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MacroAPE 1083:AP2A f2: Difference between revisions

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H5;0.694667!10827-111C8;0.381906!10789-110H6;0.542353!10828-111C9;0.684285!10788-110H5;0.385418!10792-110H9;0.744999!10765-110E9;0.482208!10829-111D1;0.539668!10830-111D2;0.915001!10831-111D3;0.879762!10832-111D4;0.920716!10833-111D5;0.830625!10764-110E8;0.880934!10770-110F5;0.464583!10399-106A3;0.836867!10400-106A4;0.915699!10405-106A9;0.905334!10834-111D6;0.821422!10835-111D7;0.898468!10836-111D8;0.789654!10837-111D9;0.892159!10699-109G6;0.980678!10802-111A1;0.727489!10796-110I4;0.99272!10010-101C1;0.0508196!10810-111A9;0.103115!10421-106C7;0.227727!10708-109H6;0.863037!12235-129G3;0.0389695!12236-129G4;0.617495!12237-129G5;0.788496!10167-103B5;0.708226!10151-102I7;0.541196!10428-106D5;0.785736!10795-110I3;0.134488!10805-111A4;0.981327!10052-101G7;0.0354532!10189-103D9;0.325762!10589-108D4;0.178359!10425-106D2;0.322562!10427-106D4;0.265347!10702-109G9;0.853241!10432-106D9;0.340845!10496-107C1;0.000250726!10718-109I7;0.115107!10011-101C2;0.687047!10053-101G8;0.238023!10686-109F2;0.0543127!10084-102B3;0.504257!10012-101C3;0.722175!10085-102B4;0.829918!10482-107A5;0.349433!10419-106C5;0.00917255!10080-102A8;0.0261459!10760-110E4;0.481563!10709-109H7;0.0120607!10710-109H8;0.0136554!10703-109H1;0.0122128!10719-109I8;0.156547!10642-109A3;0.235451!10177-103C6;0.140448!10164-103B2;0.64472!10173-103C2;0.740052!10166-103B4;0.401095!10083-102B2;0.454129!10188-103D8;0.413206!10552-107I3;0.787542!10553-107I4;0.23272!10013-101C4;0.00368665!10536-107G5;0.168702!10618-108G6;0.0245324!10423-106C9;0.240766!10785-110H2;0.209908!12238-129G6;0.358217!12239-129G7;0.599162!12240-129G8;0.233776!10416-106C2;0.293297!10801-110I9;0.88914!10766-110F1;0.856068!10824-111C5;0.926079!10825-111C6;0.525306!10826-111C7;0.534491!10454-106G4;0.597521!10409-106B4;0.517296!10638-108I8;0.836273!10636-108I6;0.230752!10513-107D9;0.0286156!10420-106C6;0.128988!10082-102B1;0.377314!10014-101C5;0.826464!10070-101I7;0.334249!10452-106G2;0.414277!10453-106G3;0.57452!10449-106F8;0.63359!10042-101F6;0.573815!10069-101I6;0.778999!10193-103E4;0.0611103!10631-108I1;0.81855!10438-106E6;0.644107!10488-107B2;0.0190656!10196-103E7;0.117576!10071-101I8;0.592246!10071-101I8;0.280869!10041-101F5;0.386776!10451-106G1;0.228858!10450-106F9;0.179929!10604-108F1;0.081882!10605-108F2;0.0890089!10606-108F3;0.0656984!10603-108E9;0.159013!10497-107C2;0.127526!10448-106F7;0.776983!10643-109A4;0.0553553!10426-106D3;0.0397578!10431-106D8;0.0270482!10197-103E8;0.00100031!10443-106F2;0.14865!10815-111B5;0.625869!10816-111B6;0.276857!10817-111B7;0.239243!10015-101C6;0.245712!10410-106B5;0.370263!10054-101G9;0.174691!10758-110E2;0.318495!10711-109H9;0.457516!10040-101F4;0.258419!10470-106I2;0.677663!10415-106C1;0.0962898!10198-103E9;0.0590898!10614-108G2;0.316901!10612-108F9;0.165514!10549-107H9;0.0207866!10615-108G3;0.348755!10487-107B1;0.209584!10433-