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MacroAPE 1083:Motif CTAGNT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;2304;0;0!02;0;0;0;2304!03;2304;0;0;0!04;0;0;2304;0!05;576;576;576;576!06;0;0;0;2304 |macroape_1083_sample_pvalues=11376-118A8;0.745457!1...")
 
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-111C9;0.902311!10788-110H5;0.505291!10792-110H9;0.879871!10765-110E9;0.754512!10829-111D1;0.96403!10830-111D2;0.906725!10831-111D3;0.607455!10832-111D4;0.63594!10833-111D5;0.982792!10764-110E8;0.782385!10770-110F5;0.421555!10399-106A3;0.856682!10400-106A4;0.609344!10405-106A9;0.535762!10834-111D6;0.54909!10835-111D7;0.983888!10836-111D8;0.717563!10837-111D9;0.909806!10699-109G6;0.603462!10802-111A1;0.636645!10796-110I4;0.296793!10010-101C1;0.139928!10810-111A9;0.785432!10421-106C7;0.400524!10708-109H6;0.669647!12235-129G3;0.618903!12236-129G4;0.0497768!12237-129G5;0.12273!10167-103B5;0.0266704!10151-102I7;0.63325!10428-106D5;0.662818!10795-110I3;0.395554!10805-111A4;0.803223!10052-101G7;0.350868!10189-103D9;0.626231!10589-108D4;0.580237!10425-106D2;0.321877!10427-106D4;0.144334!10702-109G9;0.42905!10432-106D9;0.150709!10496-107C1;0.121359!10718-109I7;0.869495!10011-101C2;0.717795!10053-101G8;0.804435!10686-109F2;0.756005!10084-102B3;0.755703!10012-101C3;0.648448!10085-102B4;0.702919!10482-107A5;0.509799!10419-106C5;0.674029!10080-102A8;0.997628!10760-110E4;0.474998!10709-109H7;0.528974!10710-109H8;0.988545!10703-109H1;0.250935!10719-109I8;0.722786!10642-109A3;0.754425!10177-103C6;0.666396!10164-103B2;0.515617!10173-103C2;0.742105!10166-103B4;0.827605!10083-102B2;0.842407!10188-103D8;0.736569!10552-107I3;0.756864!10553-107I4;0.51796!10013-101C4;0.45114!10536-107G5;0.939536!10618-108G6;0.654342!10423-106C9;0.00993538!10785-110H2;0.0155893!12238-129G6;0.00653369!12239-129G7;0.0565719!12240-129G8;0.599557!10416-106C2;0.0530773!10801-110I9;0.94949!10766-110F1;0.742841!10824-111C5;0.311104!10825-111C6;0.571555!10826-111C7;0.646425!10454-106G4;0.652289!10409-106B4;0.833344!10638-108I8;0.624799!10636-108I6;0.641637!10513-107D9;0.110075!10420-106C6;0.027276!10082-102B1;0.316942!10014-101C5;0.687294!10070-101I7;0.804263!10452-106G2;0.835566!10453-106G3;0.720587!10449-106F8;0.954883!10042-101F6;0.931583!10069-101I6;0.717944!10193-103E4;0.466951!10631-108I1;0.724257!10438-106E6;0.853158!10488-107B2;0.177675!10196-103E7;0.881477!10071-101I8;0.67297!10071-101I8;0.360135!10041-101F5;0.613888!10451-106G1;0.885471!10450-106F9;0.698226!10604-108F1;0.520011!10605-108F2;0.488794!10606-108F3;0.422627!10603-108E9;0.460399!10497-107C2;0.431087!10448-106F7;0.121274!10643-109A4;0.789458!10426-106D3;0.334637!10431-106D8;0.311403!10197-103E8;0.188733!10443-106F2;0.673516!10815-111B5;0.759941!10816-111B6;0.616307!10817-111B7;0.545558!10015-101C6;0.525387!10410-106B5;0.965656!10054-101G9;0.0944212!10758-110E2;0.629591!10711-109H9;0.435159!10040-101F4;0.742623!10470-106I2;0.82537!10415-106C1;0.0287317!10198-103E9;0.592232!10614-108G2;0.743905!10612-108F9;0.281186!10549-107H9;0.277021!10615-108G3;0.400699!10487-107B1;0.770708!10433-106E1;0.568651!10688-109F4;0.420705!10444-106F3;0.15712!10444-106F3;0.830644!10485-107A8;0.643909!10413-106B8;0.708954!10175-103C4;0.736755!10161-103A8;0.627942!12131-128