FFCP PHASE1:Hg19::chr11:117056719..117056726,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51092 | |EntrezGene=51092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24272 | |HGNC=24272 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000529441_5end | |association_with_transcript=52bp_to_ENST00000529441_5end | ||
|cluster_id=chr11:117056719..117056726,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_28_at_SIDT2_5end | |description=CAGE_peak_28_at_SIDT2_5end | ||
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|ontology_enrichment_celltype=CL:0002087!3.63e-35!119;CL:0002194!6.43e-35!63;CL:0000576!6.43e-35!63;CL:0000040!6.43e-35!63;CL:0000559!6.43e-35!63;CL:0002009!1.20e-33!65;CL:0000738!2.17e-32!140;CL:0000839!8.87e-31!70;CL:0000766!2.57e-30!76;CL:0000557!2.97e-30!71;CL:0002031!1.96e-29!124;CL:0000037!7.55e-28!172;CL:0000566!7.55e-28!172;CL:0002057!1.87e-26!42;CL:0000988!8.87e-26!182;CL:0002032!1.58e-24!165;CL:0000837!1.58e-24!165;CL:0000860!2.29e-24!45;CL:0000763!1.05e-21!112;CL:0000049!1.05e-21!112;CL:0002393!5.32e-20!9;CL:0002397!5.32e-20!9;CL:0000875!1.11e-12!3;CL:0002396!1.11e-12!3;CL:0000236!2.32e-12!14;CL:0002619!3.81e-12!3;CL:0000134!5.49e-09!358;CL:0000945!1.21e-08!24;CL:0000826!1.21e-08!24;CL:0002320!1.25e-08!365;CL:0000219!2.25e-07!390 | |ontology_enrichment_celltype=CL:0002087!3.63e-35!119;CL:0002194!6.43e-35!63;CL:0000576!6.43e-35!63;CL:0000040!6.43e-35!63;CL:0000559!6.43e-35!63;CL:0002009!1.20e-33!65;CL:0000738!2.17e-32!140;CL:0000839!8.87e-31!70;CL:0000766!2.57e-30!76;CL:0000557!2.97e-30!71;CL:0002031!1.96e-29!124;CL:0000037!7.55e-28!172;CL:0000566!7.55e-28!172;CL:0002057!1.87e-26!42;CL:0000988!8.87e-26!182;CL:0002032!1.58e-24!165;CL:0000837!1.58e-24!165;CL:0000860!2.29e-24!45;CL:0000763!1.05e-21!112;CL:0000049!1.05e-21!112;CL:0002393!5.32e-20!9;CL:0002397!5.32e-20!9;CL:0000875!1.11e-12!3;CL:0002396!1.11e-12!3;CL:0000236!2.32e-12!14;CL:0002619!3.81e-12!3;CL:0000134!5.49e-09!358;CL:0000945!1.21e-08!24;CL:0000826!1.21e-08!24;CL:0002320!1.25e-08!365;CL:0000219!2.25e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000875;5.48e-55;3!CL:0002396;5.48e-55;3!CL:0000236;4.56e-13;13!CL:0000945;2.38e-07;24!CL:0000767;2.71e-07;3 | |ontology_enrichment_celltype_v019=CL:0000875;5.48e-55;3!CL:0002396;5.48e-55;3!CL:0000236;4.56e-13;13!CL:0000945;2.38e-07;24!CL:0000767;2.71e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000875,6.02e-55,3;CL:0002396,6.02e-55,3;CL:0002393,1.17e-32,9;CL:0002397,1.17e-32,9;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000738,1.44e-12,136;CL:0000037,2.92e-12,168;CL:0000236,3.07e-12,14;CL:0002087,4.53e-12,115;CL:0000988,1.32e-11,177;CL:0002031,1.51e-11,120;CL:0000766,7.90e-09,72;CL:0000763,8.30e-08,108;CL:0000049,8.30e-08,108;CL:0002194,1.14e-07,59;CL:0000576,1.14e-07,59;CL:0000040,1.14e-07,59;CL:0000559,1.14e-07,59;CL:0002