FFCP PHASE1:Hg19::chr5:60600512..60600563,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:60600512..60600563,- | |||
|coexpression_cluster_id=C4510 | |coexpression_cluster_id=C4510 | ||
|description=CAGE_peak_at_chr5:60600512..60600563,- | |description=CAGE_peak_at_chr5:60600512..60600563,- | ||
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|ontology_enrichment_celltype=CL:0000220!4.48e-17!246;CL:0002321!1.56e-16!248;CL:0000192!7.14e-14!42;CL:0000514!7.14e-14!42;CL:0000680!7.25e-14!57;CL:0000056!7.25e-14!57;CL:0000355!7.25e-14!57;CL:0000359!7.61e-14!32;CL:0000187!8.83e-13!54;CL:0000055!1.79e-12!180;CL:0000222!2.15e-11!119;CL:0000183!1.15e-10!59;CL:0000076!2.25e-10!62;CL:0000057!4.93e-10!75;CL:0000393!8.75e-10!60;CL:0000211!8.75e-10!60;CL:0000066!1.67e-09!254;CL:0002076!1.76e-09!43;CL:0002539!1.23e-07!10 | |ontology_enrichment_celltype=CL:0000220!4.48e-17!246;CL:0002321!1.56e-16!248;CL:0000192!7.14e-14!42;CL:0000514!7.14e-14!42;CL:0000680!7.25e-14!57;CL:0000056!7.25e-14!57;CL:0000355!7.25e-14!57;CL:0000359!7.61e-14!32;CL:0000187!8.83e-13!54;CL:0000055!1.79e-12!180;CL:0000222!2.15e-11!119;CL:0000183!1.15e-10!59;CL:0000076!2.25e-10!62;CL:0000057!4.93e-10!75;CL:0000393!8.75e-10!60;CL:0000211!8.75e-10!60;CL:0000066!1.67e-09!254;CL:0002076!1.76e-09!43;CL:0002539!1.23e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.32e-16;32!CL:0000192;1.12e-11;43!CL:0002539;2.27e-10;10 | |ontology_enrichment_celltype_v019=CL:0000359;4.32e-16;32!CL:0000192;1.12e-11;43!CL:0002539;2.27e-10;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.04e-17,32;CL:0000192,8.32e-15,43;CL:0000514,8.32e-15,43;CL:0002321,4.10e-13,250;CL:0000680,3.63e-11,58;CL:0000056,3.63e-11,58;CL:0000355,3.63e-11,58;CL:0002539,2.35e-10,10;CL:0000187,2.44e-10,55;CL:0000057,9.56e-09,76;CL:0000076,1.37e-08,63;CL:0000393,2.16e-08,61;CL:0000211,2.16e-08,61;CL:0000222,4.96e-08,121;CL:0000066,3.25e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-11;43 | |ontology_enrichment_development_v019=CL:0000514;1.12e-11;43 | ||
|ontology_enrichment_disease=DOID:193!1.60e-08!29;DOID:120!4.73e-08!27;DOID:2394!1.27e-07!14;DOID:1749!8.15e-07!14 | |ontology_enrichment_disease=DOID:193!1.60e-08!29;DOID:120!4.73e-08!27;DOID:2394!1.27e-07!14;DOID:1749!8.15e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.94e-08;14!DOID:193;2.32e-08;29!DOID:120;4.63e-08;27!DOID:1749;1.57e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;1.94e-08;14!DOID:193;2.32e-08;29!DOID:120;4.63e-08;27!DOID:1749;1.57e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.83e-08,14;DOID:193,2.26e-08,29;DOID:120,4.44e-08,27;DOID:1749,2.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.62e-16!83;UBERON:0002329!1.62e-16!83;UBERON:0003077!1.62e-16!83;UBERON:0003059!1.62e-16!83;UBERON:0007282!1.62e-16!83;UBERON:0009618!1.62e-16!83;UBERON:0007285!1.62e-16!83;UBERON:0001637!2.23e-15!42;UBERON:0003509!2.23e-15!42;UBERON:0004572!2.23e-15!42;UBERON:0000475!5.85e-15!365;UBERON:0004573!1.13e-14!33;UBERON:0004571!1.13e-14!33;UBERON:0000490!1.21e-14!138;UBERON:0005256!4.34e-14!143;UBERON:0000486!2.14e-13!82;UBERON:0002100!1.00e-12!216;UBERON:0001134!2.12e-12!61;UBERON:0002036!2.12e-12!61;UBERON:0003082!2.12e-12!61;UBERON:0000481!3.22e-12!347;UBERON:0004290!4.03e-12!70;UBERON:0001981!9.06e-12!60;UBERON:0007500!9.06e-12!60;UBERON:0004537!9.06e-12!60;UBERON:0006965!9.06e-12!60;UBERON:0000483!2.06e-11!309;UBERON:0002385!2.06e-11!63;UBERON:0001015!2.06e-11!63;UBERON:0000383!2.06e-11!63;UBERON:0000119!3.50e-11!312;UBERON:0004872!1.12e-10!84;UBERON:0003102!1.37e-10!95;UBERON:0000467!2.89e-10!625;UBERON:0000480!4.14e-10!626;UBERON:0003104!4.45e-10!238;UBERON:0009142!4.45e-10!238;UBERON:0000947!1.02e-09!21;UBERON:0010191!1.02e-09!21;UBERON:0000055!2.24e-09!69;UBERON:0002049!3.97e-09!79;UBERON:0007798!3.97e-09!79