FFCP PHASE1:Hg19::chr9:21591753..21591793,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:21591753..21591793,- | |||
|coexpression_cluster_id=C4813 | |coexpression_cluster_id=C4813 | ||
|description=CAGE_peak_at_chr9:21591753..21591793,- | |description=CAGE_peak_at_chr9:21591753..21591793,- | ||
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|ontology_enrichment_celltype=CL:0000548!2.78e-17!679;CL:0000004!2.78e-17!679;CL:0000255!2.78e-17!679;CL:0000012!8.16e-17!682;CL:0000220!6.59e-14!246;CL:0002321!1.67e-13!248;CL:0000055!1.30e-12!180;CL:0000066!1.40e-12!254;CL:0000003!9.53e-12!722;CL:0002371!2.01e-10!591;CL:0000680!7.19e-10!57;CL:0000056!7.19e-10!57;CL:0000355!7.19e-10!57;CL:0000144!2.36e-09!625;CL:0000359!6.19e-09!32;CL:0002076!7.58e-09!43;CL:0000187!9.27e-09!54;CL:0002368!1.30e-08!13;CL:0000183!5.31e-08!59;CL:0000192!2.26e-07!42;CL:0000514!2.26e-07!42;CL:0000393!3.27e-07!60;CL:0000211!3.27e-07!60;CL:0000063!3.38e-07!578;CL:0002620!8.22e-07!23 | |ontology_enrichment_celltype=CL:0000548!2.78e-17!679;CL:0000004!2.78e-17!679;CL:0000255!2.78e-17!679;CL:0000012!8.16e-17!682;CL:0000220!6.59e-14!246;CL:0002321!1.67e-13!248;CL:0000055!1.30e-12!180;CL:0000066!1.40e-12!254;CL:0000003!9.53e-12!722;CL:0002371!2.01e-10!591;CL:0000680!7.19e-10!57;CL:0000056!7.19e-10!57;CL:0000355!7.19e-10!57;CL:0000144!2.36e-09!625;CL:0000359!6.19e-09!32;CL:0002076!7.58e-09!43;CL:0000187!9.27e-09!54;CL:0002368!1.30e-08!13;CL:0000183!5.31e-08!59;CL:0000192!2.26e-07!42;CL:0000514!2.26e-07!42;CL:0000393!3.27e-07!60;CL:0000211!3.27e-07!60;CL:0000063!3.38e-07!578;CL:0002620!8.22e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.44e-09;13!CL:0002076;1.72e-08;42!CL:0000244;1.01e-07;4!CL:0000731;1.01e-07;4 | |ontology_enrichment_celltype_v019=CL:0002368;3.44e-09;13!CL:0002076;1.72e-08;42!CL:0000244;1.01e-07;4!CL:0000731;1.01e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,7.39e-11,42;CL:0002368,2.90e-09,13;CL:0000066,3.85e-08,253;CL:0000244,9.06e-08,4;CL:0000731,9.06e-08,4;CL:0002321,2.28e-07,250;CL:0000223,3.56e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:193!1.07e-08!29;DOID:120!2.97e-08!27;DOID:2394!1.03e-07!14 | |ontology_enrichment_disease=DOID:193!1.07e-08!29;DOID:120!2.97e-08!27;DOID:2394!1.03e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:120;1.05e-09;27!DOID:193;9.66e-09;29!DOID:2394;1.77e-08;14 | |ontology_enrichment_disease_v019=DOID:120;1.05e-09;27!DOID:193;9.66e-09;29!DOID:2394;1.77e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:120,1.30e-09,27;DOID:193,1.17e-08,29;DOID:2394,3.24e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!9.71e-13!82;UBERON:0001637!4.12e-11!42;UBERON:0003509!4.12e-11!42;UBERON:0004572!4.12e-11!42;UBERON:0004573!6.58e-10!33;UBERON:0004571!6.58e-10!33;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0001981!2.68e-09!60;UBERON:0007500!2.68e-09!60;UBERON:0004537!2.68e-09!60;UBERON:0006965!2.68e-09!60;UBERON:0004290!3.12e-09!70;UBERON:0002049!3.83e-09!79;UBERON:0007798!3.83e-09!79;UBERON:0000055!9.99e-09!69;UBERON:0001134!2.06e-08!61;UBERON:0002036!2.06e-08!61;UBERON:0003082!2.06e-08!61;UBERON:0000467!2.10e-08!625;UBERON:0000490!2.33e-08!138;UBERON:0000480!2.73e-08!626;UBERON:0000483!7.61e-08!309;UBERON:0002385!9.06e-08!63;UBERON:0001015!9.06e-08!63;UBERON:0000383!9.06e-08!63;UBERON:0000947!9.82e-08!21;UBERON:0010191!9.82e-08!21;UBERON:0004872!1.10e-07!84;UBERON:0000119!1.81e-07!312;UBERON:0000468!7.27e-07!659;UBERON:0004535!8.83e-07!110 | |ontology_enrichment_uberon=UBERON:0000486!9.71e-13!82;UBERON:0001637!4.12e-11!42;UBERON:0003509!4.12e-11!42;UBERON:0004572!4.12e-11!42;UBERON:0004573!6.58e-10!33;UBERON:0004571!6.58e-10!33;UBERON:0000914!1.47e-09!83;UBERON:0002329!1.47e-09!83;UBERON:0003077!1.47e-09!83;UBERON:0003059!1.47e-09!83;UBERON:0007282!1.47e-09!83;UBERON:0009618!1.47e-09!83;UBERON:0007285!1.47e-09!83;UBERON:0001981!2.68e-09!60;UBERON:0007500!2.68e-09!60;UBERON:0004537!2.68e-09!60;UBERON:0006965!2.68e-09!60;UBERON:0004290!3.12e-09!70;UBERON:0002049!3.83e-09!79;UBERON:0007798!3.83e-09!79;UBERON:0000055!9.99e-09!69;UBERON:0001134!2.06e-08!61;UBERON:0002036!2.06e-08!61;UBERON:0003082!2.06e-08!61;UBERON:0000467!2.10e-08!625;UBERON:0000490!2.33e-08!138;UBERON:0000480!2.73e-08!626;UBERON:0000483!7.61e-08!309;UBERON:0002385!9.06e-08!63;UBERON:0001015!9.06e-08!63;UBERON:0000383!9.06e-08!63;UBERON:0000947!9.82e-08!21;UBERON:0010191!9.82e-08!21;UBERON:0004872!1.10e-07!84;UBERON:0000119!1.81e-07!312;UBERON:0000468!7.27e-07!659;UBERON:0004535!8.83e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.43e-09;5!UBERON:0003134;3.70e-08;33!UBERON:0005910;1.61e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.43e-09;5!UBERON:0003134;3.70e-08;33!UBERON:0005910;1.61e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.16e-09,5;UBERON:0003100,8.22e-08,41;UBERON:0005910,1.50e-07,6;UBERON:0003134,3.26e-07,37;UBERON:0000474,3.26e-07,37;UBERON:0001637,4.61e-07,42;UBERON:0003509,4.61e-07,42;UBERON:0004572,4.61e-07,42 | |||
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| ||
|short_description=p@chr9:21591753..21591793,- | |short_description=p@chr9:21591753..21591793,- | ||
}} | }} |
Latest revision as of 01:08, 1 August 2015
Short description: | p@chr9:21591753..21591793, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:21591753..21591793, - |
Coexpression cluster: | C4813_Urothelial_Bronchial_Small_Prostate_Fibroblast_tubular_lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 7.39e-11 | 42 |
respiratory epithelial cell | 2.90e-09 | 13 |
epithelial cell | 3.85e-08 | 253 |
transitional epithelial cell | 9.06e-08 | 4 |
urothelial cell | 9.06e-08 | 4 |
embryonic cell | 2.28e-07 | 250 |
endodermal cell | 3.56e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.16e-09 | 5 |
female organism | 8.22e-08 | 41 |
transitional epithelium | 1.50e-07 | 6 |
female reproductive organ | 3.26e-07 | 37 |
female reproductive system | 3.26e-07 | 37 |
artery | 4.61e-07 | 42 |
arterial blood vessel | 4.61e-07 | 42 |
arterial system | 4.61e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.30e-09 | 27 |
reproductive organ cancer | 1.17e-08 | 29 |
ovarian cancer | 3.24e-08 | 14 |