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MacroAPE 1083:Motif TGACNC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;2880!02;0;0;2880;0!03;2880;0;0;0!04;0;2880;0;0!05;720;720;720;720!06;0;2880;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.0169306!...")
 
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-128I8;0.842463!12182-129A4;0.629612!12183-129A5;0.315524!12184-129A6;0.39156!10809-111A8;0.493836!10597-108E3;0.943993!10717-109I6;0.936689!10455-106G5;0.828981!10534-107G3;0.372767!10429-106D6;0.236858!10464-106H5;0.531069!10827-111C8;0.302234!10789-110H6;0.530437!10828-111C9;0.720031!10788-110H5;0.921175!10792-110H9;0.52144!10765-110E9;0.639319!10829-111D1;0.620431!10830-111D2;0.96916!10831-111D3;0.660939!10832-111D4;0.473321!10833-111D5;0.60326!10764-110E8;0.556003!10770-110F5;0.561119!10399-106A3;0.731953!10400-106A4;0.774227!10405-106A9;0.719807!10834-111D6;0.887929!10835-111D7;0.540834!10836-111D8;0.536772!10837-111D9;0.693379!10699-109G6;0.567766!10802-111A1;0.404636!10796-110I4;0.427188!10010-101C1;0.218141!10810-111A9;0.776685!10421-106C7;0.616918!10708-109H6;0.348571!12235-129G3;0.906873!12236-129G4;0.129936!12237-129G5;0.171832!10167-103B5;0.119051!10151-102I7;0.254988!10428-106D5;0.166311!10795-110I3;0.937894!10805-111A4;0.678101!10052-101G7;0.260336!10189-103D9;0.662353!10589-108D4;0.227634!10425-106D2;0.738671!10427-106D4;0.710003!10702-109G9;0.681741!10432-106D9;0.449397!10496-107C1;0.733351!10718-109I7;0.0294987!10011-101C2;0.782122!10053-101G8;0.875604!10686-109F2;0.049108!10084-102B3;0.788351!10012-101C3;0.231114!10085-102B4;0.322952!10482-107A5;0.0981743!10419-106C5;0.122454!10080-102A8;0.439688!10760-110E4;0.96367!10709-109H7;0.942028!10710-109H8;0.752988!10703-109H1;0.829347!10719-109I8;0.371171!10642-109A3;0.152648!10177-103C6;0.225697!10164-103B2;0.278605!10173-103C2;0.192462!10166-103B4;0.331596!10083-102B2;0.262468!10188-103D8;0.309929!10552-107I3;0.434619!10553-107I4;0.307064!10013-101C4;0.139064!10536-107G5;0.294088!10618-108G6;0.233915!10423-106C9;0.753399!10785-110H2;0.723291!12238-129G6;0.551184!12239-129G7;0.239799!12240-129G8;0.065824!10416-106C2;0.852134!10801-110I9;0.209058!10766-110F1;0.626337!10824-111C5;0.94928!10825-111C6;0.65414!10826-111C7;0.616824!10454-106G4;0.588015!10409-106B4;0.73228!10638-108I8;0.699354!10636-108I6;0.665624!10513-107D9;0.570859!10420-106C6;0.846788!10082-102B1;0.969728!10014-101C5;0.302773!10070-101I7;0.684189!10452-106G2;0.239851!10453-106G3;0.136071!10449-106F8;0.746197!10042-101F6;0.998679!10069-101I6;0.255565!10193-103E4;0.822774!10631-108I1;0.224063!10438-106E6;0.308087!10488-107B2;0.319806!10196-103E7;0.0976821!10071-101I8;0.603238!10071-101I8;0.233978!10041-101F5;0.0561485!10451-106G1;0.585271!10450-106F9;0.169101!10604-108F1;0.823802!10605-108F2;0.190871!10606-108F3;0.184333!10603-108E9;0.0446686!10497-107C2;0.12357!10448-106F7;0.508905!10643-109A4;0.855899!10426-106D3;0.832803!10431-106D8;0.790935!10197-103E8;0.596602!10443-106F2;0.453121!10815-111B5;0.817137!10