FFCP PHASE1:Hg19::chr11:57405820..57405858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000530595,uc001nkt.1_5end | |association_with_transcript=0bp_to_ENST00000530595,uc001nkt.1_5end | ||
|cluster_id=chr11:57405820..57405858,+ | |||
|description=CAGE_peak_1_at_ENST00000530595_5end,CAGE_peak_1_at_uc001nkt.1_5end | |description=CAGE_peak_1_at_ENST00000530595_5end,CAGE_peak_1_at_uc001nkt.1_5end | ||
|id=chr11:57405820..57405858,+ | |id=chr11:57405820..57405858,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.66e-22!180;CL:0000057!4.21e-12!75;CL:0002321!5.18e-12!248;CL:0000220!2.75e-11!246;CL:0000133!3.90e-11!59;CL:0000221!3.15e-10!71;CL:0000222!3.59e-07!119;CL:0002620!4.37e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.66e-22!180;CL:0000057!4.21e-12!75;CL:0002321!5.18e-12!248;CL:0000220!2.75e-11!246;CL:0000133!3.90e-11!59;CL:0000221!3.15e-10!71;CL:0000222!3.59e-07!119;CL:0002620!4.37e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.81e-07;23 | |ontology_enrichment_celltype_v019=CL:0002620;6.81e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-11,76;CL:0000133,4.63e-10,59;CL:0002321,1.50e-09,250;CL:0000221,3.44e-09,72;CL:0002620,4.41e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3095!4.76e-07!22;DOID:2994!4.76e-07!22 | |ontology_enrichment_disease=DOID:3095!4.76e-07!22;DOID:2994!4.76e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.97e-07;22!DOID:2994;5.97e-07;22 | |ontology_enrichment_disease_v019=DOID:3095;5.97e-07;22!DOID:2994;5.97e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,4.35e-07,22;DOID:2994,4.35e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.58e-12!365;UBERON:0000481!1.58e-11!347;UBERON:0000119!2.13e-11!312;UBERON:0000483!7.62e-11!309;UBERON:0000924!1.78e-09!173;UBERON:0006601!1.78e-09!173;UBERON:0004121!4.20e-09!169;UBERON:0000468!2.31e-08!659;UBERON:0000477!8.50e-08!286;UBERON:0000922!9.47e-07!612 | |ontology_enrichment_uberon=UBERON:0000475!1.58e-12!365;UBERON:0000481!1.58e-11!347;UBERON:0000119!2.13e-11!312;UBERON:0000483!7.62e-11!309;UBERON:0000924!1.78e-09!173;UBERON:0006601!1.78e-09!173;UBERON:0004121!4.20e-09!169;UBERON:0000468!2.31e-08!659;UBERON:0000477!8.50e-08!286;UBERON:0000922!9.47e-07!612 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.53e-08,309;UBERON:0000483,1.06e-07,306 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,1.0007329835313,1.78784437770915,4.36169262050184,0,1.89515962028049,0,0.491467873003018,2.09340350391728,1.31064823278103,1.31883489114227,0.618831764800233,1.65698687863958,0.672325146451775,1.20538905604795,0,2.43966399395253,5.41732655537867,6.12002073732759,4.07491137921514,8.87331560106276,9.30746090495612,8.66244213204139,0,0,0,0,0,1.85779347979291,0,1.8072355126695,1.84877005083394,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,4.02420515822182,0.511450247374121,3.61439152384566,2.00535164254356,2.60723734129483,0,0.486634870302636,8.88627281342238,9.53436409089025,6.67544371267758,3.1434978119451,1.45718115317017,1.85392221392215,0,0,0,0,0,0,2.58391129576717,1.72046919021225,5.20710752411391,1.69592382577203,0.838998872419812,1.6507082516404,1.8809546988313,1.03366703667732,1.77883131343355,0.66944122552934,2.01414658554573,0,2.92874469057803,1.10298924103761,1.62028389576352,3.03619076165871,5.83776368828041,5.85579698513276,1.53316637465883,3.79706263827252,1.28241220751285,0,0,1.3082821564276,0,1.39293562831038,8.20936921041957,18.9312169694217,1.77334191099179,1.68203280042692,2.1349799145941,0.74000264525148,5.91300967259556,5.52313755485721,8.50001896189985,4.8434376846378,6.33793516927999,2.34321431833797,1.87296046098192,2.85235910772225,0.448346041655403,5.51942143625695,6.151171885989,6.74163872170793,2.04154171254893,6.63305313483547,3.20309921644873,2.37600571456411,4.45080472701402,0.910161361938026,4.31170885089743,4.88174730466792,6.38104451347017,3.04770527032601,4.82875382968922,1.83892677479412,2.85452311922534,0.567160915800105,20.0916391971525,3.63047560991565,1.69545520927649,8.40255069036326,2.47326070172253,17.2619161830572,2.79175284497385,6.41350062516812,3.50773218580315,20.4471357137733,2.48534726334208,4.0411514204703,11.3603069605317,2.21654616100809,3.39121184620975,0.57978255948989,0.272746120590835,0.286