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MacroAPE 1083:CNhs11344 bl f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;47.21168851248282;20.9329842219453;103.25274419985928;100.63454992473847!2;53.81460722458949;8.334959561478414;182.2176996765955;27.66470039...")
 
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9A1;0.118628!12180-129A2;0.368571!12181-129A3;0.460224!12176-128I7;0.575397!12177-128I8;0.253401!12182-129A4;0.299469!12183-129A5;0.355008!12184-129A6;0.354245!10809-111A8;0.423402!10597-108E3;0.0472011!10717-109I6;0.490265!10455-106G5;0.000544422!10534-107G3;0.00234056!10429-106D6;0.00880543!10464-106H5;0.0312316!10827-111C8;0.0159799!10789-110H6;0.00682229!10828-111C9;0.000218401!10788-110H5;0.00853677!10792-110H9;9.0665e-05!10765-110E9;0.00535922!10829-111D1;0.0134273!10830-111D2;0.00613913!10831-111D3;0.0334163!10832-111D4;0.00259955!10833-111D5;0.00669825!10764-110E8;0.00795882!10770-110F5;0.00322562!10399-106A3;0.000282012!10400-106A4;0.00159341!10405-106A9;0.000954137!10834-111D6;0.000938065!10835-111D7;0.00132166!10836-111D8;0.00590455!10837-111D9;0.0147518!10699-109G6;0.00154241!10802-111A1;0.059971!10796-110I4;0.0218646!10010-101C1;0.00353725!10810-111A9;0.0219324!10421-106C7;0.0168805!10708-109H6;0.000868824!12235-129G3;0.00166605!12236-129G4;0.382951!12237-129G5;0.880037!10167-103B5;0.55013!10151-102I7;3.73396e-06!10428-106D5;2.53368e-06!10795-110I3;0.285704!10805-111A4;0.00068349!10052-101G7;0.0222228!10189-103D9;0.000204963!10589-108D4;0.00949403!10425-106D2;0.0634886!10427-106D4;0.979225!10702-109G9;0.000977818!10432-106D9;0.0566626!10496-107C1;0.00215473!10718-109I7;0.0139831!10011-101C2;0.00470978!10053-101G8;0.000984897!10686-109F2;0.279648!10084-102B3;0.40878!10012-101C3;1.0025e-05!10085-102B4;3.19438e-06!10482-107A5;2.35098e-05!10419-106C5;0.0326211!10080-102A8;0.0133019!10760-110E4;0.100907!10709-109H7;0.00203601!10710-109H8;0.00177403!10703-109H1;0.00580073!10719-109I8;0.726386!10642-109A3;0.644036!10177-103C6;0.971252!10164-103B2;3.54194e-05!10173-103C2;1.19899e-05!10166-103B4;0.000129652!10083-102B2;9.91172e-05!10188-103D8;8.26299e-05!10552-107I3;5.57054e-06!10553-107I4;0.000274932!10013-101C4;0.0243754!10536-107G5;0.000661351!10618-108G6;0.211524!10423-106C9;0.00729053!10785-110H2;0.00472174!12238-129G6;0.000138918!12239-129G7;0.512545!12240-129G8;0.895369!10416-106C2;0.330935!10801-110I9;0.00515982!10766-110F1;0.00193703!10824-111C5;0.00511158!10825-111C6;0.00884843!10826-111C7;0.00510495!10454-106G4;0.00553937!10409-106B4;0.00538201!10638-108I8;0.00173511!10636-108I6;0.00181202!10513-107D9;0.00215886!10420-106C6;0.000286094!10082-102B1;0.121086!10014-101C5;0.00396689!10070-101I7;0.0111963!10452-106G2;0.0024929!10453-106G3;0.0353532!10449-106F8;0.0257652!10042-101F6;0.0234042!10069-101I6;3.80013e-06!10193-103E4;0.000128701!10631-108I1;7.54676e-06!10438-106E6;0.00307562!10488-107B2;0.0315574!10196-103E7;0.0021893!10071-101I8;0.00105361!10071-101I8;0.000558401!10041-101F5;2.3015e-05!10451-106G1;0.000969346!10450-106F9;0.00739855!10604-108F1;0.00543646!10605-108F2;0.00490383!10606-108F3;0.00282023!10