816-111B6;0.483095!10817-111B7;0.246376!10015-101C6;0.451326!10410-106B5;0.70876!10054-101G9;0.752393!10758-110E2;0.438055!10711-109H9;0.734226!10040-101F4;0.322947!10470-106I2;0.255518!10415-106C1;0.700528!10198-103E9;0.848019!10614-108G2;0.839433!10612-108F9;0.728263!10549-107H9;0.498924!10615-108G3;0.990667!10487-107B1;0.711664!10433-106E1;0.0737701!10688-109F4;0.0666712!10444-106F3;0.19568!10444-106F3;0.294077!10485-107A8;0.258655!10413-106B8;0.118929!10175-103C4;0.652867!10161-103A8;0.318403!12131-128D7;0.213108!10624-108H3;0.0264706!10712-109I1;0.0395788!10205-103F7;0.505448!10206-103F8;0.889299!10207-103F9;0.984824!10050-101G5;0.254503!10051-101G6;0.454762!10016-101C7;0.530628!10046-101G1;0.393261!10778-110G4;0.993579!10633-108I3;0.0940283!10818-111B8;0.42533!10819-111B9;0.981234!10820-111C1;0.999917!10484-107A7;0.998358!10808-111A7;0.173096!10169-103B7;0.97722!10153-102I9;0.209655!13425-144D5;0.174213!13433-144E4;0.184142!13437-144E8;0.196335!11904-125F5;0.215586!11905-125F6;0.000564514!10039-101F3;0.000134198!10791-110H8;0.227039!10017-101C8;0.334528!10045-101F9;0.507413!10509-107D5;0.376781!10839-111E2;0.146864!10692-109F8;0.0115059!10079-102A7;0.535817!10078-102A6;0.932432!10721-110A1;0.552313!10569-108B2;0.646106!10570-108B3;0.445141!10571-108B4;0.267749!10647-109A8;0.230869!10752-110D5;0.498677!10782-110G8;0.611783!10726-110A6;0.73381!10018-101C9;0.196659!10086-102B5;0.905246!10182-103D2;0.913077!10165-103B3;0.426878!10499-107C4;0.35549!10408-106B3;0.0339035!10019-101D1;0.975026!10068-101I5;0.930067!10075-102A3;0.38402!10077-102A5;0.543787!10727-110A7;0.569475!10775-110G1;0.390913!10412-106B7;0.223478!12231-129F8;0.518346!12232-129F9;0.0122993!12233-129G1;0.0435972!12234-129G2;0.0363166!10414-106B9;0.0354967!10170-103B8;0.408469!10183-103D3;0.328771!10150-102I6;0.266616!10174-103C3;0.249669!10155-103A2;0.338452!10038-101F2;0.342779!10838-111E1;0.394307!10759-110E3;0.333515!10514-107E1;0.18864!10465-106H6;0.178888!10691-109F7;0.897977!10843-111E6;0.947153!10844-111E7;0.0995407!11747-123G1;0.0924407!11748-123G2;0.210034!11749-123G3;0.729379!11750-123G4;0.265199!11751-123G5;0.754844!11840-124H4;0.326217!11752-123G6;0.313569!11753-123G7;0.273346!11754-123G8;0.819057!11755-123G9;0.759277!11756-123H1;0.416605!11833-124G6;0.686092!11760-123H5;0.50075!11836-124G9;0.138265!11758-123H3;0.533658!11835-124G8;0.34766!11762-123H7;0.510324!11838-124H2;0.916558!11757-123H2;0.796608!11759-123H4;0.348112!11761-123H6;0.784059!11842-124H6;0.726215!11837-124H1;0.88772!10568-108B1;0.501648!13230-141I8;0.0442165!13231-141I9;0.29778!10696-109G3;0.274812!10493-107B7;0.409265!10494-107B8;0.229338!10850-111F4;0.378578!10851-111F5;0.585126!10852-111F6;0.261693!10853-111F7;0.20812!10854-111F8;0.9146!10855-111F9;0.147482!10856-111G1;0.0636966!10847-111F1;0.218865!10846-111E9;0.226557!10848-111F2;0.870841!10845-111E8;0.772175!10857-111G2;0.465223!10858-111G3;0.673564!10156-103A3;0.835275!11901-125F2;0.211484!11902-125F3;0.142222!11903-125F4;0.0397898!10689-109F5;0.0785858!10