804595389004,30.2494791201397,32.9999123120498,24.9816977169465,20.5248888930433,17.1578178595427,19.343800031019,3.12899064659632,2.57296375277154,2.76269842704961,4.64367928031979,2.16563844500876,1.8929088006375,2.19160097101532,2.6511213287183,2.97793726377464,3.7039505495709,1.18635309555548,1.8876383142423,1.37355025587742,1.53898862778556,2.95262181849859,2.80483547606892,1.2347220339942,5.88034845542168,0,0,3.54473944008842,0,0,2.91665277507493,1.09750285408626,2.24803506515239,4.72486170334665,2.31471112896324,1.95484983186195,3.11980435583874,5.77325368101093,4.63721619900307,0.939269553886573,0.866198686566443,0.925971025153221,1.90254152234598,0,0,0,0,0,0,0.335964256397719,1.13420077793909,0.626909658919938,2.3250715081117,4.60059214998253,0,0,0,0,0,1.07946420296687,1.52795370223311,2.34434894420094,5.13217338068116,5.55268460597947,2.40274446275134,2.00078502841405,4.26098120512371,5.23152082599936,1.9067954313447,0,3.57656445851882,1.690605505112,3.45719551560332,2.08014873822732,1.28603687131071,1.41849132023278,2.1313774321288,1.28680194292333,1.62786481617433,1.64648067356154,1.30294473717494,2.48774364119782,3.95975936466715,0.602878754119172,0,2.7992437530976,0,0,0,1.19812427745791,5.7430967917057,1.42636905040718,2.02693829334611,2.87666851570537,2.32779252211864,0,0,0,0,1.01637849688985,2.60279707715243,7.73288812777695,1.67516265334349,5.10351001322531,0,0,0,1.59498939234882,3.50119364741774,2.44138521329762,6.65506756898583,5.53129865271201,5.20417969611984,3.86566669475954,2.70851489754947,0,6.2083842775503,0.664225598535437,2.76553752812555,4.77859879574456,1.95801157462741,5.49029478097369,0,0,0,0.909382714338778,0,2.41912234663744,0.744323423456331,1.99500565274481,0.561320188866147,1.15325234330131,1.02341449813341,1.76939313257968,1.48418066444991,2.00472601943452,1.42049380250502,1.64254312027618,2.07701771673448,1.39452454151951,0,2.6065841139427,0.736647911487171,2.87036120411517,5.64482620820823,3.2781103739856,2.25599806453706,1.15523005656622,1.56869953835371,11.6911379722609,1.05551628892876,2.27466768141793,0.510281115829547,1.51141141271498,0,1.62567862526312,2.50844886927427,1.52925763827023,2.49322802678617,3.80587083027703,0,0,1.28225062558195,2.95213181129735,0,1.23649213977267,5.12789002982723,2.55779449753823,1.14853107599234,0.650060246036521,1.6068392984416,2.99679226705578,5.39170159901255,6.7541616879497,3.99726060205139,6.23037420235987,13.7765859218517,6.56245031103977,1.86967274858148,0.165284915360978,2.69066094311149,5.10450849978336,0.910420027699949,0,4.7221852024596,1.3940745403212,3.69640296211307,1.06461206063404,1.73986598415015,0.74129687641568,0.715624433709956,5.95453390975468,0.632758849437452,4.19386426632415,1.02359116524534,1.71175595213568,2.54562598340749,0.78494864019923,2.87795932133304,4.94166653524899,5.89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|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,1.0007329835313,1.78784437770915,4.36169262050184,0,1.89515962028049,0,0.491467873003018,2.09340350391728,1.31064823278103,1.31883489114227,0.618831764800233,1.65698687863958,0.672325146451775,1.20538905604795,0,2.43966399395253,5.41732655537867,6.12002073732759,4.07491137921514,8.87331560106276,9.30746090495612,8.66244213204139,0,0,0,0,0,1.85779347979291,0,1.8072355126695,1.84877005083394,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,4.02420515822182,0.511450247374121,3.61439152384566,2.00535164254356,2.60723734129483,0,0.486634870302636,8.88627281342238,9.53436409089025,6.67544371267758,3.1434978119451,1.45718115317017,1.85392221392215,0,0,0,0,0,0,2.58391129576717,1.72046919021225,5.20710752411391,1.69592382577203,0.838998872419812,1.6507082516404,1.8809546988313,1.03366703667732,1.77883131343355,0.66944122552934,2.01414658554573,0,2.92874469057803,1.10298924103761,1.62028389576352,3.03619076165871,5.83776368828041,5.85579698513276,1.53316637465883,3.79706263827252,1.28241220751285,0,0,1.3082821564276,0,1.39293562831038,8.20936921041957,18.9312169694217,1.77334191099179,1.68203280042692,2.1349799145941,0.74000264525148,5.91300967259556,5.52313755485721,8.50001896189985,4.8434376846378,6.33793516927999,2.34321431833797,1.87296046098192,2.85235910772225,0.448346041655