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MacroAPE 1083:GGATGACGAA,motif197: Difference between revisions

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429-106D6;0.0716431!10464-106H5;0.302613!10827-111C8;0.45803!10789-110H6;0.68319!10828-111C9;0.855779!10788-110H5;0.153786!10792-110H9;0.768535!10765-110E9;0.774039!10829-111D1;0.846621!10830-111D2;0.976705!10831-111D3;0.230105!10832-111D4;0.606155!10833-111D5;0.206415!10764-110E8;0.238452!10770-110F5;0.105327!10399-106A3;0.952516!10400-106A4;0.479244!10405-106A9;0.40666!10834-111D6;0.475954!10835-111D7;0.543866!10836-111D8;0.955533!10837-111D9;0.388453!10699-109G6;0.543263!10802-111A1;0.911136!10796-110I4;0.159048!10010-101C1;0.197156!10810-111A9;0.286155!10421-106C7;0.87515!10708-109H6;0.544452!12235-129G3;0.56341!12236-129G4;0.790441!12237-129G5;0.590945!10167-103B5;0.753984!10151-102I7;0.600944!10428-106D5;0.953361!10795-110I3;0.0302309!10805-111A4;0.249878!10052-101G7;0.811261!10189-103D9;0.478126!10589-108D4;0.752055!10425-106D2;0.746077!10427-106D4;0.96648!10702-109G9;0.558016!10432-106D9;0.568798!10496-107C1;0.829829!10718-109I7;0.832421!10011-101C2;0.712276!10053-101G8;0.740199!10686-109F2;0.340699!10084-102B3;0.835243!10012-101C3;0.861711!10085-102B4;0.975212!10482-107A5;0.6082!10419-106C5;0.913616!10080-102A8;0.55725!10760-110E4;0.747226!10709-109H7;0.612852!10710-109H8;0.112799!10703-109H1;0.375832!10719-109I8;0.368121!10642-109A3;0.475452!10177-103C6;0.723585!10164-103B2;0.650545!10173-103C2;0.862986!10166-103B4;0.608689!10083-102B2;0.739823!10188-103D8;0.967764!10552-107I3;0.707117!10553-107I4;0.287187!10013-101C4;0.36504!10536-107G5;0.76849!10618-108G6;0.499475!10423-106C9;0.675373!10785-110H2;0.541835!12238-129G6;0.21406!12239-129G7;0.705023!12240-129G8;0.741203!10416-106C2;0.48997!10801-110I9;0.263086!10766-110F1;0.768313!10824-111C5;0.640491!10825-111C6;0.670484!10826-111C7;0.863749!10454-106G4;0.786958!10409-106B4;0.722232!10638-108I8;0.298089!10636-108I6;0.113385!10513-107D9;0.97399!10420-106C6;0.074777!10082-102B1;0.454805!10014-101C5;0.0822612!10070-101I7;0.295044!10452-106G2;0.633915!10453-106G3;0.00279185!10449-106F8;0.0284599!10042-101F6;0.0695636!10069-101I6;0.461898!10193-103E4;0.987633!10631-108I1;0.832335!10438-106E6;0.576786!10488-107B2;0.58751!10196-103E7;0.838853!10071-101I8;0.651671!10071-101I8;0.677027!10041-101F5;0.452197!10451-106G1;0.888107!10450-106F9;0.783907!10604-108F1;0.899793!10605-108F2;0.309267!10606-108F3;0.304996!10603-108E9;0.681834!10497-107C2;0.385125!10448-106F7;0.444667!10643-109A4;0.219227!10426-106D3;0.29081!10431-106D8;0.221989!10197-103E8;0.281769!10443-106F2;0.814696!10815-111B5;0.45516!10816-111B6;0.0802081!10817-111B7;0.0879626!10015-101C6;0.0643454!10410-106B5;0.215584!10054-101G9;0.552899!10758-110E2;0.527107!10711-109H9;0.426225!10040-101F4;0.629676!10470-106I2;0.98673!10415-106C1;0.818625!10198-103E9;0.0772383!10614-108G2;0.446485!10612-108F9;0.2509!10549-107H9;0.222078!10615-108G3;0.646264!10487-107B1;0.769842!10433-106E1;0.262157!10688-109F4;0.18252!10444-106F3;0.165525!10444-106F3;0.862313!10485-107A8;0.988259!10413-106B8;0.00821777!10175-103C4;0.924447!10161-103A8;0.484165!12131-128D7;0.552424!10624-108H3;0.0451441!10712-109I1;0.826826!10205-103F7;0.83762!10206-103F8;0.000292785!10207-103F9;0.0994827!10050-101G5;0.000507632!10051-101G6;0.048554!10016-101C7;0.00741838!10046-101G1;0.000509346!10778-110G4;0.0145172!10633-108I3;0.618437!10818-111B8;0.40077!10819-111B9;0.389539!10820-111C1;0.417828!10484-107A7;0.451178!10808-111A7;0.164834!10169-103B7;0.692579!10153-102I9;0.818043!13425-144D5;0.777634!13433-144E4;0.230725!13437-144E8;0.419999!11904-125F5;0.461923!11905-125F6;0.132512!10039-101F3;0.18806!10791-110H8;0.84107!10017-101C8;0.232307!10045-101F9;0.992413!10509-107D5;0.70283!10839-111E2;0.0959971!10692-109F8;0.550144!10079-102A7;0.581525!10078-102A6;0.000312389!10721-110A1;0.00641757!10569-108B2;0.74092!10570-108B3;0.0795785!10571-108B4;0.898732!10647-109A8;0.021484!10752-110D5;0.797559!10782-110G8;0.106991!10726-110A6;0.500317!10018-101C9;0.125587!10086-102B5;0.510814!10182-103D2;0.904765!10165-103B3;0.386073!10499-107C4;0.414594!10408-106B3;0.532156!10019-101D1;0.995746!10068-101I5;0.695476!10075-102A3;0.386281!10077-102A5;0.807795!10727-110A7;0.813951!10775-110G1;0.373109!10412-106B7;0.540836!12231-129F8;0.986063!12232-129F9;0.812596!12233-129G1;0.801901!12234-129G2;0.529025!10414-106B9;0.668626!10170-103B8;0.731858!10183-103D3;0.768711!10150-102I6;0.807535!10174-103C3;0.941856!10155-103A2;0.547592!10038-101F2;0.8375!10838-111E1;0.901733!10759-110E3;0.240395!10514-107E1;0.4168!10465-106H6;0.112676!10691-109F7;0.453859!10843-111E6;0.226443!10844-111E7;0.0942821!11747-123G1;0.540095!11748-123G2;0.837937!11749-123G3;0.839476!11750-123G4;0.539177!11751-123G5;0.852315!11840-124H4;0.604672!11752-123G6;0.438825!11753-123G7;0.279356!11754-123G8;0.433379!11755-123G9;0.526987!11756-123H1;0.342325!11833-124G6;0.353504!11760-123H5;0.971852!11836-124G9;0.0839235!11758-123H3;0.869481!11835-124G8;0.118647!11762-123H7;0.463432!11838-124H2;0.00658355!11757-123H2;0.00175947!11759-123H4;0.322403!11761-123H6;0.60299!11842-124H6;0.163306!11837-124H1;0.826265!10568-108B1;0.14902!13230-141I8;0.292097!13231-141I9;0.254401!10696-109G3;0.361408!10493-107B7;0.303019!10494-107B8;0.799857!10850-111F4;0.227199!10851-111F5;0.128318!10852-111F6;0.0489664!10853-111F7;0.16507!10854-111F8;0.269471!10855-111F9;0.30785!10856-111G1;0.0992485!10847-111F1;0.0404938!10846-111E9;0.148655!10848-111F2;0.033403!10845-111E8;0.470789!10857-111G2;0.402325!10858-111G3;0.816089!10156-103A3;0.413134!11901-125F2;0.929762!11902-125F3;0.300198!11903-125F4;0