106E1;0.202555!10688-109F4;0.020004!10444-106F3;0.0710678!10444-106F3;0.5806!10485-107A8;0.638124!10413-106B8;0.00458813!10175-103C4;0.374095!10161-103A8;0.596474!12131-128D7;0.881411!10624-108H3;0.394321!10712-109I1;0.0171367!10205-103F7;0.887872!10206-103F8;0.093265!10207-103F9;0.0951549!10050-101G5;0.347671!10051-101G6;0.259927!10016-101C7;0.0689508!10046-101G1;0.13807!10778-110G4;0.128087!10633-108I3;0.556596!10818-111B8;0.0980503!10819-111B9;0.867637!10820-111C1;0.805723!10484-107A7;0.835546!10808-111A7;0.612888!10169-103B7;0.963382!10153-102I9;0.628305!13425-144D5;0.855145!13433-144E4;0.00349603!13437-144E8;0.00422073!11904-125F5;0.0354138!11905-125F6;0.981419!10039-101F3;0.307165!10791-110H8;0.703609!10017-101C8;0.00536744!10045-101F9;0.390259!10509-107D5;0.451801!10839-111E2;0.384776!10692-109F8;0.278506!10079-102A7;0.000420483!10078-102A6;0.0553194!10721-110A1;0.129173!10569-108B2;0.446339!10570-108B3;0.10678!10571-108B4;0.180281!10647-109A8;0.137876!10752-110D5;0.211829!10782-110G8;0.402733!10726-110A6;0.0236389!10018-101C9;0.0043811!10086-102B5;0.0805698!10182-103D2;0.145915!10165-103B3;0.454292!10499-107C4;0.596805!10408-106B3;0.298573!10019-101D1;0.249247!10068-101I5;0.365229!10075-102A3;0.154863!10077-102A5;0.235246!10727-110A7;0.0958296!10775-110G1;0.847317!10412-106B7;0.756128!12231-129F8;0.00755713!12232-129F9;0.49275!12233-129G1;0.25821!12234-129G2;0.386837!10414-106B9;0.428582!10170-103B8;0.0499692!10183-103D3;0.602682!10150-102I6;0.66142!10174-103C3;0.732918!10155-103A2;0.7779!10038-101F2;0.912314!10838-111E1;0.816871!10759-110E3;0.275479!10514-107E1;0.00903125!10465-106H6;0.447489!10691-109F7;0.122588!10843-111E6;0.357525!10844-111E7;0.158011!11747-123G1;0.0970548!11748-123G2;0.0206172!11749-123G3;0.147002!11750-123G4;0.0227135!11751-123G5;0.34138!11840-124H4;0.183471!11752-123G6;0.074488!11753-123G7;0.432001!11754-123G8;0.355129!11755-123G9;0.0854531!11756-123H1;0.298148!11833-124G6;0.410043!11760-123H5;0.280881!11836-124G9;0.290422!11758-123H3;0.0380418!11835-124G8;0.383966!11762-123H7;0.336805!11838-124H2;0.587542!11757-123H2;0.480717!11759-123H4;0.287055!11761-123H6;0.26783!11842-124H6;0.604312!11837-124H1;0.781878!10568-108B1;0.260289!13230-141I8;0.401142!13231-141I9;0.0930369!10696-109G3;0.128753!10493-107B7;0.377383!10494-107B8;0.33532!10850-111F4;0.77191!10851-111F5;0.279637!10852-111F6;0.489377!10853-111F7;0.573025!10854-111F8;0.373409!10855-111F9;0.177442!10856-111G1;0.69498!10847-111F1;0.0665793!10846-111E9;8.88592e-05!10848-111F2;0.0201277!10845-111E8;0.507637!10857-111G2;0.242805!10858-111G3;0.0713598!10156-103A3;0.144428!11901-125F2;0.766269!11902-125F3;0.881512!11903-125F4;0.986009!10689-109F5;0.747924!10648-109A9;0.268415!10784-110H1;0.200467!10744-110C6;0.00424911!10772-110F7;0.984398!10474-106I6;0.656329!10600-108E6;0.368652!10684-109E9;0.568753!12226-129F3;0.33021!12227-129F4;0.0245247!10508-107D4;0.328339!10539-107G8;0.55767!10607-108F4;0.704648!10555-107I6;0.284367!10774-110F9;0.403336!10637-108I