FFCP PHASE1:Hg19::chr17:6658755..6658782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54739 | |EntrezGene=54739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30932 | |HGNC=30932 | ||
|TSSclassifier=strong | |||
|UniProt=Q6GPH4 | |UniProt=Q6GPH4 | ||
|association_with_transcript=-11bp_to_uc010clr.1_5end | |association_with_transcript=-11bp_to_uc010clr.1_5end | ||
|cluster_id=chr17:6658755..6658782,+ | |||
|description=CAGE_peak_2_at_XAF1_5end | |description=CAGE_peak_2_at_XAF1_5end | ||
|id=chr17:6658755..6658782,+ | |id=chr17:6658755..6658782,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.47e-21!75;CL:0000055!2.54e-13!180;CL:0002620!1.78e-10!23;CL:0002334!3.42e-08!12 | |ontology_enrichment_celltype=CL:0000057!4.47e-21!75;CL:0000055!2.54e-13!180;CL:0002620!1.78e-10!23;CL:0002334!3.42e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.05e-12;12!CL:0000134;2.39e-09;55!CL:0000048;2.36e-08;58!CL:0002620;2.59e-07;23!CL:1000306;3.23e-07;4!CL:0002547;3.23e-07;4!CL:0000723;5.09e-07;61 | |ontology_enrichment_celltype_v019=CL:0002334;4.05e-12;12!CL:0000134;2.39e-09;55!CL:0000048;2.36e-08;58!CL:0002620;2.59e-07;23!CL:1000306;3.23e-07;4!CL:0002547;3.23e-07;4!CL:0000723;5.09e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-18,76;CL:0002334,9.37e-12,12;CL:0002620,1.83e-07,23;CL:1000306,3.78e-07,4;CL:0002547,3.78e-07,4;CL:0000048,6.07e-07,427 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!8.00e-09!14 | |ontology_enrichment_disease=DOID:2394!8.00e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.61e-14;14!DOID:17;1.38e-07;5!DOID:450;1.38e-07;5!DOID:66;1.38e-07;5!DOID:423;1.38e-07;5!DOID:0080000;1.38e-07;5!DOID:11722;1.38e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;1.61e-14;14!DOID:17;1.38e-07;5!DOID:450;1.38e-07;5!DOID:66;1.38e-07;5!DOID:423;1.38e-07;5!DOID:0080000;1.38e-07;5!DOID:11722;1.38e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.00e-14,14;DOID:17,8.60e-08,5;DOID:450,8.60e-08,5;DOID:66,8.60e-08,5;DOID:423,8.60e-08,5;DOID:0080000,8.60e-08,5;DOID:11722,8.60e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.49e-15!115;UBERON:0000475!1.90e-09!365;UBERON:0000914!3.98e-08!83;UBERON:0002329!3.98e-08!83;UBERON:0003077!3.98e-08!83;UBERON:0003059!3.98e-08!83;UBERON:0007282!3.98e-08!83;UBERON:0009618!3.98e-08!83;UBERON:0007285!3.98e-08!83;UBERON:0003102!4.71e-08!95;UBERON:0002199!5.76e-08!45;UBERON:0002416!5.76e-08!45;UBERON:0007100!6.97e-08!27;UBERON:0002097!1.06e-07!40;UBERON:0000468!2.29e-07!659;UBERON:0000062!3.86e-07!511;UBERON:0004290!4.97e-07!70;UBERON:0000948!6.41e-07!24;UBERON:0005498!6.41e-07!24;UBERON:0004140!6.41e-07!24;UBERON:0009881!6.41e-07!24;UBERON:0004141!6.41e-07!24;UBERON:0003084!6.41e-07!24;UBERON:0007005!6.41e-07!24;UBERON:0004139!6.41e-07!24;UBERON:0004291!6.41e-07!24 | |ontology_enrichment_uberon=UBERON:0007023!7.49e-15!115;UBERON:0000475!1.90e-09!365;UBERON:0000914!3.98e-08!83;UBERON:0002329!3.98e-08!83;UBERON:0003077!3.98e-08!83;UBERON:0003059!3.98e-08!83;UBERON:0007282!3.98e-08!83;UBERON:0009618!3.98e-08!83;UBERON:0007285!3.98e-08!83;UBERON:0003102!4.71e-08!95;UBERON:0002199!5.76e-08!45;UBERON:0002416!5.76e-08!45;UBERON:0007100!6.97e-08!27;UBERON:0002097!1.06e-07!40;UBERON:0000468!2.29e-07!659;UBERON:0000062!3.86e-07!511;UBERON:0004290!4.97e-07!70;UBERON:0000948!6.41e-07!24;UBERON:0005498!6.41e-07!24;UBERON:0004140!6.41e-07!24;UBERON:0009881!6.41e-07!24;UBERON:0004141!6.41e-07!24;UBERON:0003084!6.41e-07!24;UBERON:0007005!6.41e-07!24;UBERON:0004139!6.41e-07!24;UBERON:0004291!6.41e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.80e-09;13!UBERON:0004797;3.23e-07;4!UBERON:0000415;3.23e-07;4!UBERON:0007240;3.23e-07;4!UBERON:0005742;3.23e-07;4!UBERON:0005734;3.23e-07;4!UBERON:0004664;3.23e-07;4!UBERON:0004663;3.23e-07;4!UBERON:0002118;3.47e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000992;1.80e-09;13!UBERON:0004797;3.23e-07;4!UBERON:0000415;3.23e-07;4!UBERON:0007240;3.23e-07;4!UBERON:0005742;3.23e-07;4!UBERON:0005734;3.23e-07;4!UBERON:0004664;3.23e-07;4!UBERON:0004663;3.23e-07;4!UBERON:0002118;3.47e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,6.29e-11,7;UBERON:0000992,2.50e-09,13;UBERON:0005156,3.24e-08,59;UBERON:0000990,3.24e-08,59;UBERON:0004458,1.74e-07,49;UBERON:0000415,3.78e-07,4;UBERON:0007240,3.78e-07,4;UBERON:0005742,3.78e-07,4;UBERON:0005734,3.78e-07,4;UBERON:0004664,3.78e-07,4;UBERON:0004663,3.78e-07,4;UBERON:0002118,5.04e-07,5;UBERON:0003134,8.70e-07,37;UBERON:0000474,8.70e-07,37 | |||
|phase1_expression=1.99846217197612,0.214100523890983,3.52386010239928,0,0.893922188854576,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.383587685530591,2.53007406669196,0,1.15877215168659,0.795285947051099,0.486634870302636,0,0,0,0.916853528483988,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,5.4666914686485,2.15271869829786,4.8991396900891,14.0549944166919,3.54668382198357,0,0,0.74000264525148,1.8672662123986,0.404132016209064,0.653847612453835,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.23486899728753,0.971237666208789,0.280901613404497,0.408308342509787,0,0.929932030581889,1.18800285728205,2.96720315134268,0,2.15585442544872,0.336672227908132,0.125118519871964,0.277064115484183,2.19488810440419,0.919463387397059,2.10333282469236,0.567160915800105,1.97328599257748,2.56268866582281,2.96704661623387,3.00091096084402,3.40073346486848,6.1833729610951,1.67505170698431,3.88185564154912,5.45647228902712,7.82544700156755,3.40584624976508,4.36444353410792,0.710019185033229,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,3.12899064659632,2.57296375277154,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,1.96565443335525,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,1.34385702559088,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,1.55126058909333,0,0,2.12750493267896,0,0,0,0,1.85871391755592,0,0,0,0.710783897485092,0,0,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.49565033836969,2.67643483195743,1.89242898040722,2.6942525448324,0.300946099727719,0,0,0.664225598535437,0,2.43274120510632,0,0,0,0,0,0,0,0,7.93944985020086,4.910783145218,1.12264037773229,4.86928767171664,3.07024349440022,1.93024705372329,1.48418066444991,1.07946785661859,1.59805552781814,1.14978018419333,1.03850885836724,0.116210378459959,0,0.200506470303285,0,2.18147451512753,0,1.44236856455367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,4.82051789532479,1.7400729292582,0,0,0,0.322260734604821,0,0.255679882248303,1.06838442776085,0,0,0,0,0.929691098594572,9.12955805808856,0,8.62494024493049,0,1.73986598415015,0.37064843820784,1.5743737541619,0.372158369359667,0.949138274156178,0.38126038784765,0.255897791311334,0.855877976067841,0,3.13