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MacroAPE 1083:Motif TCAANG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;800!02;0;800;0;0!03;800;0;0;0!04;800;0;0;0!05;200;200;200;200!06;0;0;800;0 |macroape_1083_sample_pvalues=11376-118A8;0.501949!11327-...")
 
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56!10789-110H6;0.96008!10828-111C9;0.331533!10788-110H5;0.147856!10792-110H9;0.71901!10765-110E9;0.99796!10829-111D1;0.632079!10830-111D2;0.241654!10831-111D3;0.576575!10832-111D4;0.64346!10833-111D5;0.668072!10764-110E8;0.979556!10770-110F5;0.803091!10399-106A3;0.947845!10400-106A4;0.550752!10405-106A9;0.593238!10834-111D6;0.53734!10835-111D7;0.449042!10836-111D8;0.655977!10837-111D9;0.760662!10699-109G6;0.417163!10802-111A1;0.536355!10796-110I4;0.906751!10010-101C1;0.388667!10810-111A9;0.597593!10421-106C7;0.497858!10708-109H6;0.0822115!12235-129G3;0.391082!12236-129G4;0.171652!12237-129G5;0.578259!10167-103B5;0.113735!10151-102I7;0.999032!10428-106D5;0.971735!10795-110I3;0.249776!10805-111A4;0.14677!10052-101G7;0.662622!10189-103D9;0.456809!10589-108D4;0.350042!10425-106D2;0.658155!10427-106D4;0.0412305!10702-109G9;0.09655!10432-106D9;0.942699!10496-107C1;0.896127!10718-109I7;0.882316!10011-101C2;0.404744!10053-101G8;0.445022!10686-109F2;0.289195!10084-102B3;0.552602!10012-101C3;0.368306!10085-102B4;0.831996!10482-107A5;0.778139!10419-106C5;0.529365!10080-102A8;0.918237!10760-110E4;0.617727!10709-109H7;0.599943!10710-109H8;0.708906!10703-109H1;0.701505!10719-109I8;0.990471!10642-109A3;0.439702!10177-103C6;0.70796!10164-103B2;0.866946!10173-103C2;0.983841!10166-103B4;0.738701!10083-102B2;0.777567!10188-103D8;0.963476!10552-107I3;0.771411!10553-107I4;0.90287!10013-101C4;0.347771!10536-107G5;0.629853!10618-108G6;0.109879!10423-106C9;0.758689!10785-110H2;0.284518!12238-129G6;0.204093!12239-129G7;0.289975!12240-129G8;0.237347!10416-106C2;0.79442!10801-110I9;0.75998!10766-110F1;0.811153!10824-111C5;0.969793!10825-111C6;0.667344!10826-111C7;0.716913!10454-106G4;0.689486!10409-106B4;0.616696!10638-108I8;0.939297!10636-108I6;0.855278!10513-107D9;0.965976!10420-106C6;0.336603!10082-102B1;0.248825!10014-101C5;0.110624!10070-101I7;0.502853!10452-106G2;0.958789!10453-106G3;0.265429!10449-106F8;0.432953!10042-101F6;0.367254!10069-101I6;0.895115!10193-103E4;0.821696!10631-108I1;0.687272!10438-106E6;0.715175!10488-107B2;0.334853!10196-103E7;0.734659!10071-101I8;0.33896!10071-101I8;0.804176!10041-101F5;0.691214!10451-106G1;0.825066!10450-106F9;0.99169!10604-108F1;0.606301!10605-108F2;0.785595!10606-108F3;0.270838!10603-108E9;0.424457!10497-107C2;0.290554!10448-106F7;0.99183!10643-109A4;0.799459!10426-106D3;0.978472!10431-106D8;0.428289!10197-103E8;0.423277!10443-106F2;0.896011!10815-111B5;0.813887!10816-111B6;0.43304!10817-111B7;0.599031!10015-101C6;0.547789!10410-106B5;0.320854!10054-101G9;0.372688!10758-110E2;0.915859!10711-109H9;0.075398!10040-101F4;0.41285!10470-106I2;0.862917!10415-106C1;0.913315!10198-103E9;0.504063!10614-108G2;0.558594!10612-108F9;0.594496!10549-107H9;0.450805!10615-108G3;0.214432!10487-107B1;0.75301!10433-106E1;0.851858!10688-109F4;0.757693!10444-106F3;0.70008!10444-106F3;0.923237!10485-107A8;0.853266!10413-106B8;0.231295!10175-103C4;0.567733!10161-103A8;0.964078!12131-128D7;0.967991!10624-108H3;0.10918!10712-109I1;0.665562!10205-103F7;0.579648!10206-103F8;0.566371!10207-103F9;0.669073!10050-101G5;0.385778!10051-101G6;0.7769!10016-101C7;0.969005!10046-101G1;0