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MacroAPE 1083:CNhs10839 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;162.2943811910546;152.40637520950114;50.55007967878929;137.8124623566858!2;20.16276220240228;124.42922767357823;110.99173540929601;247.47957...")
 
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I6;0.00424066!10455-106G5;0.0557677!10534-107G3;0.676298!10429-106D6;0.0314167!10464-106H5;0.132459!10827-111C8;0.284001!10789-110H6;0.794458!10828-111C9;0.477226!10788-110H5;0.740495!10792-110H9;0.190726!10765-110E9;0.765275!10829-111D1;0.710452!10830-111D2;0.390968!10831-111D3;0.200299!10832-111D4;0.348636!10833-111D5;0.375049!10764-110E8;0.328796!10770-110F5;0.230719!10399-106A3;0.553304!10400-106A4;0.211497!10405-106A9;0.312245!10834-111D6;0.199534!10835-111D7;0.417389!10836-111D8;0.0113287!10837-111D9;0.0313532!10699-109G6;0.264996!10802-111A1;0.0752459!10796-110I4;0.0998362!10010-101C1;0.0302513!10810-111A9;0.0325605!10421-106C7;0.000507407!10708-109H6;0.802136!12235-129G3;2.86438e-05!12236-129G4;0.466284!12237-129G5;0.375375!10167-103B5;0.221715!10151-102I7;0.000169052!10428-106D5;0.000203964!10795-110I3;0.000734269!10805-111A4;0.0263653!10052-101G7;0.0367313!10189-103D9;0.0335582!10589-108D4;6.5824e-05!10425-106D2;0.117226!10427-106D4;0.136179!10702-109G9;0.696305!10432-106D9;0.569188!10496-107C1;0.00286246!10718-109I7;0.759004!10011-101C2;0.866555!10053-101G8;0.018714!10686-109F2;0.187905!10084-102B3;0.31489!10012-101C3;5.96441e-05!10085-102B4;4.9126e-05!10482-107A5;0.0247828!10419-106C5;0.0137333!10080-102A8;0.0532738!10760-110E4;0.357356!10709-109H7;0.0677447!10710-109H8;0.0209858!10703-109H1;0.117728!10719-109I8;0.546366!10642-109A3;0.159497!10177-103C6;0.298616!10164-103B2;5.44876e-05!10173-103C2;0.000117433!10166-103B4;0.0174053!10083-102B2;0.0132205!10188-103D8;0.00303568!10552-107I3;0.000195821!10553-107I4;0.0709994!10013-101C4;0.0233973!10536-107G5;0.000665215!10618-108G6;0.000881171!10423-106C9;0.0770849!10785-110H2;0.112018!12238-129G6;0.167914!12239-129G7;0.086949!12240-129G8;0.26734!10416-106C2;0.0556709!10801-110I9;0.644905!10766-110F1;0.132211!10824-111C5;0.149258!10825-111C6;0.00479737!10826-111C7;0.00420058!10454-106G4;0.0012529!10409-106B4;0.00756449!10638-108I8;0.229024!10636-108I6;0.00984499!10513-107D9;0.00138126!10420-106C6;0.0513277!10082-102B1;0.0120554!10014-101C5;0.000597253!10070-101I7;0.00103239!10452-106G2;0.000259456!10453-106G3;0.165554!10449-106F8;0.597636!10042-101F6;0.665354!10069-101I6;2.88955e-05!10193-103E4;0.0147045!10631-108I1;4.86711e-06!10438-106E6;0.165307!10488-107B2;0.114469!10196-103E7;4.44174e-06!10071-101I8;0.00472951!10071-101I8;1.2049e-05!10041-101F5;0.0522494!10451-106G1;0.000800181!10450-106F9;0.000166903!10604-108F1;0.00141419!10605-108F2;0.00947225!10606-108F3;0.000110687!10603-108E9;0.00263648!10497-107C2;0.0012518!10448-106F7;0.00451476!10643-109A4;0.00298485!10426-106D3;0.00690824!10431-106D8;0.0393616