603-108E9;0.00886324!10497-107C2;0.00493365!10448-106F7;0.0141579!10643-109A4;0.00277389!10426-106D3;0.017425!10431-106D8;0.000144999!10197-103E8;0.000800023!10443-106F2;0.00087466!10815-111B5;0.00866539!10816-111B6;4.87815e-07!10817-111B7;9.71973e-07!10015-101C6;4.27079e-07!10410-106B5;0.00935061!10054-101G9;0.267039!10758-110E2;3.41073e-06!10711-109H9;0.048398!10040-101F4;0.00650526!10470-106I2;8.45598e-06!10415-106C1;1.01022e-05!10198-103E9;0.0198643!10614-108G2;0.00258645!10612-108F9;0.00054655!10549-107H9;0.000392208!10615-108G3;0.0267844!10487-107B1;0.373441!10433-106E1;0.00508014!10688-109F4;0.00303128!10444-106F3;0.00171462!10444-106F3;0.44716!10485-107A8;0.598301!10413-106B8;0.000709381!10175-103C4;0.553257!10161-103A8;1.51196e-05!12131-128D7;1.49399e-05!10624-108H3;0.0701267!10712-109I1;0.741392!10205-103F7;0.0269998!10206-103F8;9.65901e-05!10207-103F9;0.000209121!10050-101G5;0.00621452!10051-101G6;0.0240152!10016-101C7;0.00979609!10046-101G1;0.00457627!10778-110G4;0.000524083!10633-108I3;0.0221732!10818-111B8;0.0895548!10819-111B9;0.00575621!10820-111C1;0.00527893!10484-107A7;0.00741427!10808-111A7;0.00189002!10169-103B7;0.0190338!10153-102I9;2.15477e-05!13425-144D5;3.9809e-06!13433-144E4;0.0358305!13437-144E8;0.0346578!11904-125F5;0.0308185!11905-125F6;0.0560931!10039-101F3;0.00760446!10791-110H8;2.57951e-06!10017-101C8;0.00354586!10045-101F9;0.202402!10509-107D5;0.0106337!10839-111E2;0.00282272!10692-109F8;0.000764383!10079-102A7;0.00318683!10078-102A6;0.00111518!10721-110A1;0.021228!10569-108B2;0.0302397!10570-108B3;0.00560513!10571-108B4;0.0104924!10647-109A8;0.00471268!10752-110D5;0.0595384!10782-110G8;0.0108085!10726-110A6;0.0226048!10018-101C9;0.0142305!10086-102B5;0.678992!10182-103D2;0.513177!10165-103B3;1.71598e-06!10499-107C4;1.33758e-06!10408-106B3;0.00286193!10019-101D1;0.00510447!10068-101I5;0.0296055!10075-102A3;0.0141243!10077-102A5;0.0387684!10727-110A7;0.410681!10775-110G1;0.00108189!10412-106B7;0.00168342!12231-129F8;0.0397915!12232-129F9;0.356669!12233-129G1;0.336973!12234-129G2;0.252905!10414-106B9;0.864337!10170-103B8;0.0690955!10183-103D3;1.24208e-05!10150-102I6;1.45926e-05!10174-103C3;8.2704e-06!10155-103A2;9.48644e-06!10038-101F2;3.27038e-06!10838-111E1;1.18553e-06!10759-110E3;0.59061!10514-107E1;0.0108141!10465-106H6;0.0945204!10691-109F7;0.077085!10843-111E6;0.000766474!10844-111E7;0.802612!11747-123G1;0.374088!11748-123G2;0.244893!11749-123G3;0.169271!11750-123G4;0.583926!11751-123G5;0.204402!11840-124H4;0.0548399!11752-123G6;0.111829!11753-123G7;0.583067!11754-123G8;0.290723!11755-123G9;0.17805!11756-123H1;0.832244!11833-124G6;0.164683!11760-123H5;0.77718!11836-124G9;0.102395!11758-123H3;0.070155!11835-124G8;0.0489486!11762-123H7;0.100285!11838-124H2;0.132231!11757-123H2;0.209575!11759-123H4;0.403577!11761-123H6;0.116671!11842-124H6;0.125556!11837-124H1;0.247133!10568-108B1;0.136865!13230-141I8;0.363214!13231-141I9;0.0126604!10696-109G3;0.0107661!10493-107B7;0.0922369!10494-107B8;0.00965544!10850-111F4;0.00378572!10851-111F5;0.000192415!10852-111F6;0.0234708!10853-111F7;0.419376!10854-111F8;4.61245e-05!10855-111F