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MacroAPE 1083:Motif679: Difference between revisions

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;0.99834!10828-111C9;0.926692!10788-110H5;0.910671!10792-110H9;0.43705!10765-110E9;0.937575!10829-111D1;0.962048!10830-111D2;0.923097!10831-111D3;0.705728!10832-111D4;0.464146!10833-111D5;0.940463!10764-110E8;0.869345!10770-110F5;0.744576!10399-106A3;0.80879!10400-106A4;0.73305!10405-106A9;0.930841!10834-111D6;0.815272!10835-111D7;0.730775!10836-111D8;0.57929!10837-111D9;0.625554!10699-109G6;0.664639!10802-111A1;0.433254!10796-110I4;0.336064!10010-101C1;0.097966!10810-111A9;0.0865396!10421-106C7;0.402407!10708-109H6;0.326926!12235-129G3;0.311853!12236-129G4;0.0397221!12237-129G5;0.00781434!10167-103B5;0.0429273!10151-102I7;0.502065!10428-106D5;0.824086!10795-110I3;0.696226!10805-111A4;0.76274!10052-101G7;0.296666!10189-103D9;0.230319!10589-108D4;0.224056!10425-106D2;0.479452!10427-106D4;0.27057!10702-109G9;0.619413!10432-106D9;0.976433!10496-107C1;0.633864!10718-109I7;0.46918!10011-101C2;0.705981!10053-101G8;0.378845!10686-109F2;0.419875!10084-102B3;0.0693422!10012-101C3;0.71766!10085-102B4;0.537098!10482-107A5;0.931481!10419-106C5;0.0148754!10080-102A8;0.00186211!10760-110E4;0.483922!10709-109H7;0.0360887!10710-109H8;0.218691!10703-109H1;0.311227!10719-109I8;0.284891!10642-109A3;0.25256!10177-103C6;0.25021!10164-103B2;0.521779!10173-103C2;0.766422!10166-103B4;0.9497!10083-102B2;0.993585!10188-103D8;0.884824!10552-107I3;0.620288!10553-107I4;0.50629!10013-101C4;0.018421!10536-107G5;0.642548!10618-108G6;0.948021!10423-106C9;0.0669301!10785-110H2;0.109985!12238-129G6;0.0352999!12239-129G7;0.408313!12240-129G8;0.829361!10416-106C2;0.468726!10801-110I9;0.626764!10766-110F1;0.849319!10824-111C5;0.875167!10825-111C6;0.55087!10826-111C7;0.57918!10454-106G4;0.591717!10409-106B4;0.595797!10638-108I8;0.676868!10636-108I6;0.128937!10513-107D9;0.223138!10420-106C6;0.201208!10082-102B1;0.0866583!10014-101C5;0.421895!10070-101I7;0.435558!10452-106G2;0.675444!10453-106G3;0.170285!10449-106F8;0.150016!10042-101F6;0.169225!10069-101I6;0.456363!10193-103E4;0.107661!10631-108I1;0.626159!10438-106E6;0.42877!10488-107B2;0.0384467!10196-103E7;0.288346!10071-101I8;0.465844!10071-101I8;0.384172!10041-101F5;0.846101!10451-106G1;0.161544!10450-106F9;0.122323!10604-108F1;0.14496!10605-108F2;0.215094!10606-108F3;0.373254!10603-108E9;0.229375!10497-107C2;0.150252!10448-106F7;0.0285015!10643-109A4;0.150254!10426-106D3;0.0910679!10431-106D8;0.0633886!10197-103E8;0.0811078!10443-106F2;0.34697!10815-111B5;0.33829!10816-111B6;0.651732!10817-111B7;0.560878!10015-101C6;0.612129!10410-106B5;0.39538!10054-101G9;0.197704!10758-110E2;0.436979!10711-109H9;0.928975!10040-101F4;0.440394!10470-106I2;0.596458!10415-106C1;0.0417709!10198-103E9;0.989636!10614-108G2;0.401124!10612-108F9;0.341237!10549-107H9;0.0716074!10615-108G3;0.14666!10487-107B1;0.301966!10433-106E1;0.478789!10688-109F4;0.597882!10444-106F3;0.0902994!10444-106F3;0.192815!10485-107A8;0.185721!10413-106B8;0.150145!10175-103C4;0.433819!10161-103A8;0.628155!12131-128D7;0.739395!10624-108H3;0.967868!10712-109I1;0.26375!10205-103F7;0.492677!10206-103F8;0.182091!10207-103F9;0.320352!10050-101G5;0.166681!10051-101G6;0.60442!10016-101C7;0.196324!10046-101G1;0.0773545!10778-110G4;0.166254!10633-108I3;0.0925085!10818-111B8;0.14588!10819-111B9;0.48794!