FFCP PHASE1:Hg19::chr9:124262117..124262140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4253 | |HGNC=4253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000373793_5end | |association_with_transcript=-22bp_to_ENST00000373793_5end | ||
|cluster_id=chr9:124262117..124262140,- | |||
|coexpression_cluster_id=C4796 | |coexpression_cluster_id=C4796 | ||
|description=CAGE_peak_2_at_GGTA1P_5end | |description=CAGE_peak_2_at_GGTA1P_5end | ||
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|ontology_enrichment_celltype=CL:0000557!1.56e-28!71;CL:0000766!1.35e-27!76;CL:0002009!2.70e-27!65;CL:0002194!1.15e-25!63;CL:0000576!1.15e-25!63;CL:0000040!1.15e-25!63;CL:0000559!1.15e-25!63;CL:0000839!6.34e-25!70;CL:0002057!1.44e-23!42;CL:0000763!1.20e-22!112;CL:0000049!1.20e-22!112;CL:0000860!7.71e-21!45;CL:0000738!8.97e-18!140;CL:0000037!2.30e-15!172;CL:0000566!2.30e-15!172;CL:0002031!7.20e-14!124;CL:0002032!7.70e-14!165;CL:0000837!7.70e-14!165;CL:0000988!1.04e-13!182;CL:0002087!2.96e-13!119;CL:0000451!4.77e-07!10;CL:0000990!8.20e-07!8 | |ontology_enrichment_celltype=CL:0000557!1.56e-28!71;CL:0000766!1.35e-27!76;CL:0002009!2.70e-27!65;CL:0002194!1.15e-25!63;CL:0000576!1.15e-25!63;CL:0000040!1.15e-25!63;CL:0000559!1.15e-25!63;CL:0000839!6.34e-25!70;CL:0002057!1.44e-23!42;CL:0000763!1.20e-22!112;CL:0000049!1.20e-22!112;CL:0000860!7.71e-21!45;CL:0000738!8.97e-18!140;CL:0000037!2.30e-15!172;CL:0000566!2.30e-15!172;CL:0002031!7.20e-14!124;CL:0002032!7.70e-14!165;CL:0000837!7.70e-14!165;CL:0000988!1.04e-13!182;CL:0002087!2.96e-13!119;CL:0000451!4.77e-07!10;CL:0000990!8.20e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.11e-22;39!CL:0000234;2.11e-22;39!CL:0000860;9.83e-22;33!CL:0002057;9.83e-22;33!CL:0000576;4.37e-18;48!CL:0000766;7.65e-15;69!CL:0000763;1.10e-07;100!CL:0000235;2.55e-07;6!CL:0000990;9.60e-07;8 | |ontology_enrichment_celltype_v019=CL:0000473;2.11e-22;39!CL:0000234;2.11e-22;39!CL:0000860;9.83e-22;33!CL:0002057;9.83e-22;33!CL:0000576;4.37e-18;48!CL:0000766;7.65e-15;69!CL:0000763;1.10e-07;100!CL:0000235;2.55e-07;6!CL:0000990;9.60e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.59e-36,67;CL:0002009,1.82e-34,61;CL:0000766,4.70e-34,72;CL:0002194,1.97e-32,59;CL:0000576,1.97e-32,59;CL:0000040,1.97e-32,59;CL:0000559,1.97e-32,59;CL:0000839,8.02e-32,66;CL:0000473,8.65e-32,48;CL:0000234,8.65e-32,48;CL:0000860,4.34e-26,42;CL:0002057,4.34e-26,42;CL:0000763,4.76e-26,108;CL:0000049,4.76e-26,108;CL:0000738,4.95e-16,136;CL:0000037,5.35e-13,168;CL:0002031,1.47e-12,120;CL:0002032,1.02e-11,161;CL:0000837,1.02e-11,161;CL:0002087,1.13e-11,115;CL:0000988,1.17e-11,177;CL:0000235,2.63e-07,6;CL:0000990,8.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.95e-19;42!CL:0000049;2.62e-08;108!UBERON:0006601;7.53e-07;82 | |ontology_enrichment_development_v019=CL:0002057;6.95e-19;42!CL:0000049;2.62e-08;108!UBERON:0006601;7.53e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-57!115;UBERON:0002193!2.02e-30!112;UBERON:0002390!4.88e-30!102;UBERON:0003061!4.88e-30!102;UBERON:0002371!1.00e-23!80;UBERON:0001474!4.60e-21!86;UBERON:0002405!6.72e-20!115;UBERON:0001049!1.32e-17!57;UBERON:0005068!1.32e-17!57;UBERON:0006241!1.32e-17!57;UBERON:0007135!1.32e-17!57;UBERON:0003081!3.95e-17!216;UBERON:0004765!7.69e-16!101;UBERON:0001434!7.69e-16!101;UBERON:0003080!2.16e-15!42;UBERON:0002780!1.02e-14!41;UBERON:0001890!1.02e-14!41;UBERON:0006240!1.02e-14!41;UBERON:0002616!2.46e-13!59;UBERON:0001893!4.04e-12!34;UBERON:0002020!7.16e-12!34;UBERON:0003528!7.16e-12!34;UBERON:0003075!8.65e-12!86;UBERON:0007284!8.65e-12!86;UBERON:0002791!9.31e-12!33;UBERON:0001869!3.87e-11!32;UBERON:0002346!1.71e-10!90;UBERON:0000955!1.93e-10!69;UBERON:0006238!1.93e-10!69;UBERON:0001017!5.46e-10!82;UBERON:0005743!1.80e-09!86;UBERON:0002619!2.96e-09!22;UBERON:0001950!4.54e-08!20;UBERON:0000956!4.80e-08!25;UBERON:0000203!4.80e-08!25;UBERON:0003056!1.52e-07