FFCP PHASE1:Hg19::chr22:43289864..43289874,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:43289864..43289874,-
|short_description=p13@PACSIN2
|description=CAGE_peak_13_at_PACSIN2_5end
|association_with_transcript=-304bp_to_ENST00000473715,ENST0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11252 | |EntrezGene=11252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |HGNC=8571 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-304bp_to_ENST00000473715,ENST00000496919_5end | |||
|cluster_id=chr22:43289864..43289874,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_PACSIN2_5end | |||
|id=chr22:43289864..43289874,- | |||
|ontology_enrichment_celltype=CL:0002057!1.19e-61!42;CL:0000860!7.15e-57!45;CL:0000766!4.71e-48!76;CL:0002009!1.94e-45!65;CL:0002194!1.48e-44!63;CL:0000576!1.48e-44!63;CL:0000040!1.48e-44!63;CL:0000559!1.48e-44!63;CL:0000557!9.50e-41!71;CL:0000839!4.06e-39!70;CL:0000738!8.68e-39!140;CL:0002087!1.32e-35!119;CL:0000763!2.47e-34!112;CL:0000049!2.47e-34!112;CL:0002031!1.14e-33!124;CL:0002032!1.70e-32!165;CL:0000837!1.70e-32!165;CL:0000037!5.17e-32!172;CL:0000566!5.17e-32!172;CL:0000988!1.79e-29!182;CL:0000094!1.04e-08!8;CL:0000134!2.70e-08!358;CL:0002320!6.81e-08!365;CL:0000771!4.89e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-64;33!CL:0002057;1.03e-64;33!CL:0000473;1.32e-46;39!CL:0000234;1.32e-46;39!CL:0000576;2.60e-32;48!CL:0000766;1.40e-22;69!CL:0000771;2.80e-17;2!CL:0000094;2.04e-16;8!CL:0000763;1.40e-14;100!CL:0000081;5.50e-12;11!CL:0000775;1.00e-11;3!CL:0002087;1.26e-07;104!CL:0000738;8.00e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.86e-55,42;CL:0002057,1.86e-55,42;CL:0000473,3.90e-48,48;CL:0000234,3.90e-48,48;CL:0000766,2.59e-47,72;CL:0002194,7.06e-38,59;CL:0000576,7.06e-38,59;CL:0000040,7.06e-38,59;CL:0000559,7.06e-38,59;CL:0002009,1.49e-36,61;CL:0000763,1.30e-33,108;CL:0000049,1.30e-33,108;CL:0000839,1.38e-33,66;CL:0000557,4.78e-33,67;CL:0000738,1.73e-23,136;CL:0002032,2.28e-21,161;CL:0000837,2.28e-21,161;CL:0000037,2.53e-20,168;CL:0000988,4.23e-19,177;CL:0002087,4.96e-18,115;CL:0000771,2.81e-17,2;CL:0002031,3.77e-17,120;CL:0000094,2.08e-16,8;CL:0000081,5.59e-12,11;CL:0000775,1.03e-11,3;CL:0000134,1.44e-07,354;CL:0002320,2.42e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-44;42!CL:0000049;1.77e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.23e-49!102;UBERON:0003061!6.23e-49!102;UBERON:0002193!1.92e-45!112;UBERON:0002371!5.02e-35!80;UBERON:0001474!7.13e-32!86;UBERON:0002405!8.79e-29!115;UBERON:0004765!1.23e-25!101;UBERON:0001434!1.23e-25!101;UBERON:0003081!2.65e-17!216;UBERON:0002204!2.41e-13!167;UBERON:0000178!8.11e-10!15;UBERON:0000179!8.11e-10!15;UBERON:0000463!8.11e-10!15;UBERON:0002384!7.41e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.26e-29,76;UBERON:0002390,2.77e-27,98;UBERON:0003061,2.77e-27,98;UBERON:0001474,1.71e-26,82;UBERON:0002193,1.85e-24,108;UBERON:0004765,7.01e-24,90;UBERON:0002405,5.15e-23,93;UBERON:0001434,3.41e-21,100;UBERON:0002204,1.99e-11,167;UBERON:0003081,2.14e-11,203;UBERON:0002384,4.93e-07,371 | |||
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| ||
|short_description=p13@PACSIN2 | |||
}} | }} |
Latest revision as of 00:55, 25 September 2015
Short description: | p13@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PACSIN2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -304bp_to_ENST00000473715, ENST00000496919_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.86e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-55 | 42 |
defensive cell | 3.90e-48 | 48 |
phagocyte | 3.90e-48 | 48 |
myeloid leukocyte | 2.59e-47 | 72 |
monopoietic cell | 7.06e-38 | 59 |
monocyte | 7.06e-38 | 59 |
monoblast | 7.06e-38 | 59 |
promonocyte | 7.06e-38 | 59 |
macrophage dendritic cell progenitor | 1.49e-36 | 61 |
myeloid cell | 1.30e-33 | 108 |
common myeloid progenitor | 1.30e-33 | 108 |
myeloid lineage restricted progenitor cell | 1.38e-33 | 66 |
granulocyte monocyte progenitor cell | 4.78e-33 | 67 |
leukocyte | 1.73e-23 | 136 |
hematopoietic oligopotent progenitor cell | 2.28e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-21 | 161 |
hematopoietic stem cell | 2.53e-20 | 168 |
hematopoietic cell | 4.23e-19 | 177 |
nongranular leukocyte | 4.96e-18 | 115 |
eosinophil | 2.81e-17 | 2 |
hematopoietic lineage restricted progenitor cell | 3.77e-17 | 120 |
granulocyte | 2.08e-16 | 8 |
blood cell | 5.59e-12 | 11 |
neutrophil | 1.03e-11 | 3 |
mesenchymal cell | 1.44e-07 | 354 |
connective tissue cell | 2.42e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.26e-29 | 76 |
hematopoietic system | 2.77e-27 | 98 |
blood island | 2.77e-27 | 98 |
bone element | 1.71e-26 | 82 |
hemolymphoid system | 1.85e-24 | 108 |
skeletal element | 7.01e-24 | 90 |
immune system | 5.15e-23 | 93 |
skeletal system | 3.41e-21 | 100 |
musculoskeletal system | 1.99e-11 | 167 |
lateral plate mesoderm | 2.14e-11 | 203 |
connective tissue | 4.93e-07 | 371 |