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MacroAPE 1083:NFKB1 REL RELA: Difference between revisions

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0-103B8;2.90724e-08!10183-103D3;7.26543e-05!10150-102I6;0.000118905!10174-103C3;0.000782122!10155-103A2;0.1301!10038-101F2;0.0651032!10838-111E1;0.0934641!10759-110E3;4.30597e-05!10514-107E1;0.000682469!10465-106H6;0.00525471!10691-109F7;0.00306349!10843-111E6;5.24099e-07!10844-111E7;4.22603e-12!11747-123G1;5.45531e-13!11748-123G2;0.496451!11749-123G3;0.411473!11750-123G4;0.328546!11751-123G5;0.00883905!11840-124H4;0.0333005!11752-123G6;0.00176921!11753-123G7;0.000437946!11754-123G8;0.0162986!11755-123G9;0.033204!11756-123H1;0.0414722!11833-124G6;0.00114637!11760-123H5;5.00152e-06!11836-124G9;0.000626177!11758-123H3;0.0226617!11835-124G8;0.0408982!11762-123H7;0.00238943!11838-124H2;0.000876533!11757-123H2;0.0514061!11759-123H4;0.1267!11761-123H6;0.000491597!11842-124H6;1.09313e-05!11837-124H1;0.00141895!10568-108B1;0.00216213!13230-141I8;0.145548!13231-141I9;0.322568!10696-109G3;0.514516!10493-107B7;0.375619!10494-107B8;0.569111!10850-111F4;0.209938!10851-111F5;0.0774047!10852-111F6;0.162868!10853-111F7;0.0424884!10854-111F8;0.35277!10855-111F9;0.000254579!10856-111G1;0.13659!10847-111F1;7.31575e-05!10846-111E9;0.0621818!10848-111F2;0.264383!10845-111E8;0.115033!10857-111G2;0.00431781!10858-111G3;0.0270072!10156-103A3;0.0603585!11901-125F2;0.00105509!11902-125F3;6.60572e-05!11903-125F4;0.000238527!10689-109F5;3.08271e-05!10648-109A9;0.570125!10784-110H1;0.00396006!10744-110C6;0.480314!10772-110F7;4.07433e-06!10474-106I6;0.00342676!10600-108E6;0.736986!10684-109E9;0.000109073!12226-129F3;0.0396514!12227-129F4;0.0913825!10508-107D4;0.42336!10539-107G8;1.22661e-12!10607-108F4;3.03638e-09!10555-107I6;2.30256e-07!10774-110F9;1.5183e-10!10637-108I7;1.26158e-06!10663-109C6;7.10909e-05!10728-110A8;4.99122e-05!10729-110A9;5.96895e-05!10430-106D7;0.19576!10730-110B1;0.00686365!10813-111B3;4.88749e-08!10812-111B2;0.659238!10037-101F1;0.13604!10172-103C1;0.000450129!10163-103B1;1.11665e-05!10076-102A4;0.000995293!10073-102A1;0.000235151!10036-101E9;2.41406e-07!10195-103E6;0.000180197!10277-104E7;0.000213601!10434-106E2;0.00042711!10550-107I1;0.0258353!10545-107H5;0.0226315!10544-107H4;0.69184!10704-109H2;0.27226!10510-107D6;0.993397!10558-107I9;0.266668!10020-101D2;1.98526e-08!10732-110B3;0.185583!10049-101G4;0.0990316!10698-109G5;0.113138!10437-106E5;0.000660864!10417-106C3;0.795545!10035-101E8;0.000399123!10171-103B9;0.000154517!10157-103A4;2.55843e-05!10034-101E7;0.000893247!10072-101I9;0.000103077!10199-103F1;8.34176e-08!10200-103F2;0.316762!10697-109G4;0.0230711!10723-110A3;0.032194!10179-103C8;0.0638959!10160-103A7;0.00021425!10180-103C9;1.11886e-05!10162-103A9;3.00225e-07!10021-101D3;2.12281e-05!10840-111E3;0.0420796!10706-109H4;0.0146384!10033-101E6;0.0466241!10032-101E5;0.000333475!10490-107B4;6.64053e-05!10439-106E7;0.0440714!10022-101D4;0.00113681!10176-103C5;0.0876439!10469-106I1;5.27592e-05!10067-101I4;0.269148!10411-106B6;0.859099!10471-106I3;5.47104e-05!10030-101E3;0.000130897!10475-106I7;0.903146!10787-110H4;1.84122e-09!10477-106I9;0.0221062!10695-109G2;2.9798e-06!11771-123I7;0.350494!11772-123I8;0.465368!11773-123I9;0.744804!10093-102C3;0.872504!10442-106F1;0.483754!10442-106F1;0.145453!10201-103F3;0.10658!10639-108I9;0.811955!11843-124H7;0.113393!11841-124H5;0.11526!10693-109F9;0.0635662!10436-106E4;1.41325e-06!10483-107A6;0.0064121!10282-104F3;0.0202338!10023-101D5;0.286249!10066-101I3;0.102742!10065-101I2;0.888928!10800-110I8;0.123369!10610-108F7;1.28325e-05!10841-111E4;8.08993e-08!10541-107H1;3.57462e-08!10842-111E5;5.11011e-08!10562-108A4;1.30627e-07!10024-101D6;0.000186214!10064-101I1;0.00245629!10609-108F6;0.12645!10048-101G3;5.96388e-09!10781-110G7;0.0956268!10181-103D1;1.56439e-07!10159-103A6;0.162495!10056-101H2;0.0175591!10737-110B8;0.186277!10025-101D7;0.483595!10044-101F8;8.28386e-08!10424-106D1;2.73682e-07!10463-106H4;0.2037!10616-108G4;0.658954!10486-107A9;0.424574!10062-101H8;0.060617!10202-103F4;0.473418!10158-103A5;0.0222316!10441-106E9;0.0107276!10031-101E4;1.32697e-10!10063-101H9;0.000538408!10063-101H9;3.32366e-07!11763-123H8;0.0484424!11765-123I1;0.0219907!11768-123I4;0.103638!10807-111A6;0.316051!10790-110H7;0.00140213!10798-110I6;2.31377e-05!10786-110H3;0.00642143!10591-108D6;0.00104836!10593-108D8;0.000618476!10590-108D5;0.000312787!10026-101D8;0.00146296!10096-102C6;0.284781!10168-103B6;1.94029e-07!10154-103A1;0.0016598!10209-103G2;0.00216314!10061-101H7;0.00696118!10027-101D9;0.453204!10043-101F7;0.183149!10783-110G9;0.000281142!10028-101E1;0.342519!10060-101H6;0.892801!10203-103F5;0.786456!10059-101H5;0.00131479!10047-101G2;0.0649191!10029-101E2;1.91588e-05!10058-101H4;0.000210309!10418-106C4;0.11269!10492-107B6;0.635053!10694-109G1;0.577215!10797-110I5;0.848019!10057-101H3;0.00625602!10100-102D1;0.395945!10055-101H1;0.0359331!10204-103F6;0.867246!10191-103E2;0.0506501!10563-108A5;8.45855e-05
|name=NFKB1_REL_RELA
|name=NFKB1_REL_RELA
|tomtom_result=NF-kappaB#MA0061.1;0;2.2289e-09;1.06096e-06;2.05609e-06;10;GGGGATTTCCC;GGGAATTTCC;+!RELA#MA0107.1;0;4.34816e-09;2.06973e-06;2.05609e-06;10;GGGGATTTCCC;GGGAATTTCC;+!REL#MA0101.1;0;1.04501e-08;4.97424e-06;3.29431e-06;10;GGGGATTTCCC;GGGGATTTCC;+!NFKB1#MA0105.1;0;2.79778e-07;0.000133175;5.74283e-05;11;GGGGATTTCCC;GGGGATTCCCC;+!dl_2#MA0023.1;0;3.03619e-07;0.000144523;5.74283e-05;10;GGGGATTTCCC;GGGGATTTCC;+!dl_1#MA0022.1;1;4.90894e-05;0.0233666;0.00580316;11;GGGGATTTCCC;GGGGTTTTTCCC;+!ETS1#MA0098.1;-5;0.0129439;6.16132;0.910517;6;GGGGATTTCCC;CTTCCG;+!TP53#MA0106.1;8;0.0148267;7.05753;0.910517;11;GGGGATTTCCC;ACATGCCCGGGCATGTCCGG;-!NFATC2#MA0152.1;-4;0.0148673;7.07682;0.910517;7;GGGGATTTCCC;TTTTCCA;+!TEC1#MA0406.1;-3;0.0151502;7.21147;0.910517;8;GGGGATTTCCC;ACATTCCC;+!SPI1#MA0080.1;-5;0.0154043;7.33244;0.910517;6;GGGGATTTCCC;CTTCCG;-!Su(H)#MA0085.1;1;0.0171928;8.18379;0.956456;11;GGGGATTTCCC;ATCTCGGTTCCCACAA;-!YPR196W#MA0437.1;-3;0.0185864;8.84713;0.9691;8;GGGGATTTCCC;ATTTCTCCG;+!CRZ1#MA0285.1;0;0.0194695;9.2675;0.9691;9;GGGGATTTCCC;GTGGCTTAG;-
}}
}}