!10197-103E8;0.022234!10443-106F2;0.0014668!10815-111B5;7.74975e-05!10816-111B6;0.0531372!10817-111B7;0.0232714!10015-101C6;0.0519119!10410-106B5;0.000637785!10054-101G9;0.00955778!10758-110E2;2.72702e-05!10711-109H9;0.000605295!10040-101F4;0.000323754!10470-106I2;0.000211855!10415-106C1;0.0977845!10198-103E9;0.0300454!10614-108G2;0.00187794!10612-108F9;0.0492488!10549-107H9;0.0323628!10615-108G3;5.75393e-06!10487-107B1;0.0111825!10433-106E1;0.00870815!10688-109F4;0.00197506!10444-106F3;0.228537!10444-106F3;0.237712!10485-107A8;0.31648!10413-106B8;0.0956043!10175-103C4;0.00626137!10161-103A8;1.30064e-05!12131-128D7;9.54266e-05!10624-108H3;0.259036!10712-109I1;0.484834!10205-103F7;0.778848!10206-103F8;0.0180123!10207-103F9;0.0147866!10050-101G5;0.551232!10051-101G6;0.00968729!10016-101C7;0.0170968!10046-101G1;0.0811171!10778-110G4;0.027604!10633-108I3;0.641383!10818-111B8;0.00268924!10819-111B9;0.0161139!10820-111C1;0.0168932!10484-107A7;0.0151504!10808-111A7;0.00185217!10169-103B7;0.438586!10153-102I9;0.00015938!13425-144D5;8.86193e-05!13433-144E4;0.0327352!13437-144E8;0.0248521!11904-125F5;0.0324894!11905-125F6;0.772148!10039-101F3;0.283721!10791-110H8;0.000206875!10017-101C8;0.0295496!10045-101F9;0.0576792!10509-107D5;0.049446!10839-111E2;0.000587131!10692-109F8;0.520499!10079-102A7;0.000139264!10078-102A6;0.00673965!10721-110A1;0.05151!10569-108B2;0.00238447!10570-108B3;0.419615!10571-108B4;0.329404!10647-109A8;0.654615!10752-110D5;0.0122357!10782-110G8;0.0320481!10726-110A6;0.318123!10018-101C9;0.0292752!10086-102B5;0.450903!10182-103D2;0.771044!10165-103B3;1.77638e-05!10499-107C4;3.5067e-05!10408-106B3;0.0557303!10019-101D1;0.398757!10068-101I5;0.0263265!10075-102A3;0.0860878!10077-102A5;0.0142389!10727-110A7;0.0590899!10775-110G1;0.133538!10412-106B7;0.358274!12231-129F8;0.106847!12232-129F9;0.798145!12233-129G1;0.785272!12234-129G2;0.933301!10414-106B9;0.150631!10170-103B8;0.0262998!10183-103D3;0.000320724!10150-102I6;9.72064e-05!10174-103C3;8.75166e-05!10155-103A2;3.6039e-08!10038-101F2;2.63346e-06!10838-111E1;7.51666e-06!10759-110E3;0.0495069!10514-107E1;0.00406078!10465-106H6;1.89376e-05!10691-109F7;0.0171739!10843-111E6;0.0415612!10844-111E7;0.0492058!11747-123G1;0.190427!11748-123G2;0.676009!11749-123G3;0.631691!11750-123G4;0.808244!11751-123G5;0.693354!11840-124H4;0.239399!11752-123G6;0.581617!11753-123G7;0.207388!11754-123G8;0.871273!11755-123G9;0.770955!11756-123H1;0.0226235!11833-124G6;0.0696622!11760-123H5;0.0110746!11836-124G9;0.0359917!11758-123H3;0.844439!11835-124G8;0.537414!11762-123H7;0.841966!11838-124H2;0.945153!11757-123H2;0.905728!11759-123H4;0.337733!11761-123H6;0.381108!11842-124H6;0.214136!11837-124H1;0.345484!10568-108B1;0.763787!13230-141I8;0.524387!13231-141I9;0.129942!10696-109G3;0.218624!10493-107B7;0.572465!10494-107B8;0.00767388!10850-111F4;0.0318352!10851-111F5;0.0014534!10852-111F6;0.19603!10853-111F7;0.00515189!10854-111F8;0.00262751!10855-111F9;0.