648-109A9;0.906115!10784-110H1;0.285667!10744-110C6;0.0890237!10772-110F7;0.444347!10474-106I6;0.402833!10600-108E6;0.483428!10684-109E9;0.94455!12226-129F3;0.0592394!12227-129F4;0.0752816!10508-107D4;0.526718!10539-107G8;0.213357!10607-108F4;0.411255!10555-107I6;0.405158!10774-110F9;0.275145!10637-108I7;0.23144!10663-109C6;0.0560548!10728-110A8;0.426297!10729-110A9;0.34839!10430-106D7;0.0916385!10730-110B1;0.432858!10813-111B3;0.666859!10812-111B2;0.256543!10037-101F1;0.0204986!10172-103C1;0.242817!10163-103B1;0.351232!10076-102A4;0.231534!10073-102A1;0.320413!10036-101E9;0.0887055!10195-103E6;0.323308!10277-104E7;0.227047!10434-106E2;0.691782!10550-107I1;0.402947!10545-107H5;0.655909!10544-107H4;0.718847!10704-109H2;0.462531!10510-107D6;0.856776!10558-107I9;0.642407!10020-101D2;0.270051!10732-110B3;0.391514!10049-101G4;0.932022!10698-109G5;0.810828!10437-106E5;0.629823!10417-106C3;0.580023!10035-101E8;0.210665!10171-103B9;0.315559!10157-103A4;0.311112!10034-101E7;0.250942!10072-101I9;0.312576!10199-103F1;0.0766415!10200-103F2;0.607025!10697-109G4;0.953717!10723-110A3;0.531272!10179-103C8;0.341775!10160-103A7;0.695976!10180-103C9;0.231004!10162-103A9;0.672736!10021-101D3;0.71997!10840-111E3;0.729666!10706-109H4;0.927048!10033-101E6;0.403695!10032-101E5;0.385047!10490-107B4;0.320449!10439-106E7;0.40313!10022-101D4;0.393348!10176-103C5;0.33382!10469-106I1;0.283052!10067-101I4;0.107927!10411-106B6;0.0250168!10471-106I3;0.432487!10030-101E3;0.687739!10475-106I7;0.426348!10787-110H4;0.114235!10477-106I9;0.57675!10695-109G2;0.0230255!11771-123I7;0.505026!11772-123I8;0.884251!11773-123I9;0.815839!10093-102C3;0.39668!10442-106F1;0.545958!10442-106F1;0.200012!10201-103F3;0.175823!10639-108I9;0.847007!11843-124H7;0.24191!11841-124H5;0.20349!10693-109F9;0.586674!10436-106E4;0.314072!10483-107A6;0.0873839!10282-104F3;0.451102!10023-101D5;0.0247743!10066-101I3;0.0683761!10065-101I2;0.243341!10800-110I8;0.308552!10610-108F7;0.914608!10841-111E4;0.408051!10541-107H1;0.49495!10842-111E5;0.7156!10562-108A4;0.26203!10024-101D6;0.929558!10064-101I1;0.948956!10609-108F6;0.060136!10048-101G3;0.0491192!10781-110G7;0.671784!10181-103D1;3.02743e-05!10159-103A6;0.316781!10056-101H2;0.326615!10737-110B8;0.163213!10025-101D7;0.658572!10044-101F8;0.450573!10424-106D1;0.248437!10463-106H4;0.823483!10616-108G4;0.101548!10486-107A9;0.0664002!10062-101H8;0.102606!10202-103F4;0.769365!10158-103A5;0.583577!10441-106E9;0.339686!10031-101E4;0.183061!10063-101H9;0.272148!10063-101H9;0.0639594!11763-123H8;0.202171!11765-123I1;0.018463!11768-123I4;0.0471699!10807-111A6;0.0188293!10790-110H7;0.203928!10798-110I6;0.324451!10786-110H3;0.308412!10591-108D6;0.328637!10593-108D8;0.693149!10590-108D5;0.184304!10026-101D8;0.944723!10096-102C6;0.185303!10168-103B6;0.427612!10154-103A1;0.417996!10209-103G2;0.243966!10061-101H7;0.953924!10027-101D9;0.132409!10043-101F7;0.0156022!10783-110G9;0.152108!10028-101E1;0.312646!10060-101H6;0.924949!10203-103F5;0.758122!10059-101H5;0.721214!10047-101G2;0.967039!10029-101E2;0.468485!10058-101H4;0.753666!10418-106C4;0.38013!10492-107B6;0.957584!10694-109G1;0.384289!10797-110I5;0.388604!10057-101H3;0.115144!10100-102D1;0.516792!10055-101H1;0.291389!10204-103F6;0.00908944!10191-103E2;0.843821!10563-108A5;0.401917