D7;0.835667!10624-108H3;0.220014!10712-109I1;0.25613!10205-103F7;0.491475!10206-103F8;0.585688!10207-103F9;0.601233!10050-101G5;0.59732!10051-101G6;0.716419!10016-101C7;0.463887!10046-101G1;0.609482!10778-110G4;0.551162!10633-108I3;0.246803!10818-111B8;0.0237031!10819-111B9;0.489692!10820-111C1;0.522463!10484-107A7;0.511764!10808-111A7;0.251612!10169-103B7;0.788345!10153-102I9;0.594393!13425-144D5;0.690853!13433-144E4;0.622862!13437-144E8;0.670362!11904-125F5;0.80897!11905-125F6;0.652102!10039-101F3;0.14959!10791-110H8;0.770481!10017-101C8;0.333619!10045-101F9;0.480363!10509-107D5;0.67929!10839-111E2;0.652145!10692-109F8;0.859049!10079-102A7;0.491983!10078-102A6;0.578544!10721-110A1;0.483343!10569-108B2;0.783185!10570-108B3;0.274263!10571-108B4;0.104723!10647-109A8;0.129459!10752-110D5;0.428493!10782-110G8;0.680128!10726-110A6;0.0157904!10018-101C9;0.384433!10086-102B5;0.436548!10182-103D2;0.31585!10165-103B3;0.545217!10499-107C4;0.602765!10408-106B3;0.423618!10019-101D1;0.0407699!10068-101I5;0.416964!10075-102A3;0.694509!10077-102A5;0.374175!10727-110A7;0.304362!10775-110G1;0.991742!10412-106B7;0.78699!12231-129F8;0.564617!12232-129F9;0.193753!12233-129G1;0.638128!12234-129G2;0.353856!10414-106B9;0.114842!10170-103B8;0.147874!10183-103D3;0.735281!10150-102I6;0.557426!10174-103C3;0.760158!10155-103A2;0.467483!10038-101F2;0.755091!10838-111E1;0.693887!10759-110E3;0.661793!10514-107E1;0.694687!10465-106H6;0.471401!10691-109F7;0.907134!10843-111E6;0.725008!10844-111E7;0.956064!11747-123G1;0.883703!11748-123G2;0.356541!11749-123G3;0.52291!11750-123G4;0.736563!11751-123G5;0.366887!11840-124H4;0.340403!11752-123G6;0.3244!11753-123G7;0.875677!11754-123G8;0.339499!11755-123G9;0.626759!11756-123H1;0.54481!11833-124G6;0.352782!11760-123H5;0.306896!11836-124G9;0.437371!11758-123H3;0.794574!11835-124G8;0.553623!11762-123H7;0.129616!11838-124H2;0.065412!11757-123H2;0.0748285!11759-123H4;0.129811!11761-123H6;0.0776057!11842-124H6;0.452635!11837-124H1;0.203762!10568-108B1;0.0710913!13230-141I8;0.167726!13231-141I9;0.198789!10696-109G3;0.247887!10493-107B7;0.611444!10494-107B8;0.296665!10850-111F4;0.606289!10851-111F5;0.750201!10852-111F6;0.945071!10853-111F7;0.836459!10854-111F8;0.727083!10855-111F9;0.413917!10856-111G1;0.499747!10847-111F1;0.830491!10846-111E9;0.588463!10848-111F2;0.611683!10845-111E8;0.914388!10857-111G2;0.256251!10858-111G3;0.80164!10156-103A3;0.778819!11901-125F2;0.691501!11902-125F3;0.782501!11903-125F4;0.384717!10689-109F5;0.373862!10648-109A9;0.967887!10784-110H1;0.160311!10744-110C6;0.208311!10772-110F7;0.661685!10474-106I6;0.624839!10600-108E6;0.839616!10684-109E9;0.913493!12226-129F3;0.595181!12227-129F4;0.0474135!10508-107D4;0.71699!10539-107G8;0.962498!10607-108F4;0.330767!10555-107I6;0.538564!10774-110F9;0.424821!10637-108I7;0.642008!10663-109C6;0.939321!10728-110A8;0.706003!10729-110A9;0.278917!10430-106D7;0.485105!10730-110B1;0.885609!10813-111B3;0.959035!10812-111B2;0.771833!10037-101F1;0.075265!10172-103C1;0.79894!10163-103B1;0.608354!10076-102A4;0.798651!10073-102A1;0.768723!10036-101E9;0.466521!10195-103E6;0.951405!10277-104E7;0.565829!10434-106E2;0.914604!10550-107I1;0.448842!10545-107H5;0.676639!10544-107H4;0.353383!10704-109H2;0.198662!10510-107D6;0.954214!10558-107