FFCP PHASE1:Hg19::chr8:94929969..94929980,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54704 | |EntrezGene=54704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9279 | |HGNC=9279 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000517764_5end | |association_with_transcript=0bp_to_ENST00000517764_5end | ||
|cluster_id=chr8:94929969..94929980,+ | |||
|coexpression_cluster_id=C2932 | |coexpression_cluster_id=C2932 | ||
|description=CAGE_peak_8_at_PDP1_5end | |description=CAGE_peak_8_at_PDP1_5end | ||
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|ontology_enrichment_celltype=CL:0002319!3.05e-08!25;CL:0000128!8.84e-08!7;CL:0000126!8.84e-08!7;CL:0000127!8.84e-08!7;CL:0002453!8.84e-08!7;CL:0000095!4.07e-07!17;CL:0000123!4.07e-07!17;CL:0002321!4.11e-07!248;CL:0000243!4.15e-07!15;CL:0000125!4.15e-07!15;CL:0000030!4.15e-07!15;CL:0000339!4.15e-07!15 | |ontology_enrichment_celltype=CL:0002319!3.05e-08!25;CL:0000128!8.84e-08!7;CL:0000126!8.84e-08!7;CL:0000127!8.84e-08!7;CL:0002453!8.84e-08!7;CL:0000095!4.07e-07!17;CL:0000123!4.07e-07!17;CL:0002321!4.11e-07!248;CL:0000243!4.15e-07!15;CL:0000125!4.15e-07!15;CL:0000030!4.15e-07!15;CL:0000339!4.15e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000128;7.39e-18;7!CL:0000126;7.39e-18;7!CL:0000127;7.39e-18;7!CL:0000243;2.74e-12;15!CL:0000125;2.74e-12;15!CL:0002605;2.74e-11;3!CL:0000095;7.53e-11;17!CL:0002319;4.31e-09;25!CL:0000306;1.24e-08;4!CL:0002222;1.24e-08;4!CL:0002224;1.24e-08;4 | |ontology_enrichment_celltype_v019=CL:0000128;7.39e-18;7!CL:0000126;7.39e-18;7!CL:0000127;7.39e-18;7!CL:0000243;2.74e-12;15!CL:0000125;2.74e-12;15!CL:0002605;2.74e-11;3!CL:0000095;7.53e-11;17!CL:0002319;4.31e-09;25!CL:0000306;1.24e-08;4!CL:0002222;1.24e-08;4!CL:0002224;1.24e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.19e-17,7;CL:0000126,1.19e-17,7;CL:0000127,1.19e-17,7;CL:0002453,1.19e-17,7;CL:0000243,3.58e-12,15;CL:0000125,3.58e-12,15;CL:0000030,3.58e-12,15;CL:0000339,3.58e-12,15;CL:0002605,2.36e-11,3;CL:0000095,9.53e-11,17;CL:0000123,9.53e-11,17;CL:0002319,6.19e-09,25;CL:0000306,1.42e-08,4;CL:0002222,1.42e-08,4;CL:0002224,1.42e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000339;2.74e-12;15 | |ontology_enrichment_development_v019=CL:0000339;2.74e-12;15 | ||
|ontology_enrichment_disease=DOID:1749!5.01e-07!14 | |ontology_enrichment_disease=DOID:1749!5.01e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.72e-27!82;UBERON:0000955!2.39e-26!69;UBERON:0006238!2.39e-26!69;UBERON:0003075!3.61e-25!86;UBERON:0007284!3.61e-25!86;UBERON:0002616!6.16e-25!59;UBERON:0005743!7.91e-25!86;UBERON:0001049!9.07e-25!57;UBERON:0005068!9.07e-25!57;UBERON:0006241!9.07e-25!57;UBERON:0007135!9.07e-25!57;UBERON:0002346!2.08e-24!90;UBERON:0000033!1.48e-23!123;UBERON:0001869!1.49e-23!32;UBERON:0000073!5.18e-23!94;UBERON:0001016!5.18e-23!94;UBERON:0002780!5.76e-23!41;UBERON:0001890!5.76e-23!41;UBERON:0006240!5.76e-23!41;UBERON:0001893!7.03e-23!34;UBERON:0002020!3.29e-22!34;UBERON:0003528!3.29e-22!34;UBERON:0003080!4.13e-22!42;UBERON:0002791!8.00e-22!33;UBERON:0003056!2.16e-21!61;UBERON:0000153!2.54e-21!129;UBERON:0007811!2.54e-21!129;UBERON:0004121!1.14e-19!169;UBERON:0000924!1.84e-19!173;UBERON:0006601!1.84e-19!173;UBERON:0000956!4.70e-19!25;UBERON:0000203!4.70e-19!25;UBERON:0004111!1.02e-18!241;UBERON:0000025!1.11e-18!194;UBERON:0000477!5.01e-17!286;UBERON:0000483!7.35e-17!309;UBERON:0000119!9.19e-17!312;UBERON:0002619!3.88e-16!22;UBERON:0001950!9.19e-15!20;UBERON:0000475!2.81e-14!365;UBERON:0000481!1.37e-11!347;UBERON:0000064!1.62e-10!219;UBERON:0000468!1.35e-09!659;UBERON:0000922!2.81e-09!612;UBERON:0000467!7.62e-09!625;UBERON:0000480!9.46e-09!626;UBERON:0000923!2.27e-08!604;UBERON:0005291!2.27e-08!604;UBERON:0006598!2.27e-08!604;UBERON:0002532!2.27e-08!604;UBERON:0002050!2.80e-08!605;UBERON:0005423!2.80e-08!605;UBERON:0000200!6.92e-08!6;UBERON:0002049!2.22e-07!79;UBERON:0007798!2.22e-07!79 | |ontology_enrichment_uberon=UBERON:0001017!4.72e-27!82;UBERON:0000955!2.39e-26!69;UBERON:0006238!2.39e-26!69;UBERON:0003075!3.61e-25!86;UBERON:0007284!3.61e-25!86;UBERON:0002616!6.16e-25!59;UBERON:0005743!7.91e-25!86;UBERON:0001049!9.07e-25!57;UBERON:0005068!9.07e-25!57;UBERON:0006241!9.07e-25!57;UBERON:0007135!9.07e-25!57;UBERON:0002346!2.08e-24!90;UBERON:0000033!1.48e-23!123;UBERON:0001869!1.49e-23!32;UBERON:0000073!5.18e-23!94;UBERON:0001016!5.18e-23!94;UBERON:0002780!5.76e-23!41;UBERON:0001890!5.76e-23!41;UBERON:0006240!5.76e-23!41;UBERON:0001893!7.03e-23!34;UBERON:0002020!3.29e-22!34;UBERON:0003528!3.29e-22!34;UBERON:0003080!4.13e-22!42;UBERON:0002791!8.00e-22!33;UBERON:0003056!2.16e-21!61;UBERON:0000153!2.54e-21!129;UBERON:0007811!2.54e-21!129;UBERON:0004121!1.14e-19!169;UBERON:0000924!1.84e-19!173;UBERON:0006601!1.84e-19!173;UBERON:0000956!4.70e-19!25;UBERON:0000203!4.70e-19!25;UBERON:0004111!1.02e-18!241;UBERON:0000025!1.11e-18!194;UBERON:0000477!5.01e-17!286;UBERON:0000483!7.35e-17!309;UBERON:0000119!9.19e-17!312;UBERON:0002619!3.88e-16!22;UBERON:0001950!9.19e-15!20;UBERON:0000475!2.81e-14!365;UBERON:0000481!1.37e-11!347;UBERON:0000064!1.62e-10!219;UBERON:0000468!1.35e-09!659;UBERON:0000922!2.81e-09!612;UBERON:0000467!7.62e-09!625;UBERON:0000480!9.46e-09!626;UBERON:0000923!2.27e-08!604;UBERON:0005291!2.27e-08!604;UBERON:0006598!2.27e-08!604;UBERON:0002532!2.27e-08!604;UBERON:0002050!2.80e-08!605;UBERON:0005423!2.80e-08!605;UBERON:0000200!6.92e-08!6;UBERON:0002049!2.22e-07!79;UBERON:0007798!2.22e-07!79 | ||
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| ||
|short_description=p8@PDP1 | |short_description=p8@PDP1 | ||
}} | }} |
Latest revision as of 12:41, 19 September 2015
Short description: | p8@PDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PDP1_5end |
Coexpression cluster: | C2932_occipital_astrocytoma_gall_medial_postcentral_parietal_brain |
Association with transcript: | 0bp_to_ENST00000517764_5end |
EntrezGene: | PDP1 |
HGNC: | 9279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.19e-17 | 7 |
macroglial cell | 1.19e-17 | 7 |
astrocyte | 1.19e-17 | 7 |
oligodendrocyte precursor cell | 1.19e-17 | 7 |
glial cell (sensu Vertebrata) | 3.58e-12 | 15 |
glial cell | 3.58e-12 | 15 |
glioblast | 3.58e-12 | 15 |
glioblast (sensu Vertebrata) | 3.58e-12 | 15 |
astrocyte of the cerebral cortex | 2.36e-11 | 3 |
neuron associated cell | 9.53e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 9.53e-11 | 17 |
neural cell | 6.19e-09 | 25 |
crystallin accumulating cell | 1.42e-08 | 4 |
vertebrate lens cell | 1.42e-08 | 4 |
lens epithelial cell | 1.42e-08 | 4 |