.188721!10689-109F5;0.0745054!10648-109A9;0.0709543!10784-110H1;0.281319!10744-110C6;0.0915432!10772-110F7;0.172555!10474-106I6;0.510841!10600-108E6;0.497991!10684-109E9;0.847378!12226-129F3;0.00622935!12227-129F4;0.531285!10508-107D4;0.440662!10539-107G8;0.493774!10607-108F4;0.236529!10555-107I6;0.104184!10774-110F9;0.475016!10637-108I7;0.113052!10663-109C6;0.0880378!10728-110A8;0.478578!10729-110A9;0.0447953!10430-106D7;0.955068!10730-110B1;0.272072!10813-111B3;0.366777!10812-111B2;0.347175!10037-101F1;0.989741!10172-103C1;0.812424!10163-103B1;0.409255!10076-102A4;0.964583!10073-102A1;0.652537!10036-101E9;0.90888!10195-103E6;0.992241!10277-104E7;0.865095!10434-106E2;0.436558!10550-107I1;0.697473!10545-107H5;0.329813!10544-107H4;0.194814!10704-109H2;0.168009!10510-107D6;0.245452!10558-107I9;0.498916!10020-101D2;0.0133822!10732-110B3;0.536883!10049-101G4;0.0337047!10698-109G5;0.452293!10437-106E5;0.738292!10417-106C3;0.126888!10035-101E8;0.87201!10171-103B9;0.97248!10157-103A4;0.693089!10034-101E7;0.846843!10072-101I9;0.9005!10199-103F1;0.74205!10200-103F2;0.913366!10697-109G4;0.948149!10723-110A3;0.770733!10179-103C8;0.511866!10160-103A7;0.252505!10180-103C9;0.923016!10162-103A9;0.035676!10021-101D3;0.138118!10840-111E3;0.34924!10706-109H4;0.554389!10033-101E6;0.754183!10032-101E5;0.516775!10490-107B4;0.952042!10439-106E7;0.892718!10022-101D4;0.226949!10176-103C5;0.642296!10469-106I1;0.691727!10067-101I4;0.347486!10411-106B6;0.926413!10471-106I3;0.0647733!10030-101E3;0.641279!10475-106I7;0.335032!10787-110H4;0.510715!10477-106I9;0.285069!10695-109G2;0.143345!11771-123I7;0.866019!11772-123I8;0.633426!11773-123I9;0.322943!10093-102C3;0.893445!10442-106F1;0.810216!10442-106F1;0.260796!10201-103F3;0.415672!10639-108I9;0.833335!11843-124H7;0.290757!11841-124H5;0.966795!10693-109F9;0.818253!10436-106E4;0.269228!10483-107A6;0.865997!10282-104F3;0.145516!10023-101D5;0.802397!10066-101I3;0.264674!10065-101I2;0.945415!10800-110I8;0.85372!10610-108F7;0.82149!10841-111E4;0.32789!10541-107H1;0.233417!10842-111E5;0.830349!10562-108A4;0.506933!10024-101D6;0.799667!10064-101I1;0.296927!10609-108F6;0.126953!10048-101G3;0.0139946!10781-110G7;0.649725!10181-103D1;0.019833!10159-103A6;0.457534!10056-101H2;0.682236!10737-110B8;0.876747!10025-101D7;0.854252!10044-101F8;0.637453!10424-106D1;0.771795!10463-106H4;0.886461!10616-108G4;0.694639!10486-107A9;0.98612!10062-101H8;0.9044!10202-103F4;0.650092!10158-103A5;0.698874!10441-106E9;0.993258!10031-101E4;0.609665!10063-101H9;0.804243!10063-101H9;0.627444!11763-123H8;0.384204!11765-123I1;0.914358!11768-123I4;0.218452!10807-111A6;0.646749!10790-110H7;0.594519!10798-110I6;0.526692!10786-110H3;0.141348!10591-108D6;0.772407!10593-108D8;0.86792!10590-108D5;0.810656!10026-101D8;0.988933!10096-102C6;0.775903!10168-103B6;0.723692!10154-103A1;0.494271!10209-103