FFCP PHASE1:Hg19::chr22:46493889..46493892,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:46493889..46493892,+
|short_description=p@chr22:46493889..46493892,+
|description=CAGE_peak_at_chr22:46493889..46493892,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:46493889..46493892,+ | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_at_chr22:46493889..46493892,+ | |||
|id=chr22:46493889..46493892,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.84e-21!180;CL:0000220!7.76e-18!246;CL:0002321!2.37e-17!248;CL:0000222!1.04e-15!119;CL:0000183!2.24e-13!59;CL:0000680!3.25e-13!57;CL:0000056!3.25e-13!57;CL:0000355!3.25e-13!57;CL:0002371!6.29e-13!591;CL:0000548!8.88e-13!679;CL:0000004!8.88e-13!679;CL:0000255!8.88e-13!679;CL:0000187!1.94e-12!54;CL:0000012!2.39e-12!682;CL:0000192!7.41e-11!42;CL:0000514!7.41e-11!42;CL:0000144!2.35e-10!625;CL:0000393!8.63e-10!60;CL:0000211!8.63e-10!60;CL:0000359!1.67e-08!32;CL:0000003!1.86e-08!722;CL:0000057!5.09e-07!75;CL:0002078!5.75e-07!44;CL:0002139!7.04e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002603;4.29e-11;3!CL:0000346;7.13e-11;3!CL:1000428;7.13e-11;3!CL:0002596;1.53e-08;2!CL:0000128;5.41e-08;7!CL:0000126;5.41e-08;7!CL:0000127;5.41e-08;7!CL:0002570;4.29e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.87e-11,3;CL:1000428,2.87e-11,3;CL:0002603,4.48e-11,3;CL:0002596,1.52e-08,2;CL:0000128,8.01e-08,7;CL:0000126,8.01e-08,7;CL:0000127,8.01e-08,7;CL:0002453,8.01e-08,7;CL:0000192,1.60e-07,43;CL:0000514,1.60e-07,43;CL:0002570,3.10e-07,8;CL:0002321,3.47e-07,250;CL:0002559,6.61e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.31e-19!82;UBERON:0000914!1.09e-16!83;UBERON:0002329!1.09e-16!83;UBERON:0003077!1.09e-16!83;UBERON:0003059!1.09e-16!83;UBERON:0007282!1.09e-16!83;UBERON:0009618!1.09e-16!83;UBERON:0007285!1.09e-16!83;UBERON:0004290!3.63e-15!70;UBERON:0002049!1.02e-13!79;UBERON:0007798!1.02e-13!79;UBERON:0001134!6.57e-13!61;UBERON:0002036!6.57e-13!61;UBERON:0003082!6.57e-13!61;UBERON:0005256!8.66e-13!143;UBERON:0002385!1.64e-12!63;UBERON:0001015!1.64e-12!63;UBERON:0000383!1.64e-12!63;UBERON:0002100!4.09e-11!216;UBERON:0000490!5.48e-11!138;UBERON:0000055!6.37e-11!69;UBERON:0001637!2.07e-10!42;UBERON:0003509!2.07e-10!42;UBERON:0004572!2.07e-10!42;UBERON:0000119!3.55e-10!312;UBERON:0004573!3.99e-10!33;UBERON:0004571!3.99e-10!33;UBERON:0001981!9.98e-10!60;UBERON:0007500!9.98e-10!60;UBERON:0004537!9.98e-10!60;UBERON:0006965!9.98e-10!60;UBERON:0000475!1.71e-09!365;UBERON:0000483!1.76e-09!309;UBERON:0004535!1.85e-09!110;UBERON:0003104!2.21e-09!238;UBERON:0009142!2.21e-09!238;UBERON:0001009!1.02e-08!113;UBERON:0004872!4.17e-07!84;UBERON:0003914!5.86e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;7.13e-11;3!UBERON:0001992;7.13e-11;3!UBERON:0005396;1.53e-08;2!UBERON:0004573;1.70e-07;33!UBERON:0004571;1.70e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.87e-11,3;UBERON:0001992,2.87e-11,3;UBERON:0000486,4.32e-10,83;UBERON:0002329,8.08e-10,71;UBERON:0003059,8.08e-10,71;UBERON:0007282,8.08e-10,71;UBERON:0004290,8.08e-10,71;UBERON:0009618,8.08e-10,71;UBERON:0003077,1.26e-09,72;UBERON:0007285,1.26e-09,72;UBERON:0007524,1.93e-09,73;UBERON:0004573,8.62e-09,33;UBERON:0004571,8.62e-09,33;UBERON:0007503,1.39e-08,78;UBERON:0005396,1.52e-08,2;UBERON:0000055,6.32e-08,68;UBERON:0002049,1.77e-07,78;UBERON:0007798,1.77e-07,78;UBERON:0007500,4.18e-07,59;UBERON:0001981,4.18e-07,59;UBERON:0004537,4.18e-07,59;UBERON:0006965,4.18e-07,59;UBERON:0002073,6.61e-07,5;UBERON:0005086,6.61e-07,5 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0.218441372130172,0,1.8564952944007,0.331397375727916,0,0,0.730310090387373,0.487932798790507,2.58554221961255,2.04000691244253,1.25381888591235,0.85870796139317,0.958120975510189,1.00434111675842,0,0,0,0,0,0,3.67768489791571,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.895037932904712,0.722878304769133,2.00535164254356,0.144846518960824,0,0,0.567208902984407,0.443458794925128,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,2.58070378531837,1.73570250803797,0,0.419499436209906,0.275118041940067,0.835979866147242,1.29208379584664,0.35576626268671,0,2.01414658554573,0.760272105718513,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0.225222960966644,1.53316637465883,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0,0,0.709336764396714,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.756787138224657,0,0,0,1.1409436430889,0.149448680551801,0.352303495931295,0,0.280901613404497,1.02077085627447,0,0.516628905878827,0,0.