!61;UBERON:0000073!1.65e-07!94;UBERON:0001016!1.65e-07!94;UBERON:0000467!2.64e-07!625;UBERON:0000480!3.37e-07!626;UBERON:0000062!3.46e-07!511;UBERON:0000178!3.67e-07!15;UBERON:0000179!3.67e-07!15;UBERON:0000463!3.67e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.05e-57!115;UBERON:0002193!2.02e-30!112;UBERON:0002390!4.88e-30!102;UBERON:0003061!4.88e-30!102;UBERON:0002371!1.00e-23!80;UBERON:0001474!4.60e-21!86;UBERON:0002405!6.72e-20!115;UBERON:0001049!1.32e-17!57;UBERON:0005068!1.32e-17!57;UBERON:0006241!1.32e-17!57;UBERON:0007135!1.32e-17!57;UBERON:0003081!3.95e-17!216;UBERON:0004765!7.69e-16!101;UBERON:0001434!7.69e-16!101;UBERON:0003080!2.16e-15!42;UBERON:0002780!1.02e-14!41;UBERON:0001890!1.02e-14!41;UBERON:0006240!1.02e-14!41;UBERON:0002616!2.46e-13!59;UBERON:0001893!4.04e-12!34;UBERON:0002020!7.16e-12!34;UBERON:0003528!7.16e-12!34;UBERON:0003075!8.65e-12!86;UBERON:0007284!8.65e-12!86;UBERON:0002791!9.31e-12!33;UBERON:0001869!3.87e-11!32;UBERON:0002346!1.71e-10!90;UBERON:0000955!1.93e-10!69;UBERON:0006238!1.93e-10!69;UBERON:0001017!5.46e-10!82;UBERON:0005743!1.80e-09!86;UBERON:0002619!2.96e-09!22;UBERON:0001950!4.54e-08!20;UBERON:0000956!4.80e-08!25;UBERON:0000203!4.80e-08!25;UBERON:0003056!1.52e-07!61;UBERON:0000073!1.65e-07!94;UBERON:0001016!1.65e-07!94;UBERON:0000467!2.64e-07!625;UBERON:0000480!3.37e-07!626;UBERON:0000062!3.46e-07!511;UBERON:0000178!3.67e-07!15;UBERON:0000179!3.67e-07!15;UBERON:0000463!3.67e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.90e-17;114!UBERON:0002780;6.17e-12;41!UBERON:0001890;6.17e-12;41!UBERON:0001893;6.79e-11;34!UBERON:0002791;6.97e-11;32!UBERON:0003528;7.44e-11;34!UBERON:0002020;7.44e-11;34!UBERON:0001869;8.55e-11;32!UBERON:0002619;5.07e-10;22!UBERON:0000073;8.96e-10;53!UBERON:0002616;8.96e-10;53!UBERON:0000178;9.10e-09;15!UBERON:0000179;9.10e-09;15!UBERON:0000463;9.10e-09;15!UBERON:0001950;1.21e-08;20!UBERON:0000956;3.23e-08;25!UBERON:0000203;3.23e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.90e-17;114!UBERON:0002780;6.17e-12;41!UBERON:0001890;6.17e-12;41!UBERON:0001893;6.79e-11;34!UBERON:0002791;6.97e-11;32!UBERON:0003528;7.44e-11;34!UBERON:0002020;7.44e-11;34!UBERON:0001869;8.55e-11;32!UBERON:0002619;5.07e-10;22!UBERON:0000073;8.96e-10;53!UBERON:0002616;8.96e-10;53!UBERON:0000178;9.10e-09;15!UBERON:0000179;9.10e-09;15!UBERON:0000463;9.10e-09;15!UBERON:0001950;1.21e-08;20!UBERON:0000956;3.23e-08;25!UBERON:0000203;3.23e-08;25 | ||
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| ||
|short_description=p2@GGTA1P | |short_description=p2@GGTA1P | ||
}} | }} |
Latest revision as of 21:21, 24 September 2015
Short description: | p2@GGTA1P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GGTA1P_5end |
Coexpression cluster: | C4796_salivary_CD14_submaxillary_left_Monocytederived_Whole_Macrophage |
Association with transcript: | -22bp_to_ENST00000373793_5end |
EntrezGene: | NA |
HGNC: | 4253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.59e-36 | 67 |
macrophage dendritic cell progenitor | 1.82e-34 | 61 |
myeloid leukocyte | 4.70e-34 | 72 |
monopoietic cell | 1.97e-32 | 59 |
monocyte | 1.97e-32 | 59 |
monoblast | 1.97e-32 | 59 |
promonocyte | 1.97e-32 | 59 |
myeloid lineage restricted progenitor cell | 8.02e-32 | 66 |
defensive cell | 8.65e-32 | 48 |
phagocyte | 8.65e-32 | 48 |
classical monocyte | 4.34e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.34e-26 | 42 |
myeloid cell | 4.76e-26 | 108 |
common myeloid progenitor | 4.76e-26 | 108 |
leukocyte | 4.95e-16 | 136 |
hematopoietic stem cell | 5.35e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 1.47e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.02e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-11 | 161 |
nongranular leukocyte | 1.13e-11 | 115 |
hematopoietic cell | 1.17e-11 | 177 |
macrophage | 2.63e-07 | 6 |
conventional dendritic cell | 8.24e-07 | 8 |