G2;0.517129!10061-101H7;0.732751!10027-101D9;0.957282!10043-101F7;0.381533!10783-110G9;0.426133!10028-101E1;0.0504417!10060-101H6;0.278323!10203-103F5;0.575411!10059-101H5;0.612505!10047-101G2;0.824058!10029-101E2;0.410343!10058-101H4;0.813147!10418-106C4;0.539255!10492-107B6;0.0642699!10694-109G1;0.599736!10797-110I5;0.288152!10057-101H3;0.242949!10100-102D1;0.8999!10055-101H1;0.99967!10204-103F6;0.362515!10191-103E2;0.500755!10563-108A5;0.279061
|name=GGATGACGAA,motif197,CNhs13492,T:2283.0(39.34%),B:24687.2(30.96%),P:1e-41
|name=GGATGACGAA,motif197,CNhs13492,T:2283.0(39.34%),B:24687.2(30.96%),P:1e-41
|tomtom_result=NFE2L1::MafG#MA0089.1;-1;0.00108848;0.518119;0.522285;6;GGATGACGAA;CATGAC;+!CREB1#MA0018.1;2;0.00109724;0.522285;0.522285;10;GGATGACGAA;CCTGGTGACGTC;+!TGA1A#MA0129.1;-3;0.00461382;2.19618;1;7;GGATGACGAA;TGACGTA;-!CST6#MA0286.1;-2;0.0062303;2.96562;1;8;GGATGACGAA;ATGACGTAA;+!Deaf1#MA0185.1;-4;0.00629964;2.99863;1;6;GGATGACGAA;CACGAA;-!STAT1#MA0137.1;0;0.0079177;3.76883;1;10;GGATGACGAA;GGAAAACGAAACTG;+!bZIP910#MA0096.1;-2;0.00834993;3.97457;1;7;GGATGACGAA;CTGACGT;+!bcd#MA0212.1;0;0.00953879;4.54046;1;6;GGATGACGAA;GGATTA;-!oc#MA0234.1;0;0.00953879;4.54046;1;6;GGATGACGAA;GGATTA;-!Mafb#MA0117.1;-1;0.0105272;5.01093;1;8;GGATGACGAA;GCTGACGG;+!YAP7#MA0419.1;0;0.0116205;5.53135;1;10;GGATGACGAA;TGCTTACTAAT;-!Sox2#MA0143.1;3;0.0140085;6.66804;1;10;GGATGACGAA;TTTGCATAACAAAGG;-!Gsc#MA0190.1;0;0.0144432;6.87499;1;6;GGATGACGAA;GGATTA;-!CAD1#MA0279.1;-1;0.0174986;8.32933;1;9;GGATGACGAA;GCTTACTAAT;-
}}
}}

Latest revision as of 12:19, 7 September 2012

Full Name: GGATGACGAA,motif197,CNhs13492,T:2283.0(39.34%),B:24687.2(30.96%),P:1e-41

Motif matrix
POACGT
12.2832.2832276.1512.283
22.2832.2832276.1512.283
32276.1512.2832.2832.283
42.2832.2832.2832276.151
52.2832.2832276.1512.283
62276.1512.2832.2832.283
72.2832276.1512.2832.283
82.2832.2832276.1512.283
91986.21292.2242.2832.283
102276.1512.2832.2832.283

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NFE2L1::MafG#MA0089.1-10.001088480.5181190.5222856GGATGACGAACATGAC+
CREB1#MA0018.120.001097240.5222850.52228510GGATGACGAACCTGGTGACGTC+
TGA1A#MA0129.1-30.004613822.1961817GGATGACGAATGACGTA-
CST6#MA0286.1-20.00623032.9656218GGATGACGAAATGACGTAA+
Deaf1#MA0185.1-40.006299642.9986316GGATGACGAACACGAA-
STAT1#MA0137.100.00791773.76883110GGATGACGAAGGAAAACGAAACTG+
bZIP910#MA0096.1-20.008349933.9745717GGATGACGAACTGACGT+
bcd#MA0212.100.009538794.5404616GGATGACGAAGGATTA-
oc#MA0234.100.009538794.5404616GGATGACGAAGGATTA-
Mafb#MA0117.1-10.01052725.0109318GGATGACGAAGCTGACGG+
YAP7#MA0419.100.01162055.53135110GGATGACGAATGCTTACTAAT-
Sox2#MA0143.130.01400856.66804110GGATGACGAATTTGCATAACAAAGG-
Gsc#MA0190.100.01444326.8749916GGATGACGAAGGATTA-
CAD1#MA0279.1-10.01749868.3293319GGATGACGAAGCTTACTAAT-
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