FFCP PHASE1:Hg19::chr5:83588690..83588697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:83588690..83588697,- | |||
|description=CAGE_peak_at_chr5:83588690..83588697,- | |description=CAGE_peak_at_chr5:83588690..83588697,- | ||
|id=chr5:83588690..83588697,- | |id=chr5:83588690..83588697,- | ||
|ontology_enrichment_celltype=CL:0002590!1.39e-07!3 | |ontology_enrichment_celltype=CL:0002590!1.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.71e-14;3!CL:0000077;2.17e-09;19 | |ontology_enrichment_celltype_v019=CL:0000322;1.71e-14;3!CL:0000077;2.17e-09;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.60e-14,3;CL:0000077,2.17e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.31e-14;3!UBERON:0003353;1.31e-14;3 | |ontology_enrichment_development_v019=UBERON:0009847;1.31e-14;3!UBERON:0003353;1.31e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;5.15e-21;2!DOID:3908;3.10e-09;5!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |ontology_enrichment_disease_v019=DOID:3910;5.15e-21;2!DOID:3908;3.10e-09;5!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,4.66e-21,2;DOID:3908,2.97e-09,5;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.15e-21;2!UBERON:0002173;5.15e-21;2!UBERON:0002186;5.15e-21;2!UBERON:0004821;1.71e-14;3!UBERON:0007499;1.71e-14;3!UBERON:0003215;1.71e-14;3!UBERON:0010368;1.71e-14;3!UBERON:0009911;1.71e-14;3!UBERON:0002299;1.71e-14;3!UBERON:0006524;1.71e-14;3!UBERON:0008874;1.71e-14;3!UBERON:0002169;1.71e-14;3!UBERON:0004894;1.71e-14;3!UBERON:0009856;3.26e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;5.15e-21;2!UBERON:0002173;5.15e-21;2!UBERON:0002186;5.15e-21;2!UBERON:0004821;1.71e-14;3!UBERON:0007499;1.71e-14;3!UBERON:0003215;1.71e-14;3!UBERON:0010368;1.71e-14;3!UBERON:0009911;1.71e-14;3!UBERON:0002299;1.71e-14;3!UBERON:0006524;1.71e-14;3!UBERON:0008874;1.71e-14;3!UBERON:0002169;1.71e-14;3!UBERON:0004894;1.71e-14;3!UBERON:0009856;3.26e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.66e-21,2;UBERON:0002173,4.66e-21,2;UBERON:0002186,4.66e-21,2;UBERON:0004821,1.60e-14,3;UBERON:0003215,1.60e-14,3;UBERON:0010368,1.60e-14,3;UBERON:0009911,1.60e-14,3;UBERON:0002299,1.60e-14,3;UBERON:0006524,1.60e-14,3;UBERON:0008874,1.60e-14,3;UBERON:0002169,1.60e-14,3;UBERON:0004894,1.60e-14,3 | |||
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|short_description=p@chr5:83588690..83588697,- | |short_description=p@chr5:83588690..83588697,- | ||
}} | }} |
Latest revision as of 16:58, 30 July 2015
Short description: | p@chr5:83588690..83588697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:83588690..83588697, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.60e-14 | 3 |
mesothelial cell | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.66e-21 | 2 |
alveolar duct | 4.66e-21 | 2 |
bronchiole | 4.66e-21 | 2 |
pulmonary alveolus epithelium | 1.60e-14 | 3 |
alveolus | 1.60e-14 | 3 |
pulmonary lobule | 1.60e-14 | 3 |
lobule | 1.60e-14 | 3 |
alveolus of lung | 1.60e-14 | 3 |
alveolar system | 1.60e-14 | 3 |
pulmonary acinus | 1.60e-14 | 3 |
alveolar sac | 1.60e-14 | 3 |
alveolar wall | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.66e-21 | 2 |
non-small cell lung carcinoma | 2.97e-09 | 5 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |