FFCP PHASE1:Hg19::chr10:20568710..20568737,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:20568710..20568737,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr10:20568710..20568737,+ | |description=CAGE_peak_at_chr10:20568710..20568737,+ | ||
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|ontology_enrichment_celltype=CL:0002194!7.39e-19!63;CL:0000576!7.39e-19!63;CL:0000040!7.39e-19!63;CL:0000559!7.39e-19!63;CL:0002009!1.59e-18!65;CL:0000766!4.67e-17!76;CL:0000557!4.33e-16!71;CL:0000839!7.69e-16!70;CL:0002057!9.90e-16!42;CL:0000860!8.58e-14!45;CL:0000763!8.07e-09!112;CL:0000049!8.07e-09!112 | |ontology_enrichment_celltype=CL:0002194!7.39e-19!63;CL:0000576!7.39e-19!63;CL:0000040!7.39e-19!63;CL:0000559!7.39e-19!63;CL:0002009!1.59e-18!65;CL:0000766!4.67e-17!76;CL:0000557!4.33e-16!71;CL:0000839!7.69e-16!70;CL:0002057!9.90e-16!42;CL:0000860!8.58e-14!45;CL:0000763!8.07e-09!112;CL:0000049!8.07e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.62e-19;6!CL:0000473;2.48e-11;39!CL:0000234;2.48e-11;39!CL:0002615;7.40e-11;3 | |ontology_enrichment_celltype_v019=CL:0000235;2.62e-19;6!CL:0000473;2.48e-11;39!CL:0000234;2.48e-11;39!CL:0002615;7.40e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.66e-19,6;CL:0002194,4.89e-16,59;CL:0000576,4.89e-16,59;CL:0000040,4.89e-16,59;CL:0000559,4.89e-16,59;CL:0000766,1.46e-15,72;CL:0002009,2.35e-15,61;CL:0000473,3.84e-15,48;CL:0000234,3.84e-15,48;CL:0000839,7.84e-14,66;CL:0000557,1.48e-13,67;CL:0002615,1.27e-10,3;CL:0000763,1.23e-08,108;CL:0000049,1.23e-08,108;CL:0000860,6.41e-07,42;CL:0002057,6.41e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-12!115;UBERON:0002371!2.59e-12!80;UBERON:0001474!9.14e-11!86;UBERON:0002346!3.66e-10!90;UBERON:0002390!6.21e-10!102;UBERON:0003061!6.21e-10!102;UBERON:0001049!2.63e-09!57;UBERON:0005068!2.63e-09!57;UBERON:0006241!2.63e-09!57;UBERON:0007135!2.63e-09!57;UBERON:0003075!4.98e-09!86;UBERON:0007284!4.98e-09!86;UBERON:0002405!1.21e-08!115;UBERON:0002193!1.64e-08!112;UBERON:0004765!2.50e-08!101;UBERON:0001434!2.50e-08!101;UBERON:0002780!3.69e-08!41;UBERON:0001890!3.69e-08!41;UBERON:0006240!3.69e-08!41;UBERON:0003080!9.27e-08!42;UBERON:0002020!2.92e-07!34;UBERON:0003528!2.92e-07!34;UBERON:0002616!3.38e-07!59;UBERON:0001893!6.86e-07!34;UBERON:0005743!7.71e-07!86;UBERON:0003056!8.49e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.83e-12!115;UBERON:0002371!2.59e-12!80;UBERON:0001474!9.14e-11!86;UBERON:0002346!3.66e-10!90;UBERON:0002390!6.21e-10!102;UBERON:0003061!6.21e-10!102;UBERON:0001049!2.63e-09!57;UBERON:0005068!2.63e-09!57;UBERON:0006241!2.63e-09!57;UBERON:0007135!2.63e-09!57;UBERON:0003075!4.98e-09!86;UBERON:0007284!4.98e-09!86;UBERON:0002405!1.21e-08!115;UBERON:0002193!1.64e-08!112;UBERON:0004765!2.50e-08!101;UBERON:0001434!2.50e-08!101;UBERON:0002780!3.69e-08!41;UBERON:0001890!3.69e-08!41;UBERON:0006240!3.69e-08!41;UBERON:0003080!9.27e-08!42;UBERON:0002020!2.92e-07!34;UBERON:0003528!2.92e-07!34;UBERON:0002616!3.38e-07!59;UBERON:0001893!6.86e-07!34;UBERON:0005743!7.71e-07!86;UBERON:0003056!8.49e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.83e-14;6!UBERON:0002358;7.83e-14;6!UBERON:0003684;7.83e-14;6!UBERON:0001178;7.83e-14;6!UBERON:0004457;4.33e-09;9!UBERON:0000042;4.33e-09;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;7.83e-14;6!UBERON:0002358;7.83e-14;6!UBERON:0003684;7.83e-14;6!UBERON:0001178;7.83e-14;6!UBERON:0004457;4.33e-09;9!UBERON:0000042;4.33e-09;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.45e-13,6;UBERON:0002358,2.45e-13,6;UBERON:0003684,2.45e-13,6;UBERON:0001178,2.45e-13,6;UBERON:0002371,2.15e-11,76;UBERON:0001474,3.20e-10,82;UBERON:0004765,6.60e-09,90;UBERON:0002390,9.27e-09,98;UBERON:0003061,9.27e-09,98;UBERON:0002405,1.79e-08,93;UBERON:0001434,1.43e-07,100;UBERON:0002193,1.63e-07,108 | |||
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| ||
|short_description=p@chr10:20568710..20568737,+ | |short_description=p@chr10:20568710..20568737,+ | ||
}} | }} |
Latest revision as of 12:29, 23 July 2015
Short description: | p@chr10:20568710..20568737, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:20568710..20568737, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.66e-19 | 6 |
monopoietic cell | 4.89e-16 | 59 |
monocyte | 4.89e-16 | 59 |
monoblast | 4.89e-16 | 59 |
promonocyte | 4.89e-16 | 59 |
myeloid leukocyte | 1.46e-15 | 72 |
macrophage dendritic cell progenitor | 2.35e-15 | 61 |
defensive cell | 3.84e-15 | 48 |
phagocyte | 3.84e-15 | 48 |
myeloid lineage restricted progenitor cell | 7.84e-14 | 66 |
granulocyte monocyte progenitor cell | 1.48e-13 | 67 |
adipocyte of omentum tissue | 1.27e-10 | 3 |
myeloid cell | 1.23e-08 | 108 |
common myeloid progenitor | 1.23e-08 | 108 |
classical monocyte | 6.41e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.41e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.45e-13 | 6 |
peritoneum | 2.45e-13 | 6 |
abdominal cavity | 2.45e-13 | 6 |
visceral peritoneum | 2.45e-13 | 6 |
bone marrow | 2.15e-11 | 76 |
bone element | 3.20e-10 | 82 |
skeletal element | 6.60e-09 | 90 |
hematopoietic system | 9.27e-09 | 98 |
blood island | 9.27e-09 | 98 |
immune system | 1.79e-08 | 93 |
skeletal system | 1.43e-07 | 100 |
hemolymphoid system | 1.63e-07 | 108 |