FFCP PHASE1:Hg19::chr14:23863529..23863540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:23863529..23863540,- | |||
|coexpression_cluster_id=C188 | |coexpression_cluster_id=C188 | ||
|description=CAGE_peak_at_chr14:23863529..23863540,- | |description=CAGE_peak_at_chr14:23863529..23863540,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.62e-41;1!UBERON:0005062;4.94e-40;4!UBERON:0007284;4.94e-40;4 | |ontology_enrichment_development_v019=UBERON:0010227;6.62e-41;1!UBERON:0005062;4.94e-40;4!UBERON:0007284;4.94e-40;4 | ||
|ontology_enrichment_disease=DOID:114!1.56e-34!2;DOID:178!3.75e-18!1;DOID:326!3.75e-18!1;DOID:3978!3.75e-18!1;DOID:3394!3.75e-18!1;DOID:5844!3.75e-18!1;DOID:1287!8.04e-18!4 | |ontology_enrichment_disease=DOID:114!1.56e-34!2;DOID:178!3.75e-18!1;DOID:326!3.75e-18!1;DOID:3978!3.75e-18!1;DOID:3394!3.75e-18!1;DOID:5844!3.75e-18!1;DOID:1287!8.04e-18!4 | ||
|ontology_enrichment_disease_v019=DOID:114;2.34e-79;2!DOID:178;1.48e-40;1!DOID:326;1.48e-40;1!DOID:3978;1.48e-40;1!DOID:3394;1.48e-40;1!DOID:5844;1.48e-40;1!DOID:1287;2.22e-40;4 | |ontology_enrichment_disease_v019=DOID:114;2.34e-79;2!DOID:178;1.48e-40;1!DOID:326;1.48e-40;1!DOID:3978;1.48e-40;1!DOID:3394;1.48e-40;1!DOID:5844;1.48e-40;1!DOID:1287;2.22e-40;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,2.34e-79,2;DOID:178,1.48e-40,1;DOID:326,1.48e-40,1;DOID:3978,1.48e-40,1;DOID:3394,1.48e-40,1;DOID:5844,1.48e-40,1;DOID:1287,2.22e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.60e-39!27;UBERON:0003978!3.29e-23!3;UBERON:0009751!3.29e-23!3;UBERON:0004151!3.29e-23!3;UBERON:0000946!3.29e-23!3;UBERON:0002523!3.29e-23!3;UBERON:0005983!3.29e-23!3;UBERON:0002165!3.29e-23!3;UBERON:0002062!3.29e-23!3;UBERON:0007280!3.29e-23!3;UBERON:0003103!7.90e-19!69;UBERON:0002079!2.66e-18!1;UBERON:0002135!4.44e-18!1;UBERON:0002146!5.26e-18!1;UBERON:0005623!5.26e-18!1;UBERON:0002084!8.72e-18!1;UBERON:0002082!8.72e-18!1;UBERON:0004706!8.72e-18!1;UBERON:0007029!1.03e-17!1;UBERON:0001301!1.70e-17!1;UBERON:0000948!2.00e-17!24;UBERON:0005498!2.00e-17!24;UBERON:0004140!2.00e-17!24;UBERON:0009881!2.00e-17!24;UBERON:0004141!2.00e-17!24;UBERON:0003084!2.00e-17!24;UBERON:0007005!2.00e-17!24;UBERON:0004139!2.00e-17!24;UBERON:0004291!2.00e-17!24;UBERON:0002081!7.98e-10!2;UBERON:0002133!1.03e-09!2;UBERON:0001009!6.87e-09!113;UBERON:0007023!1.08e-08!115;UBERON:0002300!8.62e-07!3 | |ontology_enrichment_uberon=UBERON:0007100!7.60e-39!27;UBERON:0003978!3.29e-23!3;UBERON:0009751!3.29e-23!3;UBERON:0004151!3.29e-23!3;UBERON:0000946!3.29e-23!3;UBERON:0002523!3.29e-23!3;UBERON:0005983!3.29e-23!3;UBERON:0002165!3.29e-23!3;UBERON:0002062!3.29e-23!3;UBERON:0007280!3.29e-23!3;UBERON:0003103!7.90e-19!69;UBERON:0002079!2.66e-18!1;UBERON:0002135!4.44e-18!1;UBERON:0002146!5.26e-18!1;UBERON:0005623!5.26e-18!1;UBERON:0002084!8.72e-18!1;UBERON:0002082!8.72e-18!1;UBERON:0004706!8.72e-18!1;UBERON:0007029!1.03e-17!1;UBERON:0001301!1.70e-17!1;UBERON:0000948!2.00e-17!24;UBERON:0005498!2.00e-17!24;UBERON:0004140!2.00e-17!24;UBERON:0009881!2.00e-17!24;UBERON:0004141!2.00e-17!24;UBERON:0003084!2.00e-17!24;UBERON:0007005!2.00e-17!24;UBERON:0004139!2.00e-17!24;UBERON:0004291!2.00e-17!24;UBERON:0002081!7.98e-10!2;UBERON:0002133!1.03e-09!2;UBERON:0001009!6.87e-09!113;UBERON:0007023!1.08e-08!115;UBERON:0002300!8.62e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.39e-53;3!UBERON:0000946;6.39e-53;3!UBERON:0002079;6.62e-41;1!UBERON:0002135;2.21e-40;1!UBERON:0002146;3.30e-40;1!UBERON:0005623;3.30e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002081;3.11e-21;2!UBERON:0002133;5.70e-21;2!UBERON:0000948;5.72e-17;22!UBERON:0010313;9.54e-17;10!UBERON:0004151;1.22e-14;3!UBERON:0003103;1.00e-08;61 | |ontology_enrichment_uberon_v019=UBERON:0003978;6.39e-53;3!UBERON:0000946;6.39e-53;3!UBERON:0002079;6.62e-41;1!UBERON:0002135;2.21e-40;1!UBERON:0002146;3.30e-40;1!UBERON:0005623;3.30e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002081;3.11e-21;2!UBERON:0002133;5.70e-21;2!UBERON:0000948;5.72e-17;22!UBERON:0010313;9.54e-17;10!UBERON:0004151;1.22e-14;3!UBERON:0003103;1.00e-08;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,6.39e-53,3;UBERON:0009751,6.39e-53,3;UBERON:0000946,6.39e-53,3;UBERON:0002523,6.39e-53,3;UBERON:0005983,6.39e-53,3;UBERON:0002165,6.39e-53,3;UBERON:0002062,6.39e-53,3;UBERON:0007280,6.39e-53,3;UBERON:0002079,6.62e-41,1;UBERON:0002135,2.21e-40,1;UBERON:0002146,3.30e-40,1;UBERON:0005623,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0004797,2.02e-23,7;UBERON:0002081,3.11e-21,2;UBERON:0010227,3.11e-21,2;UBERON:0002133,5.70e-21,2;UBERON:0010313,9.54e-17,10;UBERON:0002342,9.54e-17,10;UBERON:0005062,9.54e-17,10;UBERON:0000948,1.25e-15,24;UBERON:0005498,1.25e-15,24;UBERON:0004140,1.25e-15,24;UBERON:0009881,1.25e-15,24;UBERON:0004141,1.25e-15,24;UBERON:0003084,1.25e-15,24;UBERON:0007005,1.25e-15,24;UBERON:0004139,1.25e-15,24;UBERON:0004291,1.25e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0004151,1.22e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0007023,2.58e-09,114 | |||
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|short_description=p@chr14:23863529..23863540,- | |short_description=p@chr14:23863529..23863540,- | ||
}} | }} |
Latest revision as of 19:32, 24 July 2015
Short description: | p@chr14:23863529..23863540, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23863529..23863540, - |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 6.39e-53 | 3 |
cardiac mesenchyme | 6.39e-53 | 3 |
cardial valve | 6.39e-53 | 3 |
tunica intima | 6.39e-53 | 3 |
heart layer | 6.39e-53 | 3 |
endocardium | 6.39e-53 | 3 |
endocardial cushion | 6.39e-53 | 3 |
presumptive endocardium | 6.39e-53 | 3 |
left cardiac atrium | 6.62e-41 | 1 |
mitral valve | 2.21e-40 | 1 |
pulmonary valve | 3.30e-40 | 1 |
semi-lunar valve | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
blood vessel layer | 2.02e-23 | 7 |
cardiac atrium | 3.11e-21 | 2 |
future cardiac atrium | 3.11e-21 | 2 |
atrioventricular valve | 5.70e-21 | 2 |
neural crest-derived structure | 9.54e-17 | 10 |
neural crest | 9.54e-17 | 10 |
neural fold | 9.54e-17 | 10 |
heart | 1.25e-15 | 24 |
primitive heart tube | 1.25e-15 | 24 |
primary heart field | 1.25e-15 | 24 |
anterior lateral plate mesoderm | 1.25e-15 | 24 |
heart tube | 1.25e-15 | 24 |
heart primordium | 1.25e-15 | 24 |
cardiac mesoderm | 1.25e-15 | 24 |
cardiogenic plate | 1.25e-15 | 24 |
heart rudiment | 1.25e-15 | 24 |
compound organ | 3.48e-15 | 68 |
cardiac chamber | 1.22e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
adult organism | 2.58e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.34e-79 | 2 |
vascular disease | 1.48e-40 | 1 |
ischemia | 1.48e-40 | 1 |
extrinsic cardiomyopathy | 1.48e-40 | 1 |
myocardial ischemia | 1.48e-40 | 1 |
myocardial infarction | 1.48e-40 | 1 |
cardiovascular system disease | 2.22e-40 | 4 |