;UBERON:0004119!7.83e-09!169;UBERON:0000925!7.83e-09!169;UBERON:0006595!7.83e-09!169;UBERON:0000468!9.63e-09!659;UBERON:0004111!9.89e-09!241;UBERON:0003914!2.10e-08!118;UBERON:0005156!2.69e-08!59;UBERON:0000990!2.69e-08!59;UBERON:0000477!4.78e-08!286;UBERON:0004237!1.23e-07!10;UBERON:0004695!1.23e-07!10;UBERON:0002111!1.23e-07!10;UBERON:0004178!1.23e-07!10;UBERON:0003134!1.50e-07!37;UBERON:0000474!1.50e-07!37;UBERON:0000923!6.45e-07!604;UBERON:0005291!6.45e-07!604;UBERON:0006598!6.45e-07!604;UBERON:0002532!6.45e-07!604;UBERON:0001007!6.59e-07!155;UBERON:0001555!6.59e-07!155;UBERON:0007026!6.59e-07!155;UBERON:0002050!8.62e-07!605;UBERON:0005423!8.62e-07!605;UBERON:0003100!9.51e-07!41 | |ontology_enrichment_uberon=UBERON:0000914!1.62e-16!83;UBERON:0002329!1.62e-16!83;UBERON:0003077!1.62e-16!83;UBERON:0003059!1.62e-16!83;UBERON:0007282!1.62e-16!83;UBERON:0009618!1.62e-16!83;UBERON:0007285!1.62e-16!83;UBERON:0001637!2.23e-15!42;UBERON:0003509!2.23e-15!42;UBERON:0004572!2.23e-15!42;UBERON:0000475!5.85e-15!365;UBERON:0004573!1.13e-14!33;UBERON:0004571!1.13e-14!33;UBERON:0000490!1.21e-14!138;UBERON:0005256!4.34e-14!143;UBERON:0000486!2.14e-13!82;UBERON:0002100!1.00e-12!216;UBERON:0001134!2.12e-12!61;UBERON:0002036!2.12e-12!61;UBERON:0003082!2.12e-12!61;UBERON:0000481!3.22e-12!347;UBERON:0004290!4.03e-12!70;UBERON:0001981!9.06e-12!60;UBERON:0007500!9.06e-12!60;UBERON:0004537!9.06e-12!60;UBERON:0006965!9.06e-12!60;UBERON:0000483!2.06e-11!309;UBERON:0002385!2.06e-11!63;UBERON:0001015!2.06e-11!63;UBERON:0000383!2.06e-11!63;UBERON:0000119!3.50e-11!312;UBERON:0004872!1.12e-10!84;UBERON:0003102!1.37e-10!95;UBERON:0000467!2.89e-10!625;UBERON:0000480!4.14e-10!626;UBERON:0003104!4.45e-10!238;UBERON:0009142!4.45e-10!238;UBERON:0000947!1.02e-09!21;UBERON:0010191!1.02e-09!21;UBERON:0000055!2.24e-09!69;UBERON:0002049!3.97e-09!79;UBERON:0007798!3.97e-09!79;UBERON:0004119!7.83e-09!169;UBERON:0000925!7.83e-09!169;UBERON:0006595!7.83e-09!169;UBERON:0000468!9.63e-09!659;UBERON:0004111!9.89e-09!241;UBERON:0003914!2.10e-08!118;UBERON:0005156!2.69e-08!59;UBERON:0000990!2.69e-08!59;UBERON:0000477!4.78e-08!286;UBERON:0004237!1.23e-07!10;UBERON:0004695!1.23e-07!10;UBERON:0002111!1.23e-07!10;UBERON:0004178!1.23e-07!10;UBERON:0003134!1.50e-07!37;UBERON:0000474!1.50e-07!37;UBERON:0000923!6.45e-07!604;UBERON:0005291!6.45e-07!604;UBERON:0006598!6.45e-07!604;UBERON:0002532!6.45e-07!604;UBERON:0001007!6.59e-07!155;UBERON:0001555!6.59e-07!155;UBERON:0007026!6.59e-07!155;UBERON:0002050!8.62e-07!605;UBERON:0005423!8.62e-07!605;UBERON:0003100!9.51e-07!41 | ||
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| ||
|short_description=p@chr5:60600512..60600563,- | |short_description=p@chr5:60600512..60600563,- | ||
}} | }} |
Latest revision as of 15:37, 30 July 2015
Short description: | p@chr5:60600512..60600563, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:60600512..60600563, - |
Coexpression cluster: | C4510_bone_mesenchymal_Small_squamous_Fibroblast_thyroid_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.04e-17 | 32 |
smooth muscle cell | 8.32e-15 | 43 |
smooth muscle myoblast | 8.32e-15 | 43 |
embryonic cell | 4.10e-13 | 250 |
muscle precursor cell | 3.63e-11 | 58 |
myoblast | 3.63e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.63e-11 | 58 |
aortic smooth muscle cell | 2.35e-10 | 10 |
muscle cell | 2.44e-10 | 55 |
fibroblast | 9.56e-09 | 76 |
squamous epithelial cell | 1.37e-08 | 63 |
electrically responsive cell | 2.16e-08 | 61 |
electrically active cell | 2.16e-08 | 61 |
mesodermal cell | 4.96e-08 | 121 |
epithelial cell | 3.25e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.83e-08 | 14 |
reproductive organ cancer | 2.26e-08 | 29 |
female reproductive organ cancer | 4.44e-08 | 27 |
squamous cell carcinoma | 2.18e-07 | 14 |