FFCP PHASE1:Hg19::chr9:84430437..84430439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:84430437..84430439,+ | |||
|description=CAGE_peak_at_chr9:84430437..84430439,+ | |description=CAGE_peak_at_chr9:84430437..84430439,+ | ||
|id=chr9:84430437..84430439,+ | |id=chr9:84430437..84430439,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.32e-10!254;CL:0002076!9.73e-08!43;CL:0000076!3.15e-07!62;CL:0002202!6.01e-07!9;CL:0002632!6.01e-07!9 | |ontology_enrichment_celltype=CL:0000066!1.32e-10!254;CL:0002076!9.73e-08!43;CL:0000076!3.15e-07!62;CL:0002202!6.01e-07!9;CL:0002632!6.01e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002202;4.52e-09;9!CL:0002632;4.52e-09;9!CL:0000307;1.81e-07;3!CL:0000322;2.55e-07;3!CL:0000623;2.55e-07;3 | |ontology_enrichment_celltype_v019=CL:0002202;4.52e-09;9!CL:0002632;4.52e-09;9!CL:0000307;1.81e-07;3!CL:0000322;2.55e-07;3!CL:0000623;2.55e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002202,5.42e-09,9;CL:0002632,5.42e-09,9;CL:0000068,1.82e-07,3;CL:0000069,1.82e-07,3;CL:0000307,1.82e-07,3;CL:0000377,1.82e-07,3;CL:0000623,2.79e-07,3;CL:0000825,2.79e-07,3;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.81e-07;3 | |ontology_enrichment_development_v019=CL:0000377;1.81e-07;3 | ||
|ontology_enrichment_disease=DOID:1749!1.19e-09!14;DOID:162!5.48e-09!235;DOID:14566!1.72e-08!239;DOID:0050687!2.10e-08!143;DOID:305!1.67e-07!106 | |ontology_enrichment_disease=DOID:1749!1.19e-09!14;DOID:162!5.48e-09!235;DOID:14566!1.72e-08!239;DOID:0050687!2.10e-08!143;DOID:305!1.67e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:2355;2.47e-19;1!DOID:74;2.37e-10;2!DOID:3910;2.37e-10;2 | |ontology_enrichment_disease_v019=DOID:2355;2.47e-19;1!DOID:74;2.37e-10;2!DOID:3910;2.37e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,2.71e-19,1;DOID:74,2.49e-10,2;DOID:3910,3.58e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.47e-19;1!UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000029;2.47e-19;1!UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.56e-19,1;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0000076,5.80e-10,8;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0.596287222100115,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,0.265059536642971,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0,0,1.44331342025273,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0.435296032902013,0,0,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,1.48849806543585,0.395223263795889,0,1.91502377331055,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,0.49131575253029,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.590969204419841,0.667388411352415,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0.647428837187895,0.205325613712494,0,0,0.935757853848423,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,1.41157948686277,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.546327859818478,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0.596287222100115,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0.121973706129595,0.265059536642971,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0,0.0925884451585296,0,0,1.44331342025273,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0.435296032902013,0,0,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,1.48849806543585,0.395223263795889,0,1.91502377331055,0,0.2506898940227,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.366857197043358,0.577628330751691,0,0,0,0,0,0,0,0.49131575253029,0.295712172434091,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.590969204419841,0.667388411352415,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0.647428837187895,0.205325613712494,0,0,0.935757853848423,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,1.41157948686277,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.546327859818478,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:84430437..84430439,+ | |short_description=p@chr9:84430437..84430439,+ | ||
}} | }} |
Latest revision as of 02:55, 1 August 2015
Short description: | p@chr9:84430437..84430439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:84430437..84430439, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 5.42e-09 | 9 |
epithelial cell of lower respiratory tract | 5.42e-09 | 9 |
duct epithelial cell | 1.82e-07 | 3 |
branched duct epithelial cell | 1.82e-07 | 3 |
tracheal epithelial cell | 1.82e-07 | 3 |
tracheoblast | 1.82e-07 | 3 |
natural killer cell | 2.79e-07 | 3 |
pro-NK cell | 2.79e-07 | 3 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.56e-19 | 1 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
external ectoderm | 5.80e-10 | 8 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.71e-19 | 1 |
hematopoietic system disease | 2.49e-10 | 2 |
lung adenocarcinoma | 3.58e-10 | 2 |