.702227!10778-110G4;0.886093!10633-108I3;0.732341!10818-111B8;0.136506!10819-111B9;0.443629!10820-111C1;0.350494!10484-107A7;0.431811!10808-111A7;0.785152!10169-103B7;0.960424!10153-102I9;0.873722!13425-144D5;0.901864!13433-144E4;0.608692!13437-144E8;0.776453!11904-125F5;0.614083!11905-125F6;0.216916!10039-101F3;0.0823281!10791-110H8;0.815981!10017-101C8;0.170075!10045-101F9;0.942409!10509-107D5;0.484042!10839-111E2;0.664575!10692-109F8;0.407361!10079-102A7;0.747318!10078-102A6;0.869931!10721-110A1;0.96578!10569-108B2;0.746358!10570-108B3;0.344875!10571-108B4;0.132512!10647-109A8;0.161627!10752-110D5;0.724618!10782-110G8;0.423691!10726-110A6;0.293965!10018-101C9;0.0923911!10086-102B5;0.867389!10182-103D2;0.990005!10165-103B3;0.79533!10499-107C4;0.880838!10408-106B3;0.82749!10019-101D1;0.375547!10068-101I5;0.84007!10075-102A3;0.648413!10077-102A5;0.930846!10727-110A7;0.365378!10775-110G1;0.347962!10412-106B7;0.360163!12231-129F8;0.489428!12232-129F9;0.223369!12233-129G1;0.359836!12234-129G2;0.140391!10414-106B9;0.336949!10170-103B8;0.861411!10183-103D3;0.916548!10150-102I6;0.785679!10174-103C3;0.979077!10155-103A2;0.941936!10038-101F2;0.802563!10838-111E1;0.752188!10759-110E3;0.31411!10514-107E1;0.436368!10465-106H6;0.12061!10691-109F7;0.133131!10843-111E6;0.458968!10844-111E7;0.606406!11747-123G1;0.578727!11748-123G2;0.21857!11749-123G3;0.640026!11750-123G4;0.701765!11751-123G5;0.515503!11840-124H4;0.750384!11752-123G6;0.448992!11753-123G7;0.869127!11754-123G8;0.351793!11755-123G9;0.123767!11756-123H1;0.207489!11833-124G6;0.100245!11760-123H5;0.88706!11836-124G9;0.284781!11758-123H3;0.0383088!11835-124G8;0.2858!11762-123H7;0.441182!11838-124H2;0.942799!11757-123H2;0.778559!11759-123H4;0.16985!11761-123H6;0.0486606!11842-124H6;0.669555!11837-124H1;0.637347!10568-108B1;0.195572!13230-141I8;0.0406041!13231-141I9;0.706778!10696-109G3;0.860169!10493-107B7;0.655864!10494-107B8;0.680131!10850-111F4;0.970006!10851-111F5;0.173204!10852-111F6;0.522572!10853-111F7;0.770063!10854-111F8;0.180232!10855-111F9;0.358812!10856-111G1;0.0730331!10847-111F1;0.823644!10846-111E9;0.0937933!10848-111F2;0.64407!10845-111E8;0.413566!10857-111G2;0.319991!10858-111G3;0.24754!10156-103A3;0.267347!11901-125F2;0.892136!11902-125F3;0.184644!11903-125F4;0.12199!10689-109F5;0.063409!10648-109A9;0.990567!10784-110H1;0.75716!10744-110C6;0.906239!10772-110F7;0.670714!10474-106I6;0.537264!10600-108E6;0.142226!10684-109E9;0.361783!12226-129F3;0.405746!12227-129F4;0.00376379!10508-107D4;0.647943!10539-107G8;0.623534!10607-108F4;0.271646!10555-107I6;0.780194!10774-110F9;0.379129!10637-108I7;0.949684!10663-109C6;0.519163!10728-110A8;0.297956!10729-110A9;0.928481!10430-106D7;0.483429!10730-110B1;0.330912!10813-111B3;0.456802!10812-111B2;0.5708!10037-101F1;0.561136!10172-103C1;0.816568!10163-103B1;0.713198!10076-102A4;0.897387!10073-102A1;0.596502!10036-101E9;0.740799!10195-103E6;0.596903!10277-104E7;0.840399!10434-106E2;0.689861!10550-107I1;0.608983!10545-107H5;0.959383!10544-107H4;0.555753!10704-109H2;0.976407!10510-107D6;0.930061!10558-107I9;0.470856!10020-101D2;0.459226!10732-110B3;0.641321!10049-101G4;0.913095!10698-109G5;0.155857!10437-106E5;0.281727!10417-106C3;0.107099!10035-101E8;0.792835!10171-103B9;0.750582!10157-103A4;0.893815!10034-101E7;0.839386!10072-101I9;0.791412!10199-103F1;0.521931!10200-103F2;0.0187896!10697-109G4;0.72028!10723-110A3;0.451668!10179-103C8;0.106472!10160-103A7;0.843718!10180-103C9;0.82809!10162-103