|name=motif_TGACNC
|name=motif_TGACNC
|tomtom_result=ARG80#MA0271.1;0;0.000427399;0.203442;0.230999;6;TGACAC;AGACGC;+!AP1#MA0099.2;0;0.000660539;0.314416;0.230999;6;TGACAC;TGACTCA;+!ARG81#MA0272.1;1;0.000916729;0.436363;0.230999;6;TGACAC;GTGACTCT;+!NFE2L2#MA0150.1;1;0.000977021;0.465062;0.230999;6;TGACAC;ATGACTCAGCA;+!usp#MA0016.1;3;0.00177258;0.843746;0.280528;6;TGACAC;CCGTGACCCC;-!CUP9#MA0288.1;0;0.00180958;0.861359;0.280528;6;TGACAC;TGACACATT;+!Six4#MA0204.1;0;0.00207638;0.988359;0.280528;6;TGACAC;TGATAC;+!Mafb#MA0117.1;2;0.00267428;1.27296;0.316143;6;TGACAC;GCTGACGG;+!Fos#MA0099.1;0;0.0034507;1.64253;0.362603;6;TGACAC;TGACTCAC;-!vis#MA0252.1;0;0.00402148;1.91423;0.380323;6;TGACAC;TGACAG;+!BAS1#MA0278.1;6;0.00458661;2.18323;0.394335;6;TGACAC;TTGACTTGACTCTGGCTGTGC;-!RXRA::VDR#MA0074.1;9;0.00616837;2.93615;0.486134;6;TGACAC;TGAACCCGATGACCC;-!Pax2#MA0067.1;3;0.00841291;4.00455;0.568309;5;TGACAC;GCGTGACT;-!TOS8#MA0408.1;2;0.0104548;4.97646;0.659158;6;TGACAC;TTTGACAG;-!PPARG::RXRA#MA0065.1;10;0.0121839;5.79953;0.674081;6;TGACAC;AGATGACCTTTGACCCCTGA;-!GCN4#MA0303.1;7;0.0129908;6.18364;0.674081;6;TGACAC;TGAAGTATGACTCATCCCTTG;-!ESR2#MA0258.1;10;0.0131187;6.24448;0.674081;6;TGACAC;CAGGTCACCGTGACCTTG;-!CREB1#MA0018.2;0;0.0135425;6.44623;0.674081;6;TGACAC;TGACGTCA;+!hth#MA0227.1;0;0.0170111;8.09727;0.804393;6;TGACAC;TGACAG;+
}}
}}

Latest revision as of 12:30, 7 September 2012

Full Name: motif_TGACNC

Motif matrix
POACGT
010002880
020028800
032880000
040288000
05720720720720
060288000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ARG80#MA0271.100.0004273990.2034420.2309996TGACACAGACGC+
AP1#MA0099.200.0006605390.3144160.2309996TGACACTGACTCA+
ARG81#MA0272.110.0009167290.4363630.2309996TGACACGTGACTCT+
NFE2L2#MA0150.110.0009770210.4650620.2309996TGACACATGACTCAGCA+
usp#MA0016.130.001772580.8437460.2805286TGACACCCGTGACCCC-
CUP9#MA0288.100.001809580.8613590.2805286TGACACTGACACATT+
Six4#MA0204.100.002076380.9883590.2805286TGACACTGATAC+
Mafb#MA0117.120.002674281.272960.3161436TGACACGCTGACGG+
Fos#MA0099.100.00345071.642530.3626036TGACACTGACTCAC-
vis#MA0252.100.004021481.914230.3803236TGACACTGACAG+
BAS1#MA0278.160.004586612.183230.3943356TGACACTTGACTTGACTCTGGCTGTGC-
RXRA::VDR#MA0074.190.006168372.936150.4861346TGACACTGAACCCGATGACCC-
Pax2#MA0067.130.008412914.004550.5683095TGACACGCGTGACT-
TOS8#MA0408.120.01045484.976460.6591586TGACACTTTGACAG-
PPARG::RXRA#MA0065.1100.01218395.799530.6740816TGACACAGATGACCTTTGACCCCTGA-
GCN4#MA0303.170.01299086.183640.6740816TGACACTGAAGTATGACTCATCCCTTG-
ESR2#MA0258.1100.01311876.244480.6740816TGACACCAGGTCACCGTGACCTTG-
CREB1#MA0018.200.01354256.446230.6740816TGACACTGACGTCA+
hth#MA0227.100.01701118.097270.8043936TGACACTGACAG+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_TGACNC&oldid=2133673"