00224104!10856-111G1;0.635098!10847-111F1;0.0652951!10846-111E9;0.000629878!10848-111F2;0.00447291!10845-111E8;0.00539501!10857-111G2;0.000214332!10858-111G3;0.140713!10156-103A3;0.00111679!11901-125F2;9.60434e-05!11902-125F3;0.721547!11903-125F4;0.493169!10689-109F5;0.656805!10648-109A9;0.0204732!10784-110H1;0.186279!10744-110C6;0.000338135!10772-110F7;0.178942!10474-106I6;0.296664!10600-108E6;0.206339!10684-109E9;0.0339744!12226-129F3;0.00501874!12227-129F4;0.0661112!10508-107D4;0.109039!10539-107G8;0.961322!10607-108F4;0.442898!10555-107I6;0.00785712!10774-110F9;0.788145!10637-108I7;0.0302859!10663-109C6;0.180608!10728-110A8;0.0822554!10729-110A9;0.0899431!10430-106D7;0.629617!10730-110B1;0.0371583!10813-111B3;0.26606!10812-111B2;0.708578!10037-101F1;0.120086!10172-103C1;0.000165385!10163-103B1;0.000212709!10076-102A4;0.000227822!10073-102A1;0.000523687!10036-101E9;0.123729!10195-103E6;0.00014561!10277-104E7;8.48754e-05!10434-106E2;0.0081191!10550-107I1;0.0484668!10545-107H5;0.00144708!10544-107H4;0.0368556!10704-109H2;0.0211808!10510-107D6;0.845763!10558-107I9;0.000583012!10020-101D2;0.0407947!10732-110B3;0.00284202!10049-101G4;0.117852!10698-109G5;0.1947!10437-106E5;0.0586175!10417-106C3;0.0287343!10035-101E8;0.000849426!10171-103B9;0.000136473!10157-103A4;0.000174403!10034-101E7;0.00017207!10072-101I9;0.000227439!10199-103F1;0.0893363!10200-103F2;0.00504348!10697-109G4;0.00193601!10723-110A3;0.206565!10179-103C8;0.133817!10160-103A7;0.00212!10180-103C9;0.000521495!10162-103A9;0.0165992!10021-101D3;0.0258227!10840-111E3;0.0332621!10706-109H4;0.668161!10033-101E6;0.000673758!10032-101E5;2.27766e-06!10490-107B4;0.000119233!10439-106E7;0.00194454!10022-101D4;0.120933!10176-103C5;0.00294936!10469-106I1;0.000387431!10067-101I4;0.0247132!10411-106B6;0.00131305!10471-106I3;0.00075209!10030-101E3;0.000371694!10475-106I7;0.000318518!10787-110H4;0.050547!10477-106I9;0.000353218!10695-109G2;0.0333328!11771-123I7;0.258445!11772-123I8;0.00766069!11773-123I9;0.031623!10093-102C3;0.30993!10442-106F1;0.0034009!10442-106F1;1.45213e-07!10201-103F3;3.93766e-06!10639-108I9;0.00020099!11843-124H7;0.0271144!11841-124H5;8.47841e-05!10693-109F9;0.00619921!10436-106E4;0.0111422!10483-107A6;0.0571278!10282-104F3;0.046702!10023-101D5;0.208464!10066-101I3;0.076602!10065-101I2;0.00395787!10800-110I8;0.00167949!10610-108F7;0.00881067!10841-111E4;0.161369!10541-107H1;0.00611746!10842-111E5;0.0166684!10562-108A4;0.302997!10024-101D6;0.659774!10064-101I1;0.00128142!10609-108F6;0.000344262!10048-101G3;0.625667!10781-110G7;0.0236424!10181-103D1;0.762764!10159-103A6;1.47634e-05!10056-101H2;4.41717e-05!10737-110B8;0.000323136!10025-101D7;0.594679!10044-101F8;0.00902992!10424-106D1;0.014315!10463-106H4;0.984752!10616-108G4;0.0336151!10486-107A9;0.00131403!10062-101H8;0.0597172!10202-103F4;0.0124262!10158-103A5;7.91622e-05!10441-106E9;8.419e-06!10031-101E4;0.00727855!10063-101H9;9.19143e-05!10063-101H9;0.0926699!11763-123