10820-111C1;0.501975!10484-107A7;0.511507!10808-111A7;0.360447!10169-103B7;0.568389!10153-102I9;0.471241!13425-144D5;0.754894!13433-144E4;0.207217!13437-144E8;0.226539!11904-125F5;0.200713!11905-125F6;0.452113!10039-101F3;0.611209!10791-110H8;0.591922!10017-101C8;0.0459322!10045-101F9;0.811731!10509-107D5;0.695878!10839-111E2;0.265713!10692-109F8;0.132606!10079-102A7;0.138944!10078-102A6;0.152878!10721-110A1;0.151187!10569-108B2;0.367586!10570-108B3;0.423449!10571-108B4;0.556256!10647-109A8;0.788903!10752-110D5;0.625713!10782-110G8;0.903598!10726-110A6;0.839664!10018-101C9;0.130263!10086-102B5;0.151249!10182-103D2;0.121313!10165-103B3;0.615797!10499-107C4;0.660341!10408-106B3;0.0948463!10019-101D1;0.108996!10068-101I5;0.220913!10075-102A3;0.298745!10077-102A5;0.321011!10727-110A7;0.225128!10775-110G1;0.47579!10412-106B7;0.860587!12231-129F8;0.00731787!12232-129F9;0.818692!12233-129G1;0.87138!12234-129G2;0.782124!10414-106B9;0.385202!10170-103B8;0.160593!10183-103D3;0.749526!10150-102I6;0.771546!10174-103C3;0.851959!10155-103A2;0.575516!10038-101F2;0.461313!10838-111E1;0.313748!10759-110E3;0.248997!10514-107E1;0.257794!10465-106H6;0.272672!10691-109F7;0.467897!10843-111E6;0.920176!10844-111E7;0.31851!11747-123G1;0.37439!11748-123G2;0.937778!11749-123G3;0.768517!11750-123G4;0.104358!11751-123G5;0.204862!11840-124H4;0.148634!11752-123G6;0.155145!11753-123G7;0.156959!11754-123G8;0.41961!11755-123G9;0.172005!11756-123H1;0.13633!11833-124G6;0.517459!11760-123H5;0.361452!11836-124G9;0.749773!11758-123H3;0.247429!11835-124G8;0.141183!11762-123H7;0.421593!11838-124H2;0.74693!11757-123H2;0.880635!11759-123H4;0.367905!11761-123H6;0.0488343!11842-124H6;0.739907!11837-124H1;0.310858!10568-108B1;0.246595!13230-141I8;0.530053!13231-141I9;0.604342!10696-109G3;0.507244!10493-107B7;0.236605!10494-107B8;0.199146!10850-111F4;0.042276!10851-111F5;0.444298!10852-111F6;0.809502!10853-111F7;0.201981!10854-111F8;0.54306!10855-111F9;0.238404!10856-111G1;0.997489!10847-111F1;0.133232!10846-111E9;0.550441!10848-111F2;0.0786735!10845-111E8;0.374147!10857-111G2;0.118599!10858-111G3;0.289559!10156-103A3;0.547382!11901-125F2;0.861903!11902-125F3;0.972348!11903-125F4;0.959826!10689-109F5;0.833348!10648-109A9;0.297026!10784-110H1;0.540088!10744-110C6;0.22652!10772-110F7;0.46952!10474-106I6;0.356843!10600-108E6;0.771125!10684-109E9;0.988697!12226-129F3;0.364217!12227-129F4;0.0841502!10508-107D4;0.354941!10539-107G8;0.352213!10607-108F4;0.141222!10555-107I6;0.42489!10774-110F9;0.29962!10637-108I7;0.268313!10663-109C6;0.422183!10728-110A8;0.126393!10729-110A9;0.155874!10430-106D7;0.693943!10730-110B1;0.163106!10813-111B3;0.260726!10812-111B2;0.609453!10037-101F1;0.399482!10172-103C1;0.564535!10163-103B1;0.992781!10076-102A4;0.854168!10073-102A1;0.837682!10036-101E9;0.776146!10195-103E6;0.64236!10277-104E7;0.747983!10434-106E2;0.950876!10550-107I1;0.0542053!10545-107H5;0.0469725!10544-107H4;0.0275061!10704-109H2;0.0548027!10510-107D6;0.625694!10558-107I9;0.366533!10020-101D2;0.0726684!10732-110B3;0.353658!10049-101G4;0.568553!10698-109G5;0.310755!10437-106E5;0.115142!10417-106C3;0.411144!10035-101E8;0.114808!10171-103B9;0.613159!10157-103A4;0.827448!10034-101E7;0.806681!10072-101I9;0.64245!10199-103F1;0.909595!10200-103F2;0.656392!10697-109G4;0.187604!10723-110A3;0.77199!10179-103C8;0.0789966!10160-103A7;0.432008!10180-103C9;0.630924!10162-103A9;0.939122!10