I9;0.610687!10020-101D2;0.388038!10732-110B3;0.812996!10049-101G4;0.207531!10698-109G5;0.14818!10437-106E5;0.00547863!10417-106C3;0.940805!10035-101E8;0.0254269!10171-103B9;0.826452!10157-103A4;0.635245!10034-101E7;0.734765!10072-101I9;0.824185!10199-103F1;0.513453!10200-103F2;0.940093!10697-109G4;0.783745!10723-110A3;0.104835!10179-103C8;0.258917!10160-103A7;0.543946!10180-103C9;0.725345!10162-103A9;0.453969!10021-101D3;0.803773!10840-111E3;0.120356!10706-109H4;0.874404!10033-101E6;0.622717!10032-101E5;0.656433!10490-107B4;0.819782!10439-106E7;0.397498!10022-101D4;0.319783!10176-103C5;0.861814!10469-106I1;0.719149!10067-101I4;0.0128834!10411-106B6;0.775377!10471-106I3;0.70639!10030-101E3;0.783988!10475-106I7;0.994367!10787-110H4;0.690025!10477-106I9;0.387621!10695-109G2;0.242556!11771-123I7;0.975302!11772-123I8;0.498216!11773-123I9;0.417086!10093-102C3;0.187915!10442-106F1;0.672948!10442-106F1;0.870743!10201-103F3;0.861423!10639-108I9;0.973646!11843-124H7;0.255584!11841-124H5;0.435469!10693-109F9;0.793393!10436-106E4;0.141301!10483-107A6;0.192386!10282-104F3;0.836175!10023-101D5;0.557788!10066-101I3;0.447511!10065-101I2;0.268315!10800-110I8;0.532104!10610-108F7;0.174869!10841-111E4;0.653737!10541-107H1;0.134227!10842-111E5;0.620877!10562-108A4;0.404749!10024-101D6;0.88179!10064-101I1;0.566753!10609-108F6;0.416499!10048-101G3;0.233918!10781-110G7;0.921113!10181-103D1;0.681692!10159-103A6;0.578015!10056-101H2;0.646532!10737-110B8;0.611715!10025-101D7;0.528491!10044-101F8;0.450029!10424-106D1;0.825348!10463-106H4;0.913741!10616-108G4;0.552519!10486-107A9;0.525926!10062-101H8;0.584499!10202-103F4;0.983569!10158-103A5;0.697825!10441-106E9;0.677134!10031-101E4;0.448785!10063-101H9;0.794709!10063-101H9;0.642144!11763-123H8;0.392233!11765-123I1;0.229714!11768-123I4;0.311476!10807-111A6;0.501813!10790-110H7;0.333141!10798-110I6;0.817999!10786-110H3;0.829473!10591-108D6;0.330594!10593-108D8;0.565519!10590-108D5;0.318778!10026-101D8;0.290726!10096-102C6;0.572618!10168-103B6;0.183971!10154-103A1;0.624254!10209-103G2;0.77276!10061-101H7;0.83766!10027-101D9;0.644852!10043-101F7;0.55962!10783-110G9;0.688086!10028-101E1;0.811594!10060-101H6;0.563814!10203-103F5;0.663615!10059-101H5;0.699643!10047-101G2;0.56336!10029-101E2;0.939735!10058-101H4;0.891896!10418-106C4;0.690907!10492-107B6;0.367512!10694-109G1;0.779524!10797-110I5;0.93792!10057-101H3;0.819255!10100-102D1;0.413502!10055-101H1;0.891099!10204-103F6;0.950594!10191-103E2;0.36133!10563-108A5;0.57927
|name=motif_CTAGNT
|name=motif_CTAGNT
|tomtom_result=T#MA0009.1;0;0.00329938;1.5705;1;6;CTAGAT;CTAGGTGTGAA;+!kni#MA0451.1;5;0.00734825;3.49777;1;6;CTAGAT;GTGCTCTAGTTT;-!ABF2#MA0266.1;1;0.00825847;3.93103;1;6;CTAGAT;TCTAGAG;-!RORA_2#MA0072.1;5;0.0127144;6.05207;1;6;CTAGAT;TTGACCTACTTATA;-
}}
}}

Latest revision as of 12:57, 7 September 2012

Full Name: motif_CTAGNT

Motif matrix
POACGT
010230400
020002304
032304000
040023040
05576576576576
060002304

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
T#MA0009.100.003299381.570516CTAGATCTAGGTGTGAA+
kni#MA0451.150.007348253.4977716CTAGATGTGCTCTAGTTT-
ABF2#MA0266.110.008258473.9310316CTAGATTCTAGAG-
RORA_2#MA0072.150.01271446.0520716CTAGATTTGACCTACTTATA-
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