A9;0.929894!10021-101D3;0.893011!10840-111E3;0.91282!10706-109H4;0.398166!10033-101E6;0.907495!10032-101E5;0.70339!10490-107B4;0.694304!10439-106E7;0.903086!10022-101D4;0.884383!10176-103C5;0.240622!10469-106I1;0.924413!10067-101I4;0.738556!10411-106B6;0.916643!10471-106I3;0.284046!10030-101E3;0.507711!10475-106I7;0.551384!10787-110H4;0.475924!10477-106I9;0.0822!10695-109G2;0.328956!11771-123I7;0.673896!11772-123I8;0.911678!11773-123I9;0.416878!10093-102C3;0.0148727!10442-106F1;0.160929!10442-106F1;0.41524!10201-103F3;0.463879!10639-108I9;0.810097!11843-124H7;0.624303!11841-124H5;0.595115!10693-109F9;0.744217!10436-106E4;0.39032!10483-107A6;0.8047!10282-104F3;0.85259!10023-101D5;0.913052!10066-101I3;0.733404!10065-101I2;0.763099!10800-110I8;0.726089!10610-108F7;0.596236!10841-111E4;0.427741!10541-107H1;0.359243!10842-111E5;0.304907!10562-108A4;0.755935!10024-101D6;0.928655!10064-101I1;0.897966!10609-108F6;0.466887!10048-101G3;0.987867!10781-110G7;0.333031!10181-103D1;0.902156!10159-103A6;0.934056!10056-101H2;0.799363!10737-110B8;0.695821!10025-101D7;0.631026!10044-101F8;0.944535!10424-106D1;0.79311!10463-106H4;0.611869!10616-108G4;0.180015!10486-107A9;0.286715!10062-101H8;0.289704!10202-103F4;0.594021!10158-103A5;0.19001!10441-106E9;0.841079!10031-101E4;0.0678589!10063-101H9;0.668544!10063-101H9;0.636553!11763-123H8;0.818297!11765-123I1;0.999112!11768-123I4;0.15339!10807-111A6;0.775555!10790-110H7;0.611209!10798-110I6;0.921247!10786-110H3;0.193788!10591-108D6;0.870688!10593-108D8;0.578519!10590-108D5;0.768378!10026-101D8;0.763216!10096-102C6;0.329373!10168-103B6;0.56329!10154-103A1;0.897053!10209-103G2;0.933887!10061-101H7;0.665886!10027-101D9;0.657329!10043-101F7;0.48052!10783-110G9;0.421203!10028-101E1;0.448388!10060-101H6;0.287227!10203-103F5;0.752105!10059-101H5;0.762195!10047-101G2;0.796874!10029-101E2;0.25659!10058-101H4;0.245264!10418-106C4;0.710688!10492-107B6;0.744499!10694-109G1;0.272488!10797-110I5;0.188797!10057-101H3;0.585233!10100-102D1;0.673136!10055-101H1;0.703007!10204-103F6;0.907522!10191-103E2;0.124976!10563-108A5;0.477091
|name=motif_TCAANG
|name=motif_TCAANG
|tomtom_result=RXRA::VDR#MA0074.1;3;0.00288547;1.37348;1;6;TCAAAG;GGGTCAACGAGTTCA;+!pan#MA0237.1;2;0.00391598;1.864;1;6;TCAAAG;GATCAAAG;-!NR1H2::RXRA#MA0115.1;5;0.00509362;2.42456;1;6;TCAAAG;AAAGGTCAAAGGTCAAC;+!PPARG::RXRA#MA0065.1;7;0.00521071;2.4803;1;6;TCAAAG;CTAGGGGTCAAAGGTCATCG;+!exd#MA0222.1;2;0.00774113;3.68478;1;6;TCAAAG;TGTCAAAA;-!NR2F1#MA0017.1;4;0.0078715;3.74683;1;6;TCAAAG;AGGTTCAAAGGTCA;-!Esrrb#MA0141.1;3;0.00911343;4.33799;1;6;TCAAAG;AGCTCAAGGTCA;+!SOX10#MA0442.1;0;0.00918374;4.37146;1;6;TCAAAG;ACAAAG;-!TOS8#MA0408.1;3;0.0156297;7.43973;1;5;TCAAAG;CTGTCAAA;+
}}
}}

Latest revision as of 12:54, 7 September 2012

Full Name: motif_TCAANG

Motif matrix
POACGT
01000800
02080000
03800000
04800000
05200200200200
06008000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
RXRA::VDR#MA0074.130.002885471.3734816TCAAAGGGGTCAACGAGTTCA+
pan#MA0237.120.003915981.86416TCAAAGGATCAAAG-
NR1H2::RXRA#MA0115.150.005093622.4245616TCAAAGAAAGGTCAAAGGTCAAC+
PPARG::RXRA#MA0065.170.005210712.480316TCAAAGCTAGGGGTCAAAGGTCATCG+
exd#MA0222.120.007741133.6847816TCAAAGTGTCAAAA-
NR2F1#MA0017.140.00787153.7468316TCAAAGAGGTTCAAAGGTCA-
Esrrb#MA0141.130.009113434.3379916TCAAAGAGCTCAAGGTCA+
SOX10#MA0442.100.009183744.3714616TCAAAGACAAAG-
TOS8#MA0408.130.01562977.4397315TCAAAGCTGTCAAA+
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