FFCP PHASE1:Hg19::chr12:66563296..66563307,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:66563296..66563307,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr12:66563296..66563307,+ | |description=CAGE_peak_at_chr12:66563296..66563307,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!3.68e-41!140;CL:0002087!2.92e-38!119;CL:0002031!2.04e-34!124;CL:0000037!3.87e-32!172;CL:0000566!3.87e-32!172;CL:0002057!2.19e-31!42;CL:0000988!1.51e-29!182;CL:0000860!8.59e-29!45;CL:0002032!2.38e-28!165;CL:0000837!2.38e-28!165;CL:0000766!1.55e-23!76;CL:0002009!9.58e-21!65;CL:0000557!6.82e-20!71;CL:0002194!8.61e-20!63;CL:0000576!8.61e-20!63;CL:0000040!8.61e-20!63;CL:0000559!8.61e-20!63;CL:0000839!1.39e-18!70;CL:0000624!1.09e-15!6;CL:0000838!2.05e-14!52;CL:0000763!2.12e-14!112;CL:0000049!2.12e-14!112;CL:0000542!4.86e-14!53;CL:0000051!4.86e-14!53;CL:0002393!9.40e-13!9;CL:0002397!9.40e-13!9;CL:0000791!1.26e-12!18;CL:0000789!1.26e-12!18;CL:0002420!1.26e-12!18;CL:0002419!1.26e-12!18;CL:0000790!1.26e-12!18;CL:0002320!9.60e-12!365;CL:0000134!1.22e-11!358;CL:0000048!1.44e-10!430;CL:0000219!1.72e-10!390;CL:0000034!2.21e-10!444;CL:0000723!3.39e-10!436;CL:0000084!4.02e-10!25;CL:0000827!4.02e-10!25;CL:0000898!6.55e-09!3;CL:0000623!1.67e-08!3;CL:0000825!1.67e-08!3;CL:0000842!7.79e-08!3;CL:0000771!9.43e-07!2 | |ontology_enrichment_celltype=CL:0000738!3.68e-41!140;CL:0002087!2.92e-38!119;CL:0002031!2.04e-34!124;CL:0000037!3.87e-32!172;CL:0000566!3.87e-32!172;CL:0002057!2.19e-31!42;CL:0000988!1.51e-29!182;CL:0000860!8.59e-29!45;CL:0002032!2.38e-28!165;CL:0000837!2.38e-28!165;CL:0000766!1.55e-23!76;CL:0002009!9.58e-21!65;CL:0000557!6.82e-20!71;CL:0002194!8.61e-20!63;CL:0000576!8.61e-20!63;CL:0000040!8.61e-20!63;CL:0000559!8.61e-20!63;CL:0000839!1.39e-18!70;CL:0000624!1.09e-15!6;CL:0000838!2.05e-14!52;CL:0000763!2.12e-14!112;CL:0000049!2.12e-14!112;CL:0000542!4.86e-14!53;CL:0000051!4.86e-14!53;CL:0002393!9.40e-13!9;CL:0002397!9.40e-13!9;CL:0000791!1.26e-12!18;CL:0000789!1.26e-12!18;CL:0002420!1.26e-12!18;CL:0002419!1.26e-12!18;CL:0000790!1.26e-12!18;CL:0002320!9.60e-12!365;CL:0000134!1.22e-11!358;CL:0000048!1.44e-10!430;CL:0000219!1.72e-10!390;CL:0000034!2.21e-10!444;CL:0000723!3.39e-10!436;CL:0000084!4.02e-10!25;CL:0000827!4.02e-10!25;CL:0000898!6.55e-09!3;CL:0000623!1.67e-08!3;CL:0000825!1.67e-08!3;CL:0000842!7.79e-08!3;CL:0000771!9.43e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000771;6.37e-24;2!CL:0000094;4.27e-23;8!CL:0002393;2.44e-17;6!CL:0002397;2.44e-17;6!CL:0000081;7.00e-17;11!CL:0000775;3.69e-16;3!CL:0000898;9.43e-16;3!CL:0000895;2.75e-12;1!CL:0000791;4.91e-10;18!CL:0000789;4.91e-10;18!CL:0002419;4.91e-10;18!CL:0000624;2.47e-08;6!CL:0000542;7.35e-08;53!CL:0000084;2.82e-07;25!CL:0000815;6.24e-07;2!CL:0000792;6.24e-07;2!CL:0002677;6.24e-07;2 | |ontology_enrichment_celltype_v019=CL:0000771;6.37e-24;2!CL:0000094;4.27e-23;8!CL:0002393;2.44e-17;6!CL:0002397;2.44e-17;6!CL:0000081;7.00e-17;11!CL:0000775;3.69e-16;3!CL:0000898;9.43e-16;3!CL:0000895;2.75e-12;1!CL:0000791;4.91e-10;18!CL:0000789;4.91e-10;18!CL:0002419;4.91e-10;18!CL:0000624;2.47e-08;6!CL:0000542;7.35e-08;53!CL:0000084;2.82e-07;25!CL:0000815;6.24e-07;2!CL:0000792;6.24e-07;2!CL:0002677;6.24e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000771,6.38e-24,2;CL:0000094,4.28e-23,8;CL:0000081,7.01e-17,11;CL:0000738,3.42e-16,136;CL:0000775,3.69e-16,3;CL:0000898,8.44e-16,3;CL:0002032,2.26e-13,161;CL:0000837,2.26e-13,161;CL:0000037,9.91e-13,168;CL:0000810,2.46e-12,1;CL:0000895,2.46e-12,1;CL:0002436,2.46e-12,1;CL:0002427,2.46e-12,1;CL:0002428,2.46e-12,1;CL:0002429,2.46e-12,1;CL:0002433,2.46e-12,1;CL:0002431,2.46e-12,1;CL:0002