7;0.177831!10663-109C6;0.447067!10728-110A8;0.204911!10729-110A9;0.438683!10430-106D7;0.466243!10730-110B1;0.429664!10813-111B3;0.150581!10812-111B2;0.56887!10037-101F1;0.150499!10172-103C1;0.703879!10163-103B1;0.563173!10076-102A4;0.688048!10073-102A1;0.624825!10036-101E9;0.344956!10195-103E6;0.706734!10277-104E7;0.760178!10434-106E2;0.967577!10550-107I1;0.026455!10545-107H5;0.00437515!10544-107H4;0.00772719!10704-109H2;0.00124627!10510-107D6;0.349063!10558-107I9;0.0806634!10020-101D2;0.464205!10732-110B3;0.287531!10049-101G4;0.0719357!10698-109G5;0.396819!10437-106E5;0.174952!10417-106C3;0.0173078!10035-101E8;0.0561765!10171-103B9;0.619061!10157-103A4;0.565717!10034-101E7;0.777762!10072-101I9;0.648528!10199-103F1;0.380836!10200-103F2;0.663966!10697-109G4;0.120584!10723-110A3;0.424637!10179-103C8;0.00110438!10160-103A7;0.80633!10180-103C9;0.723698!10162-103A9;0.66236!10021-101D3;0.584688!10840-111E3;0.136155!10706-109H4;0.771693!10033-101E6;0.578459!10032-101E5;0.617882!10490-107B4;0.693246!10439-106E7;0.0507851!10022-101D4;0.0108151!10176-103C5;0.273252!10469-106I1;0.627996!10067-101I4;0.1993!10411-106B6;0.818082!10471-106I3;0.168429!10030-101E3;0.43906!10475-106I7;0.266108!10787-110H4;0.441533!10477-106I9;0.637516!10695-109G2;0.78247!11771-123I7;0.323823!11772-123I8;0.0206992!11773-123I9;0.0225206!10093-102C3;0.0373259!10442-106F1;0.330823!10442-106F1;0.613967!10201-103F3;0.465236!10639-108I9;0.160058!11843-124H7;0.0323988!11841-124H5;0.0482308!10693-109F9;0.120573!10436-106E4;0.0353261!10483-107A6;0.022195!10282-104F3;0.203507!10023-101D5;0.0537053!10066-101I3;0.0744535!10065-101I2;0.101018!10800-110I8;0.11586!10610-108F7;0.0229283!10841-111E4;0.225768!10541-107H1;0.326148!10842-111E5;0.160948!10562-108A4;0.231143!10024-101D6;0.0248103!10064-101I1;0.418302!10609-108F6;0.472931!10048-101G3;0.00827018!10781-110G7;0.377656!10181-103D1;0.00283554!10159-103A6;0.917478!10056-101H2;0.801247!10737-110B8;0.710813!10025-101D7;0.723555!10044-101F8;0.308262!10424-106D1;0.203718!10463-106H4;0.705335!10616-108G4;0.0176815!10486-107A9;0.0503277!10062-101H8;0.0738437!10202-103F4;0.652298!10158-103A5;0.377063!10441-106E9;0.935934!10031-101E4;0.150309!10063-101H9;0.779195!10063-101H9;0.396882!11763-123H8;0.20363!11765-123I1;0.219845!11768-123I4;0.393065!10807-111A6;0.148063!10790-110H7;0.0222086!10798-110I6;0.254296!10786-110H3;0.0731384!10591-108D6;2.49354e-05!10593-108D8;0.182096!10590-108D5;0.0209675!10026-101D8;0.0432837!10096-102C6;0.474876!10168-103B6;0.295753!10154-103A1;0.615954!10209-103G2;0.856732!10061-101H7;0.0991239!10027-101D9;0.191374!10043-101F7;0.715254!10783-110G9;0.279065!10028-101E1;0.0715317!10060-101H6;0.720469!10203-103F5;0.368404!10059-101H5;0.150617!10047-101G2;0.182256!10029-101E2;0.184387!10058-101H4;0.317767!10418-106C4;0.227067!10492-107B6;0.00268349!10694-109G1;0.0561315!10797-110I5;0.43214!10057-101H3;0.0571344!10100-102D1;0.108567!10055-101H1;0.20335!10204-103F6;0.443041!10191-103E2;0.647462!10563-108A5;0.0522145
|name=AP2A_f2
|name=AP2A_f2
|tomtom_result=TFAP2A#MA0003.1;0;2.02098e-05;0.00961986;0.0118601;9;GCCTGAGGC;GCCCGGGGG;+!EBF1#MA0154.1;1;0.000590243;0.280956;0.187256;9;GCCTGAGGC;TCCCTTGGGT;-!PLAG1#MA0163.1;2;0.00344559;1.6401;0.680458;9;GCCTGAGGC;CCCCCTTGGGCCCC;-!Zfx#MA0146.1;2;0.00461032;2.19451;0.680458;9;GCCTGAGGC;GGGGCCGAGGCCTG;+!INSM1#MA0155.1;1;0.00536248;2.55254;0.680458;9;GCCTGAGGC;TGTCAGGGGGCG;+!MET28#MA0332.1;-2;0.00569003;2.70845;0.680458;6;GCCTGAGGC;CTGTGG;+!DAL81#MA0290.1;6;0.00571958;2.72252;0.680458;9;GCCTGAGGC;AATCCCGCCCGCGGCTTTT;-!MIG1#MA0337.1;-2;0.0102785;4.89254;0.869498;7;GCCTGAGGC;GCGGGGG;-!YPR022C#MA0436.1;-1;0.0108228;5.15167;0.869498;7;GCCTGAGGC;CGTGGGG;-!MIG3#MA0339.1;-1;0.012635;6.01426;0.869498;7;GCCTGAGGC;TGCGGGG;-!NHP10#MA0344.1;0;0.0136738;6.50873;0.869498;8;GCCTGAGGC;GCCGGGGA;+!RUNX1#MA0002.2;0;0.0145602;6.93064;0.869498;9;GCCTGAGGC;GTCTGTGGTTT;+!REI1#MA0364.1;1;0.0147519;7.02189;0.869498;6;GCCTGAGGC;CCCCTGA;+!ESR1#MA0112.2;11;0.0149675;7.12451;0.869498;9;GCCTGAGGC;AGGTCAGGGTGACCTGGGCC;-!MIG2#MA0338.1;-1;0.0155307;7.39261;0.869498;7;GCCTGAGGC;TGCGGGG;-!Zfp423#MA0116.1;4;0.0176688;8.41034;0.885075;9;GCCTGAGGC;GCACCCCTGGGTGCC;-
}}
}}

Latest revision as of 12:25, 7 September 2012

Full Name: AP2A_f2

Motif matrix
POACGT
130.068373481659258764.29987402681091082.876421037843652.495499430516126
212.0748454587093891790.450420818640497.0481911361402630.16671056334533
325.300408225330251749.19019155092281.2590892228273773.99047897775678
465.31834409971299418.8412744103452169.39667295311051276.183876513663
50.00.01742.2949002951593187.44526768167702
6821.5197555834221296.74927120687806741.939383821343469.53175736518443
7144.8218486018777229.8941664184910321745.53049779960029.493655156866858
838.3016346742118928.5316397650838841859.28791315168273.618980385856917
9126.343751652116421035.5405579040066698.289369102502269.56648931820453

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
TFAP2A#MA0003.102.02098e-050.009619860.01186019GCCTGAGGCGCCCGGGGG+
EBF1#MA0154.110.0005902430.2809560.1872569GCCTGAGGCTCCCTTGGGT-
PLAG1#MA0163.120.003445591.64010.6804589GCCTGAGGCCCCCCTTGGGCCCC-
Zfx#MA0146.120.004610322.194510.6804589GCCTGAGGCGGGGCCGAGGCCTG+
INSM1#MA0155.110.005362482.552540.6804589GCCTGAGGCTGTCAGGGGGCG+
MET28#MA0332.1-20.005690032.708450.6804586GCCTGAGGCCTGTGG+
DAL81#MA0290.160.005719582.722520.6804589GCCTGAGGCAATCCCGCCCGCGGCTTTT-
MIG1#MA0337.1-20.01027854.892540.8694987GCCTGAGGCGCGGGGG-
YPR022C#MA0436.1-10.01082285.151670.8694987GCCTGAGGCCGTGGGG-
MIG3#MA0339.1-10.0126356.014260.8694987GCCTGAGGCTGCGGGG-
NHP10#MA0344.100.01367386.508730.8694988GCCTGAGGCGCCGGGGA+
RUNX1#MA0002.200.01456026.930640.8694989GCCTGAGGCGTCTGTGGTTT+
REI1#MA0364.110.01475197.021890.8694986GCCTGAGGCCCCCTGA+
ESR1#MA0112.2110.01496757.124510.8694989GCCTGAGGCAGGTCAGGGTGACCTGGGCC-
MIG2#MA0338.1-10.01553077.392610.8694987GCCTGAGGCTGCGGGG-
Zfp423#MA0116.140.01766888.410340.8850759GCCTGAGGCGCACCCCTGGGTGCC-
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