Latest revision as of 14:28, 7 September 2012

Full Name: NFKB1_REL_RELA

Motif matrix
null

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
NF-kappaB#MA0061.102.2289e-091.06096e-062.05609e-0610GGGGATTTCCCGGGAATTTCC+
RELA#MA0107.104.34816e-092.06973e-062.05609e-0610GGGGATTTCCCGGGAATTTCC+
REL#MA0101.101.04501e-084.97424e-063.29431e-0610GGGGATTTCCCGGGGATTTCC+
NFKB1#MA0105.102.79778e-070.0001331755.74283e-0511GGGGATTTCCCGGGGATTCCCC+
dl_2#MA0023.103.03619e-070.0001445235.74283e-0510GGGGATTTCCCGGGGATTTCC+
dl_1#MA0022.114.90894e-050.02336660.0058031611GGGGATTTCCCGGGGTTTTTCCC+
ETS1#MA0098.1-50.01294396.161320.9105176GGGGATTTCCCCTTCCG+
TP53#MA0106.180.01482677.057530.91051711GGGGATTTCCCACATGCCCGGGCATGTCCGG-
NFATC2#MA0152.1-40.01486737.076820.9105177GGGGATTTCCCTTTTCCA+
TEC1#MA0406.1-30.01515027.211470.9105178GGGGATTTCCCACATTCCC+
SPI1#MA0080.1-50.01540437.332440.9105176GGGGATTTCCCCTTCCG-
Su(H)#MA0085.110.01719288.183790.95645611GGGGATTTCCCATCTCGGTTCCCACAA-
YPR196W#MA0437.1-30.01858648.847130.96918GGGGATTTCCCATTTCTCCG+
CRZ1#MA0285.100.01946959.26750.96919GGGGATTTCCCGTGGCTTAG-
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