432,2.46e-12,1;CL:0000988,5.59e-12,177;CL:0002393,1.13e-11,9;CL:0002397,1.13e-11,9;CL:0000791,4.63e-10,18;CL:0000789,4.63e-10,18;CL:0002420,4.63e-10,18;CL:0002419,4.63e-10,18;CL:0000790,4.63e-10,18;CL:0002087,5.88e-10,115;CL:0000838,1.05e-09,52;CL:0000542,1.65e-09,53;CL:0000051,1.65e-09,53;CL:0002031,1.76e-09,120;CL:0000766,5.75e-09,72;CL:0000624,2.34e-08,6;CL:0000084,2.70e-07,25;CL:0000827,2.70e-07,25;CL:0000815,6.07e-07,2;CL:0000792,6.07e-07,2;CL:0002677,6.07e-07,2;CL:0000893,8.52e-07,2;CL:0002489,8.52e-07,2;CL:0000809,8.52e-07,2;CL:0000808,8.52e-07,2;CL:0000894,8.52e-07,2;CL:0000806,8.52e-07,2;CL:0000807,8.52e-07,2;CL:0000805,8.52e-07,2;CL:0002425,8.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;2.75e-12;1!CL:0000790;4.91e-10;18!CL:0000051;7.35e-08;53!CL:0002425;9.01e-07;2 | |ontology_enrichment_development_v019=CL:0002427;2.75e-12;1!CL:0000790;4.91e-10;18!CL:0000051;7.35e-08;53!CL:0002425;9.01e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-18!80;UBERON:0002390!1.70e-17!102;UBERON:0003061!1.70e-17!102;UBERON:0001474!2.16e-16!86;UBERON:0002193!3.84e-15!112;UBERON:0004765!7.41e-14!101;UBERON:0001434!7.41e-14!101;UBERON:0002405!2.05e-12!115;UBERON:0002384!5.08e-11!375;UBERON:0002204!2.28e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!3.29e-18!80;UBERON:0002390!1.70e-17!102;UBERON:0003061!1.70e-17!102;UBERON:0001474!2.16e-16!86;UBERON:0002193!3.84e-15!112;UBERON:0004765!7.41e-14!101;UBERON:0001434!7.41e-14!101;UBERON:0002405!2.05e-12!115;UBERON:0002384!5.08e-11!375;UBERON:0002204!2.28e-09!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,3.32397245119126,1.00272223735071,2.60413044859022,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0,0,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0.637812899895131,0.209658645508376,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,0,1.68152568894461,0,0.590129310341499,0.786021525498329,0.822405995998037,0,2.60737813306872,1.4203434172042,0,0,0.883817722424512,0.221533894583621,0,0.128091319725675,0,0,0,0,0.889719378972363,0.535081656179426,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.80642697289893,1.33720097891754,1.59306844271079,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.985153801009636,0.431255149719035,1.02674429023799,0,0,0,0,0,4.49404214368309,0,4.55857064779639,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.426910231213777,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,3.32397245119126,1.00272223735071,2.60413044859022,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0,0,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0.637812899895131,0.209658645508376,0.44931452458598,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,0,1.68152568894461,0,0.590129310341499,0.786021525498329,0.822405995998037,0,2.60737813306872,1.4203434172042,0,0,0.883817722424512,0.221533894583621,0,0.128091319725675,0,0,0,0,0.889719378972363,0.535081656179426,0,0,1.53288197440768,1.03088233644789,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.80642697289893,1.33720097891754,1.59306844271079,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.985153801009636,0.431255149719035,1.02674429023799,0,0,0,0,0,4.49404214368309,0,4.55857064779639,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.426910231213777,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:66563296..66563307,+ | |short_description=p@chr12:66563296..66563307,+ | ||
}} | }} |
Latest revision as of 11:31, 24 July 2015
Short description: | p@chr12:66563296..66563307, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:66563296..66563307, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data