9;0.0302933!10856-111G1;0.848614!10847-111F1;0.17705!10846-111E9;0.00569819!10848-111F2;0.0176373!10845-111E8;0.000133881!10857-111G2;0.00176065!10858-111G3;0.000137159!10156-103A3;0.00118751!11901-125F2;5.73267e-06!11902-125F3;0.00340402!11903-125F4;0.00122859!10689-109F5;0.00112589!10648-109A9;0.0167111!10784-110H1;0.0140933!10744-110C6;0.00421542!10772-110F7;0.0900007!10474-106I6;0.000166681!10600-108E6;0.00022578!10684-109E9;0.033382!12226-129F3;0.41064!12227-129F4;0.00875775!10508-107D4;0.0253526!10539-107G8;0.133023!10607-108F4;0.0418619!10555-107I6;0.0988332!10774-110F9;0.459265!10637-108I7;0.00450583!10663-109C6;0.560147!10728-110A8;0.0301711!10729-110A9;0.163778!10430-106D7;0.0426861!10730-110B1;0.0309555!10813-111B3;0.911726!10812-111B2;0.0992532!10037-101F1;0.945218!10172-103C1;3.3957e-06!10163-103B1;5.938e-05!10076-102A4;6.45332e-06!10073-102A1;3.67773e-06!10036-101E9;3.60373e-05!10195-103E6;2.51776e-06!10277-104E7;7.94295e-06!10434-106E2;0.000141117!10550-107I1;0.0158852!10545-107H5;0.00732979!10544-107H4;0.000186095!10704-109H2;9.53734e-05!10510-107D6;0.197885!10558-107I9;0.0504626!10020-101D2;0.806611!10732-110B3;0.00964897!10049-101G4;0.83135!10698-109G5;0.257371!10437-106E5;0.0144469!10417-106C3;0.000307429!10035-101E8;0.00338266!10171-103B9;3.94642e-06!10157-103A4;1.24846e-05!10034-101E7;9.37934e-06!10072-101I9;4.18662e-06!10199-103F1;0.000117202!10200-103F2;0.0412222!10697-109G4;0.000119654!10723-110A3;0.0810961!10179-103C8;0.00240862!10160-103A7;6.65378e-07!10180-103C9;1.0426e-05!10162-103A9;8.812e-07!10021-101D3;2.84804e-05!10840-111E3;0.286351!10706-109H4;0.00209477!10033-101E6;0.0122383!10032-101E5;1.5613e-06!10490-107B4;3.50319e-06!10439-106E7;8.63495e-05!10022-101D4;0.0124448!10176-103C5;0.000204423!10469-106I1;2.34892e-05!10067-101I4;0.00548502!10411-106B6;8.35511e-06!10471-106I3;0.0125264!10030-101E3;0.00245179!10475-106I7;1.09911e-05!10787-110H4;0.269142!10477-106I9;0.0246686!10695-109G2;0.989482!11771-123I7;0.01978!11772-123I8;0.000118294!11773-123I9;0.00052774!10093-102C3;0.396316!10442-106F1;0.0105151!10442-106F1;0.00420631!10201-103F3;0.00704062!10639-108I9;0.00147915!11843-124H7;0.0390898!11841-124H5;0.0140711!10693-109F9;0.0517829!10436-106E4;0.287649!10483-107A6;0.00232344!10282-104F3;0.00364209!10023-101D5;0.00578695!10066-101I3;0.00203139!10065-101I2;0.000300041!10800-110I8;0.000180766!10610-108F7;0.523922!10841-111E4;0.763046!10541-107H1;0.476919!10842-111E5;0.237829!10562-108A4;0.558505!10024-101D6;0.761975!10064-101I1;0.0244567!10609-108F6;0.0012778!10048-101G3;0.722921!10781-110G7;0.000215993!10181-103D1;0.935149!10159-103A6;4.69452e-06!10056-101H2;2.60158e-06!10737-110B8;1.17762e-06!10025-101D7;0.108774!10044-101F8;0.303241!10424-106D1;0.0715237!10463-106H4;7.90757e-05!10616-108G4;0.00202372!10486-107A9;0.00630203!10062-101H8;0.00291815!10202-103F4;0.00159514!10158-103A5;0.00570054!10441-106E9;1.39749e-05!10031-101E4;0.146611!10063-101H9;2.44446e-06!10063-101H9;3.1681e-05!11763-123H8;0.000220205!11765-123I1;0.0627756!11768-123I4;0.0517319!10807-111A6;0.0960305!10790-110H7;0.075544!10798-110I6;0.0165586!10786-110