FFCP PHASE1:Hg19::chr1:209824511..209824521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3914 | |EntrezGene=3914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6490 | |HGNC=6490 | ||
|TSSclassifier=strong | |||
|UniProt=Q13751 | |UniProt=Q13751 | ||
|association_with_transcript=157bp_to_ENST00000391911,NM_001017402,uc001hhg.2_5end | |association_with_transcript=157bp_to_ENST00000391911,NM_001017402,uc001hhg.2_5end | ||
|cluster_id=chr1:209824511..209824521,- | |||
|description=CAGE_peak_7_at_LAMB3_5end | |description=CAGE_peak_7_at_LAMB3_5end | ||
|id=chr1:209824511..209824521,- | |id=chr1:209824511..209824521,- | ||
|ontology_enrichment_celltype=CL:0000066!4.05e-15!254;CL:0002076!4.81e-11!43;CL:0000223!1.88e-08!59;CL:0002368!2.59e-08!13;CL:0000063!2.88e-08!578;CL:0000244!1.42e-07!4;CL:0000731!1.42e-07!4;CL:0000548!7.06e-07!679;CL:0000004!7.06e-07!679;CL:0000255!7.06e-07!679 | |ontology_enrichment_celltype=CL:0000066!4.05e-15!254;CL:0002076!4.81e-11!43;CL:0000223!1.88e-08!59;CL:0002368!2.59e-08!13;CL:0000063!2.88e-08!578;CL:0000244!1.42e-07!4;CL:0000731!1.42e-07!4;CL:0000548!7.06e-07!679;CL:0000004!7.06e-07!679;CL:0000255!7.06e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002262;9.46e-10;2!CL:1000398;9.46e-10;2!CL:0002166;8.62e-07;3 | |ontology_enrichment_celltype_v019=CL:0002262;9.46e-10;2!CL:1000398;9.46e-10;2!CL:0002166;8.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,9.46e-10,2;CL:1000398,9.46e-10,2;CL:0002166,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.24e-07;10!UBERON:0007687;1.24e-07;10 | |ontology_enrichment_development_v019=UBERON:0003918;1.24e-07;10!UBERON:0007687;1.24e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.26e-08!5;UBERON:0006554!3.09e-07!44;UBERON:0001008!5.63e-07!45;UBERON:0005910!7.08e-07!6 | |ontology_enrichment_uberon=UBERON:0000365!2.26e-08!5;UBERON:0006554!3.09e-07!44;UBERON:0001008!5.63e-07!45;UBERON:0005910!7.08e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;9.46e-10;2!UBERON:0003497;9.46e-10;2!UBERON:0003909;9.46e-10;2!UBERON:0003835;9.46e-10;2!UBERON:0006554;3.63e-09;30!UBERON:0001008;3.63e-09;30!UBERON:0001280;6.50e-07;3!UBERON:0004647;6.50e-07;3!UBERON:0002113;7.77e-07;24!UBERON:0011143;7.77e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001281;9.46e-10;2!UBERON:0003497;9.46e-10;2!UBERON:0003909;9.46e-10;2!UBERON:0003835;9.46e-10;2!UBERON:0006554;3.63e-09;30!UBERON:0001008;3.63e-09;30!UBERON:0001280;6.50e-07;3!UBERON:0004647;6.50e-07;3!UBERON:0002113;7.77e-07;24!UBERON:0011143;7.77e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,9.46e-10,2;UBERON:0003497,9.46e-10,2;UBERON:0003909,9.46e-10,2;UBERON:0003835,9.46e-10,2;UBERON:0001280,6.50e-07,3;UBERON:0004647,6.50e-07,3;UBERON:0005171,6.50e-07,3 | |||
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| ||
|short_description=p7@LAMB3 | |short_description=p7@LAMB3 | ||
}} | }} |
Latest revision as of 19:42, 24 September 2015
Short description: | p7@LAMB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LAMB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 157bp_to_ENST00000391911, NM_001017402, uc001hhg.2_5end |
EntrezGene: | LAMB3 |
HGNC: | 6490 |
UniProt: | Q13751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 9.46e-10 | 2 |
endothelial cell of hepatic sinusoid | 9.46e-10 | 2 |
epithelial cell of Malassez | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 9.46e-10 | 2 |
abdomen blood vessel | 9.46e-10 | 2 |
sinusoid | 9.46e-10 | 2 |
abdominal segment blood vessel | 9.46e-10 | 2 |
liver parenchyma | 6.50e-07 | 3 |
liver lobule | 6.50e-07 | 3 |
hepatic duct | 6.50e-07 | 3 |