FFCP PHASE1:Hg19::chr5:42423855..42423869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2690 | |EntrezGene=2690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4263 | |HGNC=4263 | ||
|TSSclassifier=strong | |||
|UniProt=P10912 | |UniProt=P10912 | ||
|association_with_transcript=-7bp_to_NM_000163_5end | |association_with_transcript=-7bp_to_NM_000163_5end | ||
|cluster_id=chr5:42423855..42423869,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_5_at_GHR_5end | |description=CAGE_peak_5_at_GHR_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000136!2.57e-13!15 | |ontology_enrichment_celltype=CL:0000136!2.57e-13!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.08e-33;13!CL:0002615;1.65e-13;3!CL:0002521;3.12e-07;3 | |ontology_enrichment_celltype_v019=CL:0000136;1.08e-33;13!CL:0002615;1.65e-13;3!CL:0002521;3.12e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.15e-29,15;CL:0002615,2.41e-13,3;CL:0002521,3.17e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.15e-10;31!UBERON:0006965;1.42e-09;2 | |ontology_enrichment_development_v019=UBERON:0003104;7.15e-10;31!UBERON:0006965;1.42e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-23!115;UBERON:0000475!1.54e-08!365 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-23!115;UBERON:0000475!1.54e-08!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;3.85e-10;2!UBERON:0002190;3.12e-07;3!UBERON:0003978;5.00e-07;3!UBERON:0000946;5.00e-07;3!UBERON:0003688;5.47e-07;6!UBERON:0002358;5.47e-07;6!UBERON:0003684;5.47e-07;6!UBERON:0001178;5.47e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000341;3.85e-10;2!UBERON:0002190;3.12e-07;3!UBERON:0003978;5.00e-07;3!UBERON:0000946;5.00e-07;3!UBERON:0003688;5.47e-07;6!UBERON:0002358;5.47e-07;6!UBERON:0003684;5.47e-07;6!UBERON:0001178;5.47e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.84e-10,2;UBERON:0007023,1.40e-08,114;UBERON:0002190,3.17e-07,3;UBERON:0003978,5.16e-07,3;UBERON:0009751,5.16e-07,3;UBERON:0000946,5.16e-07,3;UBERON:0002523,5.16e-07,3;UBERON:0005983,5.16e-07,3;UBERON:0002165,5.16e-07,3;UBERON:0002062,5.16e-07,3;UBERON:0007280,5.16e-07,3;UBERON:0003688,6.56e-07,6;UBERON:0002358,6.56e-07,6;UBERON:0003684,6.56e-07,6;UBERON:0001178,6.56e-07,6;UBERON:0002417,7.46e-07,60;UBERON:0000916,7.46e-07,60 | |||
|phase1_expression=0.181678379270557,1.49870366723688,1.69145284915165,1.0007329835313,1.34088328328186,0,5.06599756336621,0.631719873426831,4.96252693579693,0,0,0,0,0,0.662794751455832,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,7.86261773342101,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,6.4915837338065,0,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,6.3076346520442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0.828851746593443,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0.874599999961957,6.52499617891314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.461701551022782,0,0.23056390438806,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.59223616106011,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.821425535170343,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0.558564802544508,2.29160424011684,2.15361907373044,0.599037001496973,0,0.669514372325618,1.88113722962834,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0.670869375198532,0.394028536495991,0.314727528809989,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0.511164065356265,0.339936274560377,7.91382061861645,2.65013777824443,0.129282956361551,0.39669780522807,0,0,0.320362237703084,1.10043013569766,0,0,0,0,0,32.097050398799,15.7934633234301,29.7155209460558,41.6398241001452,0,0,0,0.1251909307065,0,0.221858103073705,0,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.92997432237433,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,1.64835494986079,0.314231179832004,0,0.913158720509496,0,0,0.500335809236594,0,0,2.43401581223611,0,0,0,0.691259661814092,0,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0,1.94228651156368,3.4905354331124,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.540219106755613,0.437119121007915,0,1.96118657403124,0,0,0.891139200981258,0.8453114551668,0,0,0.515663103788617,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0.275684698604535,0,0.378893491091197,0.267964130156178,0.829169439458779,0.103432995861895,2.13233981900981,2.14257988317366,0.0645889098360061,0.31037357147929,0,0.190941474834495,2.02117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0.502055437748735,0.99798106963804,0,0,0,0.0898252021065869,0,0.977931553462932,0.406896178315738,2.66302709674205,1.00636896795513,0.320568492303233 | |phase1_expression=0.181678379270557,1.49870366723688,1.69145284915165,1.0007329835313,1.34088328328186,0,5.06599756336621,0.631719873426831,4.96252693579693,0,0,0,0,0,0.662794751455832,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,7.86261773342101,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,6.4915837338065,0,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.844430541190656,0.329294892959902,0,0,0,0,0,6.3076346520442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0.828851746593443,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0.874599999961957,6.52499617891314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.461701551022782,0,0.23056390438806,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.59223616106011,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.821425535170343,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0.558564802544508,2.29160424011684,2.15361907373044,0.599037001496973,0,0.669514372325618,1.88113722962834,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0.670869375198532,0.394028536495991,0.314727528809989,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,0,0,0.511164065356265,0.339936274560377,7.91382061861645,2.65013777824443,0.129282956361551,0.39669780522807,0,0,0.320362237703084,1.10043013569766,0,0,0,0,0,32.097050398799,15.7934633234301,29.7155209460558,41.6398241001452,0,0,0,0.1251909307065,0,0.221858103073705,0,0.276697269872462,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,1.92997432237433,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0,0.118193840883968,0.222462803784138,1.64835494986079,0.314231179832004,0,0.913158720509496,0,0,0.500335809236594,0,0,2.43401581223611,0,0,0,0.691259661814092,0,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0,1.94228651156368,3.4905354331124,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.540219106755613,0.437119121007915,0,1.96118657403124,0,0,0.891139200981258,0.8453114551668,0,0,0.515663103788617,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.0679914901909147,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0.275684698604535,0,0.378893491091197,0.267964130156178,0.829169439458779,0.103432995861895,2.13233981900981,2.14257988317366,0.0645889098360061,0.31037357147929,0,0.190941474834495,2.02117188958219,0.217716747896961,0.684466602170562,0.0673520530145875,0.502055437748735,0.99798106963804,0,0,0,0.0898252021065869,0,0.977931553462932,0.406896178315738,2.66302709674205,1.00636896795513,0.320568492303233 | ||
|short_description=p5@GHR | |short_description=p5@GHR | ||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p5@GHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GHR_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -7bp_to_NM_000163_5end |
EntrezGene: | GHR |
HGNC: | 4263 |
UniProt: | P10912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.15e-29 | 15 |
adipocyte of omentum tissue | 2.41e-13 | 3 |
subcutaneous fat cell | 3.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 4.84e-10 | 2 |
adult organism | 1.40e-08 | 114 |
subcutaneous adipose tissue | 3.17e-07 | 3 |
valve | 5.16e-07 | 3 |
cardiac mesenchyme | 5.16e-07 | 3 |
cardial valve | 5.16e-07 | 3 |
tunica intima | 5.16e-07 | 3 |
heart layer | 5.16e-07 | 3 |
endocardium | 5.16e-07 | 3 |
endocardial cushion | 5.16e-07 | 3 |
presumptive endocardium | 5.16e-07 | 3 |
omentum | 6.56e-07 | 6 |
peritoneum | 6.56e-07 | 6 |
abdominal cavity | 6.56e-07 | 6 |
visceral peritoneum | 6.56e-07 | 6 |
abdominal segment of trunk | 7.46e-07 | 60 |
abdomen | 7.46e-07 | 60 |