403,5.51942143625695,6.151171885989,6.74163872170793,2.04154171254893,6.63305313483547,3.20309921644873,2.37600571456411,4.45080472701402,0.910161361938026,4.31170885089743,4.88174730466792,6.38104451347017,3.04770527032601,4.82875382968922,1.83892677479412,2.85452311922534,0.567160915800105,20.0916391971525,3.63047560991565,1.69545520927649,8.40255069036326,2.47326070172253,17.2619161830572,2.79175284497385,6.41350062516812,3.50773218580315,20.4471357137733,2.48534726334208,4.0411514204703,11.3603069605317,2.21654616100809,3.39121184620975,0.57978255948989,0.272746120590835,0.286804595389004,30.2494791201397,32.9999123120498,24.9816977169465,20.5248888930433,17.1578178595427,19.343800031019,3.12899064659632,2.57296375277154,2.76269842704961,4.64367928031979,2.16563844500876,1.8929088006375,2.19160097101532,2.6511213287183,2.97793726377464,3.7039505495709,1.18635309555548,1.8876383142423,1.37355025587742,1.53898862778556,2.95262181849859,2.80483547606892,1.2347220339942,5.88034845542168,0,0,3.54473944008842,0,0,2.91665277507493,1.09750285408626,2.24803506515239,4.72486170334665,2.31471112896324,1.95484983186195,3.11980435583874,5.77325368101093,4.63721619900307,0.939269553886573,0.866198686566443,0.925971025153221,1.90254152234598,0,0,0,0,0,0,0.335964256397719,1.13420077793909,0.626909658919938,2.3250715081117,4.60059214998253,0,0,0,0,0,1.07946420296687,1.52795370223311,2.34434894420094,5.13217338068116,5.55268460597947,2.40274446275134,2.00078502841405,4.26098120512371,5.23152082599936,1.9067954313447,0,3.57656445851882,1.690605505112,3.45719551560332,2.08014873822732,1.28603687131071,1.41849132023278,2.1313774321288,1.28680194292333,1.62786481617433,1.64648067356154,1.30294473717494,2.48774364119782,3.95975936466715,0.602878754119172,0,2.7992437530976,0,0,0,1.19812427745791,5.7430967917057,1.42636905040718,2.02693829334611,2.87666851570537,2.32779252211864,0,0,0,0,1.01637849688985,2.60279707715243,7.73288812777695,1.67516265334349,5.10351001322531,0,0,0,1.59498939234882,3.50119364741774,2.44138521329762,6.65506756898583,5.53129865271201,5.20417969611984,3.86566669475954,2.70851489754947,0,6.2083842775503,0.664225598535437,2.76553752812555,4.77859879574456,1.95801157462741,5.49029478097369,0,0,0,0.909382714338778,0,2.41912234663744,0.744323423456331,1.99500565274481,0.561320188866147,1.15325234330131,1.02341449813341,1.76939313257968,1.48418066444991,2.00472601943452,1.42049380250502,1.64254312027618,2.07701771673448,1.39452454151951,0,2.6065841139427,0.736647911487171,2.87036120411517,5.64482620820823,3.2781103739856,2.25599806453706,1.15523005656622,1.56869953835371,11.6911379722609,1.05551628892876,2.27466768141793,0.510281115829547,1.51141141271498,0,1.62567862526312,2.50844886927427,1.52925763827023,2.49322802678617,3.80587083027703,0,0,1.28225062558195,2.95213181129735,0,1.23649213977267,5.12789002982723,2.55779449753823,1.14853107599234,0.650060246036521,1.6068392984416,2.99679226705578,5.39170159901255,6.7541616879497,3.99726060205139,6.23037420235987,13.7765859218517,6.56245031103977,1.86967274858148,0.165284915360978,2.69066094311149,5.10450849978336,0.910420027699949,0,4.7221852024596,1.3940745403212,3.69640296211307,1.06461206063404,1.73986598415015,0.74129687641568,0.715624433709956,5.95453390975468,0.632758849437452,4.19386426632415,1.02359116524534,1.71175595213568,2.54562598340749,0.78494864019923,2.87795932133304,4.94166653524899,5.89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| ||
|short_description=p1@ENST00000530595,p1@uc001nkt.1 | |short_description=p1@ENST00000530595,p1@uc001nkt.1 | ||
}} | }} |
Latest revision as of 23:01, 23 July 2015
Short description: | p1@ENST00000530595, p1@uc001nkt.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000530595_5end, CAGE_peak_1_at_uc001nkt.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530595, uc001nkt.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-11 | 76 |
neurectodermal cell | 4.63e-10 | 59 |
embryonic cell | 1.50e-09 | 250 |
ectodermal cell | 3.44e-09 | 72 |
skin fibroblast | 4.41e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.53e-08 | 309 |
epithelium | 1.06e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.35e-07 | 22 |
germ cell cancer | 4.35e-07 | 22 |