009,2.02e-07,61;CL:0000945,2.20e-07,24;CL:0000826,2.20e-07,24;CL:0000767,2.63e-07,3;CL:0000860,2.80e-07,42;CL:0002057,2.80e-07,42;CL:0000839,7.25e-07,66;CL:0000557,9.15e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.74e-28!102;UBERON:0003061!5.74e-28!102;UBERON:0002193!1.01e-26!112;UBERON:0002371!4.12e-26!80;UBERON:0002405!5.78e-24!115;UBERON:0001474!7.89e-24!86;UBERON:0004765!2.62e-19!101;UBERON:0001434!2.62e-19!101;UBERON:0002106!2.25e-10!3;UBERON:0004854!2.25e-10!3;UBERON:0009034!2.25e-10!3;UBERON:0002095!2.25e-10!3;UBERON:0004782!2.25e-10!3;UBERON:0003281!2.25e-10!3;UBERON:0009664!2.25e-10!3;UBERON:0002296!2.25e-10!3;UBERON:0005602!2.25e-10!3;UBERON:0001179!2.25e-10!3;UBERON:0006293!2.25e-10!3;UBERON:0003081!3.41e-09!216;UBERON:0002204!3.89e-09!167;UBERON:0002384!3.84e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!5.74e-28!102;UBERON:0003061!5.74e-28!102;UBERON:0002193!1.01e-26!112;UBERON:0002371!4.12e-26!80;UBERON:0002405!5.78e-24!115;UBERON:0001474!7.89e-24!86;UBERON:0004765!2.62e-19!101;UBERON:0001434!2.62e-19!101;UBERON:0002106!2.25e-10!3;UBERON:0004854!2.25e-10!3;UBERON:0009034!2.25e-10!3;UBERON:0002095!2.25e-10!3;UBERON:0004782!2.25e-10!3;UBERON:0003281!2.25e-10!3;UBERON:0009664!2.25e-10!3;UBERON:0002296!2.25e-10!3;UBERON:0005602!2.25e-10!3;UBERON:0001179!2.25e-10!3;UBERON:0006293!2.25e-10!3;UBERON:0003081!3.41e-09!216;UBERON:0002204!3.89e-09!167;UBERON:0002384!3.84e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p28@SIDT2 | |short_description=p28@SIDT2 | ||
}} | }} |
Latest revision as of 20:45, 15 September 2015
Short description: | p28@SIDT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SIDT2_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 52bp_to_ENST00000529441_5end |
EntrezGene: | SIDT2 |
HGNC: | 24272 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 6.02e-55 | 3 |
CD14-low, CD16-positive monocyte | 6.02e-55 | 3 |
intermediate monocyte | 1.17e-32 | 9 |
CD14-positive, CD16-positive monocyte | 1.17e-32 | 9 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
leukocyte | 1.44e-12 | 136 |
hematopoietic stem cell | 2.92e-12 | 168 |
B cell | 3.07e-12 | 14 |
nongranular leukocyte | 4.53e-12 | 115 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.51e-11 | 120 |
myeloid leukocyte | 7.90e-09 | 72 |
myeloid cell | 8.30e-08 | 108 |
common myeloid progenitor | 8.30e-08 | 108 |
monopoietic cell | 1.14e-07 | 59 |
monocyte | 1.14e-07 | 59 |
monoblast | 1.14e-07 | 59 |
promonocyte | 1.14e-07 | 59 |
macrophage dendritic cell progenitor | 2.02e-07 | 61 |
lymphocyte of B lineage | 2.20e-07 | 24 |
pro-B cell | 2.20e-07 | 24 |
basophil | 2.63e-07 | 3 |
classical monocyte | 2.80e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-07 | 42 |
myeloid lineage restricted progenitor cell | 7.25e-07 | 66 |
granulocyte monocyte progenitor cell | 9.15e-07 | 67 |