741800787835671,0,1.43723628363248,1.0100166837244,0,0,0.877955241761676,1.83892677479412,0.600952235626387,0.226864366320042,0,0.85422955527427,1.05965950579781,0,1.44273540933814,0,1.8611685633159,0.337552664482532,0.974370051611986,0.252433774244115,0.644349290496095,0.646584227275248,0,0.604512589365842,2.37384829234683,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,1.92972281457866,5.52539685409922,0,0.721879481669586,0,0.337169380156203,0,0.220587945464788,0,0,0.539325232640658,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0,0.433099343283221,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0.503946384596579,0.425325291727159,0.447792613514241,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0,21.4593867511129,1.690605505112,0.26593811658487,0,1.54324424557285,1.41849132023278,0.266422179016099,0.57191197463259,0.542621605391443,0,0.977208552881205,0,0,0,0.871533458600294,0,0,0,0,0.718874566474748,0,1.42636905040718,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.2269149171914,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.737476674166813,0.781952530212746,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0.710246901252508,0.492762936082855,0,0.697262270759755,0.120859449591622,0.200506470303285,0.184161977871793,0,0.364182336013434,0.524497659837696,0,0.385076685522074,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.812839312631559,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0.676695028044854,0,0.614014698904518,0,0.537101224341368,0.580066775656914,0.426133137080504,0.356128142586949,0,0,0,0,0.929691098594572,0.31481234683064,5.5762981612848,0.924100740528266,1.06461206063404,6.95946393660058,0.74129687641568,0,0.744316738719335,0.316379424718726,0,1.02359116524534,0.855877976067841,7.95508119814842,4.70969184119538,1.2591072030832,0.274537029736055,0.235624804691373,1.41527737101321,0,0.421258456238981,0.48763373908959,0.974853958525138,2.11300293513511,0.545999645631943,0.282810863907425,0,4.41092274836899,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,5.32141596105897,1.05553817648832,0.658589785919804,1.13841952129715,0.699869440489966,0.288666338176536,0.670302275535787,3.26672954583968,0,0.86101074534246,1.68471475667626,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.667396566847634,0,0,0,0.270455678475983,0,0,0.37428108081644,0,0.121360521749513,0,0,0,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0,0,0.306806047506464,0,0.933118762985422,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0,0,0,0,1.64875668123352,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0.432777279484182,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0,0.685946781900644,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0.193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| ||
|short_description=p@chr22:46493889..46493892,+ | |||
}} | }} |
Latest revision as of 22:08, 28 July 2015
Short description: | p@chr22:46493889..46493892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:46493889..46493892, + |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.87e-11 | 3 |
stem cell of epidermis | 2.87e-11 | 3 |
astrocyte of the cerebellum | 4.48e-11 | 3 |
smooth muscle cell of the carotid artery | 1.52e-08 | 2 |
oligodendrocyte | 8.01e-08 | 7 |
macroglial cell | 8.01e-08 | 7 |
astrocyte | 8.01e-08 | 7 |
oligodendrocyte precursor cell | 8.01e-08 | 7 |
smooth muscle cell | 1.60e-07 | 43 |
smooth muscle myoblast | 1.60e-07 | 43 |
mesenchymal stem cell of adipose | 3.10e-07 | 8 |
embryonic cell | 3.47e-07 | 250 |
hair follicle cell | 6.61e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.87e-11 | 3 |
papillary layer of dermis | 2.87e-11 | 3 |
multilaminar epithelium | 4.32e-10 | 83 |
somite | 8.08e-10 | 71 |
presomitic mesoderm | 8.08e-10 | 71 |
presumptive segmental plate | 8.08e-10 | 71 |
dermomyotome | 8.08e-10 | 71 |
trunk paraxial mesoderm | 8.08e-10 | 71 |
paraxial mesoderm | 1.26e-09 | 72 |
presumptive paraxial mesoderm | 1.26e-09 | 72 |
dense mesenchyme tissue | 1.93e-09 | 73 |
systemic artery | 8.62e-09 | 33 |
systemic arterial system | 8.62e-09 | 33 |
epithelial vesicle | 1.39e-08 | 78 |
carotid artery segment | 1.52e-08 | 2 |
vessel | 6.32e-08 | 68 |
vasculature | 1.77e-07 | 78 |
vascular system | 1.77e-07 | 78 |
epithelial tube open at both ends | 4.18e-07 | 59 |
blood vessel | 4.18e-07 | 59 |
blood vasculature | 4.18e-07 | 59 |
vascular cord | 4.18e-07 | 59 |
hair follicle | 6.61e-07 | 5 |
hair follicle placode | 6.61e-07 | 5 |