021-101D3;0.84854!10840-111E3;0.559962!10706-109H4;0.772132!10033-101E6;0.906416!10032-101E5;0.532262!10490-107B4;0.581085!10439-106E7;0.526671!10022-101D4;0.128142!10176-103C5;0.563532!10469-106I1;0.833523!10067-101I4;0.02329!10411-106B6;0.750886!10471-106I3;0.446589!10030-101E3;0.119849!10475-106I7;0.452067!10787-110H4;0.330589!10477-106I9;0.731925!10695-109G2;0.370781!11771-123I7;0.959306!11772-123I8;0.0330655!11773-123I9;0.0520626!10093-102C3;0.0911234!10442-106F1;0.600698!10442-106F1;0.747212!10201-103F3;0.686938!10639-108I9;0.505423!11843-124H7;0.0319102!11841-124H5;0.678005!10693-109F9;0.784144!10436-106E4;0.184035!10483-107A6;0.427515!10282-104F3;0.156653!10023-101D5;0.174952!10066-101I3;0.0237582!10065-101I2;0.201602!10800-110I8;0.414624!10610-108F7;0.204113!10841-111E4;0.362329!10541-107H1;0.40157!10842-111E5;0.121022!10562-108A4;0.333066!10024-101D6;0.555303!10064-101I1;0.479435!10609-108F6;0.513999!10048-101G3;0.135245!10781-110G7;0.715689!10181-103D1;0.0782435!10159-103A6;0.572294!10056-101H2;0.438575!10737-110B8;0.790973!10025-101D7;0.416787!10044-101F8;0.203517!10424-106D1;0.245472!10463-106H4;0.715173!10616-108G4;0.0103596!10486-107A9;0.445544!10062-101H8;0.262062!10202-103F4;0.706992!10158-103A5;0.538985!10441-106E9;0.539394!10031-101E4;0.300388!10063-101H9;0.504208!10063-101H9;0.732624!11763-123H8;0.243185!11765-123I1;0.644982!11768-123I4;0.559989!10807-111A6;0.436421!10790-110H7;0.191945!10798-110I6;0.191!10786-110H3;0.192884!10591-108D6;0.116324!10593-108D8;0.139006!10590-108D5;0.0123818!10026-101D8;0.165773!10096-102C6;0.60138!10168-103B6;0.407367!10154-103A1;0.58455!10209-103G2;0.819083!10061-101H7;0.1333!10027-101D9;0.221764!10043-101F7;0.849052!10783-110G9;0.492061!10028-101E1;0.828505!10060-101H6;0.975497!10203-103F5;0.664301!10059-101H5;0.232778!10047-101G2;0.23958!10029-101E2;0.255126!10058-101H4;0.172508!10418-106C4;0.202879!10492-107B6;0.023648!10694-109G1;0.283321!10797-110I5;0.673286!10057-101H3;0.0666286!10100-102D1;0.255892!10055-101H1;0.507795!10204-103F6;0.985887!10191-103E2;0.680199!10563-108A5;0.125343
|name=motif679
|name=motif679
|tomtom_result=SPIB#MA0081.1;1;0.00108495;0.516437;1;6;TCCTCTG;TTCCTCT;-!RME1#MA0370.1;1;0.00215504;1.0258;1;7;TCCTCTG;TTCCTTTGGA;-!TEAD1#MA0090.1;5;0.00381619;1.81651;1;7;TCCTCTG;CACATTCCTCCG;+!Trl#MA0205.1;1;0.0111916;5.32722;1;7;TCCTCTG;TTGCTCTCTC;+!MSN4#MA0342.1;-1;0.0156039;7.42746;1;5;TCCTCTG;CCCCT;-!RGM1#MA0366.1;-1;0.016573;7.88876;1;5;TCCTCTG;CCCCT;-!PPARG::RXRA#MA0065.2;2;0.0187975;8.94761;1;7;TCCTCTG;TGACCTTTGCCCTAC;-!RXR::RAR_DR5#MA0159.1;2;0.0191764;9.12796;1;7;TCCTCTG;TGACCTCTCCGTGACCT;-
}}
}}

Latest revision as of 12:51, 7 September 2012

Full Name: motif679

Motif matrix
POACGT
0115398276013211598395
02146917204000
0331531651127664478
04031651503168841
05126716252342725447
06358502243167681
079938545058030628760

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SPIB#MA0081.110.001084950.51643716TCCTCTGTTCCTCT-
RME1#MA0370.110.002155041.025817TCCTCTGTTCCTTTGGA-
TEAD1#MA0090.150.003816191.8165117TCCTCTGCACATTCCTCCG+
Trl#MA0205.110.01119165.3272217TCCTCTGTTGCTCTCTC+
MSN4#MA0342.1-10.01560397.4274615TCCTCTGCCCCT-
RGM1#MA0366.1-10.0165737.8887615TCCTCTGCCCCT-
PPARG::RXRA#MA0065.220.01879758.9476117TCCTCTGTGACCTTTGCCCTAC-
RXR::RAR_DR5#MA0159.120.01917649.1279617TCCTCTGTGACCTCTCCGTGACCT-
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