879!10086-102B5;0.593298!10182-103D2;0.920913!10165-103B3;0.876637!10499-107C4;0.825463!10408-106B3;0.644535!10019-101D1;0.649719!10068-101I5;0.245219!10075-102A3;0.609701!10077-102A5;0.357567!10727-110A7;0.911092!10775-110G1;0.0315366!10412-106B7;0.0765621!12231-129F8;0.146708!12232-129F9;0.043687!12233-129G1;0.238498!12234-129G2;0.183691!10414-106B9;0.0583829!10170-103B8;0.898563!10183-103D3;0.988035!10150-102I6;0.900304!10174-103C3;0.925581!10155-103A2;0.58173!10038-101F2;0.636077!10838-111E1;0.47849!10759-110E3;0.118329!10514-107E1;0.01548!10465-106H6;0.774288!10691-109F7;0.502479!10843-111E6;0.309865!10844-111E7;0.200819!11747-123G1;0.878431!11748-123G2;0.928468!11749-123G3;0.56021!11750-123G4;0.861137!11751-123G5;0.279902!11840-124H4;0.0909816!11752-123G6;0.185073!11753-123G7;0.990113!11754-123G8;0.645689!11755-123G9;0.681865!11756-123H1;0.533856!11833-124G6;0.380543!11760-123H5;0.172542!11836-124G9;0.359098!11758-123H3;0.625705!11835-124G8;0.146117!11762-123H7;0.191129!11838-124H2;0.357446!11757-123H2;0.198281!11759-123H4;0.297604!11761-123H6;0.444141!11842-124H6;0.0470817!11837-124H1;0.482308!10568-108B1;0.334148!13230-141I8;0.612196!13231-141I9;0.191443!10696-109G3;0.153368!10493-107B7;0.708595!10494-107B8;0.81686!10850-111F4;0.241136!10851-111F5;0.920196!10852-111F6;0.831494!10853-111F7;0.915765!10854-111F8;0.60703!10855-111F9;0.519307!10856-111G1;0.698432!10847-111F1;0.856974!10846-111E9;0.460449!10848-111F2;0.79058!10845-111E8;0.603524!10857-111G2;0.745253!10858-111G3;0.843439!10156-103A3;0.158989!11901-125F2;0.905673!11902-125F3;0.803201!11903-125F4;0.857827!10689-109F5;0.797961!10648-109A9;0.251219!10784-110H1;0.592697!10744-110C6;0.176511!10772-110F7;0.00687519!10474-106I6;0.00570704!10600-108E6;0.845468!10684-109E9;0.0804735!12226-129F3;0.117395!12227-129F4;0.316944!10508-107D4;0.251176!10539-107G8;0.0690232!10607-108F4;0.188788!10555-107I6;0.0381319!10774-110F9;0.037329!10637-108I7;0.0118333!10663-109C6;0.0323731!10728-110A8;0.0369864!10729-110A9;0.0250996!10430-106D7;0.468626!10730-110B1;0.068379!10813-111B3;0.427805!10812-111B2;0.932727!10037-101F1;0.618149!10172-103C1;0.773757!10163-103B1;0.926994!10076-102A4;0.927501!10073-102A1;0.908987!10036-101E9;0.894444!10195-103E6;0.842513!10277-104E7;0.82751!10434-106E2;0.421761!10550-107I1;0.441286!10545-107H5;0.640687!10544-107H4;0.261516!10704-109H2;0.892478!10510-107D6;0.583431!10558-107I9;0.0356537!10020-101D2;0.0598035!10732-110B3;0.463851!10049-101G4;0.115151!10698-109G5;0.195511!10437-106E5;0.19935!10417-106C3;0.146046!10035-101E8;0.213778!10171-103B9;0.827052!10157-103A4;0.925516!10034-101E7;0.956734!10072-101I9;0.793175!10199-103F1;0.886489!10200-103F2;1.33311e-05!10697-109G4;0.0410165!10723-110A3;0.0918195!10179-103C8;0.00709218!10160-103A7;0.616203!10180-103C9;0.525701!10162-103A9;0.541621!10021-101D3;0.604706!10840-111E3;0.397927!10706-109H4;0.0782949!10033-101E6;0.823439!10032-101E5;0.690784!10490-107B4;0.767707!10439-106E7;0.768823!10022-101D4;0.954774!10176-103C5;0.159846!10469-106I1;0.96205!10067-101I4;0.68191!10411-106B6;0.741104!10471-106I3;0.400104!10030-101E3;0.638259!10475-106I7;0.2418!10787-110H4;0.137668!10477-106I9;0.354495!10695-109G2;0.13725!11771-123I7;0.757563!11772-123I8;0.99806!11773-123I9;0.668179!10093-102C3;0.566347!10442-106F1;6.73096e-07!10442-106F1;0.923934!10201-103F3;0.892068!10639-108I9;0.0699977!11843-124H7;0.873005!11841-124H5;0.700052!10693-109F9;0.313639!10436-106E4;0.621367!10483-107A6;0.213435!10282-104F3;0.759901!10023-101D5;0.00770466!10066-101I3;0.010232!10065-101I2;0.0400745!10800-110I8;0.0788403!10610-108F7;0.584033!10841-111E4;0.519289!10541-107H1;0.0398897!10842-111E5;0.356562!10562-108A4;0.0369332!10024-101D6;0.934349!10064-101I1;0.0628864!10609-108F6;0.172535!10048-101G3;0.274655!10781-110G7;0.910794!10181-103D1;0.960197!10159-103A6;0.686938!10056-101H2;0.530308!10737-110B8;0.406822!10025-101D7;0.272775!10044-101F8;0.579678!10424-106D1;0.602465!10463-106H4;0.109027!10616-108G4;0.249329!10486-107A9;0.724274!10062-101H8;0.29793!10202-103F4;0.301989!10158-103A5;0.000449739!10441-106E9;0.35789!10031-101E4;0.0359031!10063-101H9;0.718109!10063-101H9;0.922156!11763-123H8;0.34815!11765-123I1;0.449558!11768-123I4;0.591219!10807-111A6;0.293696!10790-110H7;0.122037!10798-110I6;0.334334!10786-110H3;0.118223!10591-108D6;0.458173!10593-108D8;0.188954!10590-108D5;0.259131!10026-101D8;0.104494!10096-102C6;0.600665!10168-103B6;0.418358!10154-103A1;0.967506!10209-103G2;0.76506!10061-101H7;0.0216857!10027-101D9;0.0301797!10043-101F7;0.876146!10783-110G9;0.745515!10028-101E1;0.20719!10060-101H6;0.0105533!10203-103F5;0.0204197!10059-101H5;0.0227211!10047-101G2;0.0109678!10029-101E2;0.0535451!10058-101H4;0.0393718!10418-106C4;0.0106031!10492-107B6;0.3374!10694-109G1;0.541547!10797-110I5;0.453441!10057-101H3;0.683904!10100-102D1;0.0446015!10055-101H1;0.441521!10204-103F6;0.518977!10191-103E2;0.789054!10563-108A5;0.311213
|name=motif_TCAGNT
|name=motif_TCAGNT
|tomtom_result=ARR1#MA0274.1;2;0.0025096;1.19457;1;6;TCAGAT;ATTCAAGT;-!HAP4#MA0315.1;5;0.0141171;6.71976;1;6;TCAGAT;ACCAATCAGAGGCGA;+!sna#MA0086.1;-1;0.0141926;6.75567;1;5;TCAGAT;CAGGTG;+!HAP5#MA0316.1;5;0.0159426;7.58867;1;6;TCAGAT;ACCAATCAGATCCCA;-
}}
}}

Latest revision as of 13:00, 7 September 2012

Full Name: motif_TCAGNT

Motif matrix
POACGT
010002768
020276800
032768000
040027680
05692692692692
060002768

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARR1#MA0274.120.00250961.1945716TCAGATATTCAAGT-
HAP4#MA0315.150.01411716.7197616TCAGATACCAATCAGAGGCGA+
sna#MA0086.1-10.01419266.7556715TCAGATCAGGTG+
HAP5#MA0316.150.01594267.5886716TCAGATACCAATCAGATCCCA-
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