H8;1.11954e-05!11765-123I1;0.289774!11768-123I4;0.0811652!10807-111A6;0.368735!10790-110H7;0.0120447!10798-110I6;0.0331185!10786-110H3;0.00268992!10591-108D6;0.00426693!10593-108D8;0.00535591!10590-108D5;0.00221953!10026-101D8;0.000567755!10096-102C6;0.0457959!10168-103B6;0.835829!10154-103A1;3.10365e-05!10209-103G2;6.4973e-05!10061-101H7;0.0021755!10027-101D9;0.00179621!10043-101F7;0.417557!10783-110G9;0.0780638!10028-101E1;0.00954296!10060-101H6;0.25297!10203-103F5;0.0359467!10059-101H5;0.0027811!10047-101G2;0.00355611!10029-101E2;5.00069e-05!10058-101H4;0.00461847!10418-106C4;0.00288301!10492-107B6;0.0137683!10694-109G1;0.000101481!10797-110I5;0.320141!10057-101H3;0.00585901!10100-102D1;0.00107453!10055-101H1;0.0122361!10204-103F6;0.00490975!10191-103E2;0.282815!10563-108A5;0.00130861
|name=CNhs10839_bl_f1
|name=CNhs10839_bl_f1
|tomtom_result=SOK2#MA0385.1;-1;0.00133241;0.634228;1;10;ATCTCTGCAGT;TGCCTGCAGGT;-!PHD1#MA0355.1;-2;0.0059521;2.8332;1;9;ATCTCTGCAGT;ACCTGCAGCA;+!YJL103C#MA0427.1;0;0.006259;2.97929;1;11;ATCTCTGCAGT;AGCTCCGGAGA;+!USV1#MA0413.1;5;0.00817002;3.88893;1;11;ATCTCTGCAGT;AAATTCCCCCTGAATTTGTG;+!CUP2#MA0287.1;1;0.0109889;5.23072;1;10;ATCTCTGCAGT;CATTTCTGCTG;-!Pax5#MA0014.1;2;0.0118992;5.66402;1;11;ATCTCTGCAGT;GGAGCACTGAAGCGTAACCG;+!ARO80#MA0273.1;5;0.0128613;6.12197;1;11;ATCTCTGCAGT;GATAATTCTCGGCAAGTATGT;+!Myf#MA0055.1;-4;0.0183297;8.72496;1;7;ATCTCTGCAGT;CAGCAGCTGCTG;-!REI1#MA0364.1;-1;0.0187494;8.92473;1;7;ATCTCTGCAGT;CCCCTGA;+
}}
}}

Latest revision as of 12:26, 7 September 2012

Full Name: CNhs10839_bl_f1

Motif matrix
POACGT
1162.2943811910546152.4063752095011450.55007967878929137.8124623566858
220.16276220240228124.42922767357823110.99173540929601247.4795731507542
38.795334801087007308.131379328628111.235626843789047174.9009574625264
42.709482355179265226.992985009125081.2999779298872758272.0608531418389
50.0501.83105914360920.01.2322392924210959
634.268622757215780.00.0468.79467567881443
70.03.1125088053190035499.54770137112050.4030882595907437
8110.4444232445593282.447401241172596.6609436107192413.510530339579507
9257.7565622936045328.1786665417327781.2425286020440385215.8855409986492
1026.83791847912706153.19774554890896225.945742941386797.08189146660807
1192.37266081805771114.7180935122379411.311570259731827284.6609738460033

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SOK2#MA0385.1-10.001332410.634228110ATCTCTGCAGTTGCCTGCAGGT-
PHD1#MA0355.1-20.00595212.833219ATCTCTGCAGTACCTGCAGCA+
YJL103C#MA0427.100.0062592.97929111ATCTCTGCAGTAGCTCCGGAGA+
USV1#MA0413.150.008170023.88893111ATCTCTGCAGTAAATTCCCCCTGAATTTGTG+
CUP2#MA0287.110.01098895.23072110ATCTCTGCAGTCATTTCTGCTG-
Pax5#MA0014.120.01189925.66402111ATCTCTGCAGTGGAGCACTGAAGCGTAACCG+
ARO80#MA0273.150.01286136.12197111ATCTCTGCAGTGATAATTCTCGGCAAGTATGT+
Myf#MA0055.1-40.01832978.7249617ATCTCTGCAGTCAGCAGCTGCTG-
REI1#MA0364.1-10.01874948.9247317ATCTCTGCAGTCCCCTGA+
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