H3;0.390207!10591-108D6;0.0374287!10593-108D8;0.0495828!10590-108D5;0.136136!10026-101D8;0.000473251!10096-102C6;0.0382145!10168-103B6;0.983278!10154-103A1;4.69073e-05!10209-103G2;9.92837e-06!10061-101H7;0.00089918!10027-101D9;2.41736e-05!10043-101F7;0.069815!10783-110G9;0.582278!10028-101E1;0.0182369!10060-101H6;0.0879018!10203-103F5;0.00066769!10059-101H5;0.000965694!10047-101G2;0.000182523!10029-101E2;0.0131362!10058-101H4;0.0100853!10418-106C4;5.59886e-05!10492-107B6;0.0117101!10694-109G1;0.00125168!10797-110I5;0.0424008!10057-101H3;0.0166898!10100-102D1;0.000175175!10055-101H1;0.00145388!10204-103F6;0.00025371!10191-103E2;0.00132346!10563-108A5;0.00825405
|name=CNhs11344_bl_f2
|name=CNhs11344_bl_f2
|tomtom_result=CRZ1#MA0285.1;0;0.000819352;0.390011;0.780023;9;GGGGCTGCTG;GTGGCTTAG;-!DOT6#MA0351.1;9;0.00777134;3.69916;1;10;GGGGCTGCTG;AGGATGCGATGAGGTGCAGAA;-!Mafb#MA0117.1;-3;0.00872992;4.15544;1;7;GGGGCTGCTG;GCTGACGG;+!NHLH1#MA0048.1;2;0.00941152;4.47988;1;10;GGGGCTGCTG;GCGCAGCTGCGT;+!TOD6#MA0350.1;9;0.0127144;6.05205;1;10;GGGGCTGCTG;AAAACGCGATGAGCTGTGCCT;-!btd#MA0443.1;2;0.0136725;6.50812;1;8;GGGGCTGCTG;AGGGGGCGGA;+!ACE2#MA0267.1;-2;0.014915;7.09956;1;7;GGGGCTGCTG;TGCTGGT;-!Zfx#MA0146.1;0;0.0157256;7.48537;1;10;GGGGCTGCTG;GGGGCCGAGGCCTG;+!che-1#MA0260.1;-2;0.0165783;7.89127;1;6;GGGGCTGCTG;GGTTTC;-!SP1#MA0079.1;0;0.0166603;7.9303;1;10;GGGGCTGCTG;GGGGCGGGGT;+!AFT2#MA0270.1;-1;0.0170672;8.12398;1;8;GGGGCTGCTG;GGGGTGTG;-!SOK2#MA0385.1;-1;0.019997;9.51859;1;9;GGGGCTGCTG;TGCCTGCAGGT;-!BRCA1#MA0133.1;-1;0.0202056;9.61787;1;7;GGGGCTGCTG;GTGTTGT;-
}}
}}

Latest revision as of 14:30, 7 September 2012

Full Name: CNhs11344_bl_f2

Motif matrix
POACGT
147.2116885124828220.9329842219453103.25274419985928100.63454992473847
253.814607224589498.334959561478414182.217699676595527.664700396362395
364.365789494509560.16628435332076533207.333608657874780.16628435332076533
40.00.0271.430554556477660.6014123025480969
50.0272.03196685902580.00.0
60.00.00.0272.0319668590258
70.00.0209.521195348175762.51077151085012
857.25713082875244149.410022736604644.1181680535887921.24664524007996
953.4388331904066846.6742642535452271.91003199321234100.00883742186161
1015.24572205859436760.757175875236435149.6231922237571446.40587670143788

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.100.0008193520.3900110.7800239GGGGCTGCTGGTGGCTTAG-
DOT6#MA0351.190.007771343.69916110GGGGCTGCTGAGGATGCGATGAGGTGCAGAA-
Mafb#MA0117.1-30.008729924.1554417GGGGCTGCTGGCTGACGG+
NHLH1#MA0048.120.009411524.47988110GGGGCTGCTGGCGCAGCTGCGT+
TOD6#MA0350.190.01271446.05205110GGGGCTGCTGAAAACGCGATGAGCTGTGCCT-
btd#MA0443.120.01367256.5081218GGGGCTGCTGAGGGGGCGGA+
ACE2#MA0267.1-20.0149157.0995617GGGGCTGCTGTGCTGGT-
Zfx#MA0146.100.01572567.48537110GGGGCTGCTGGGGGCCGAGGCCTG+
che-1#MA0260.1-20.01657837.8912716GGGGCTGCTGGGTTTC-
SP1#MA0079.100.01666037.9303110GGGGCTGCTGGGGGCGGGGT+
AFT2#MA0270.1-10.01706728.1239818GGGGCTGCTGGGGGTGTG-
SOK2#MA0385.1-10.0199979.5185919GGGGCTGCTGTGCCTGCAGGT-
BRCA1#MA0133.1-10.02020569.6178717GGGGCTGCTGGTGTTGT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:CNhs11344_bl_f2&oldid=2134386"