979456079692,1.07923474549989,0.823611089208164,0.589062011728432,0.404364963146632,0,0.842516912477962,0,5.60541026151954,0,2.18399858252777,2.96951407102797,0,0,1.32687795048244,3.06915619677634,0,0,0.202910376962704,0,0,0,0.491245205065606,0,1.06428319221179,1.68886108238131,2.63435914367922,0,0.349934720244983,0,0.670302275535787,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,1.65770349318689,0,0,0,0.933118762985422,0,0,0,1.28236427328014,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0,0,0,0,0,0.173624994933292,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0.438770794307945,0,0,3.38581137416707,0,0,0,0,1.5950057986596,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.14994833854341,1.22206028986725,0,0,0,0.404406797884062,3.21031058919516,0,0,0,0,0.394584402849391,3.62972148145992,0.30607276163049,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0.171986032471617,0,0,0,1.16386819786103,0,0.677942222341597,0,0,0.316553979779393,0.195551382734803,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0.410716136675979,0,0.429765441419957,0,3.6306712165393,2.52076466412852,2.87149209830726,0.599037001496973,1.71690419254628,0.223171457441873,0.873385142327441,3.60299883542404,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.419636705079985,0,0,0,1.42939065274673,0.662091970365432,0,2.71499800876856,0,0.979762080328227,0,0.082092520749339,0,0.113312091520126,0,0,1.16354660725395,0.39669780522807,0,0,1.17466153824464,5.34494637338864,1.65695622138878,0,0,0,0.638341257770182,0,1.2534494701135,0.306345576763462,0.327872630709804,0,0,0.488105059607853,0.500763722825999,0.573409195690071,0.110929051536852,0.372578417648301,0,0,0,0,0.470531639396343,0,0,1.94031243752936,7.01139929541673,1.66441758450784,0.189403005275089,0.251567901752575,5.33886732957922,2.74608082076308,2.26846385644859,1.39893480524502,1.03498604992744,1.11507737014592,2.6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| ||
|short_description=p2@XAF1 | |short_description=p2@XAF1 | ||
}} | }} |
Latest revision as of 00:20, 17 September 2015
Short description: | p2@XAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_uc010clr.1_5end |
EntrezGene: | XAF1 |
HGNC: | 30932 |
UniProt: | Q6GPH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-18 | 76 |
preadipocyte | 9.37e-12 | 12 |
skin fibroblast | 1.83e-07 | 23 |
fibroblast of tunica adventitia of artery | 3.78e-07 | 4 |
fibroblast of the aortic adventitia | 3.78e-07 | 4 |
multi fate stem cell | 6.07e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 6.29e-11 | 7 |
female gonad | 2.50e-09 | 13 |
reproductive structure | 3.24e-08 | 59 |
reproductive system | 3.24e-08 | 59 |
body cavity or lining | 1.74e-07 | 49 |
artery wall | 3.78e-07 | 4 |
tunica adventitia of artery | 3.78e-07 | 4 |
adventitia | 3.78e-07 | 4 |
tunica adventitia of blood vessel | 3.78e-07 | 4 |
aorta tunica adventitia | 3.78e-07 | 4 |
aorta wall | 3.78e-07 | 4 |
right ovary | 5.04e-07 | 5 |
female reproductive organ | 8.70e-07 | 37 |
female reproductive system | 8.70e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.00e-14 | 14 |
musculoskeletal system disease | 8.60e-08 | 5 |
myotonic disease | 8.60e-08 | 5 |
muscle tissue disease | 8.60e-08 | 5 |
myopathy | 8.60e-08 | 5 |
muscular disease | 8.60e-08 | 5 |
myotonic dystrophy | 8.60e-08 | 5 |