FFCP PHASE1:Hg19::chr1:66797461..66797475,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TEK5 | |UniProt=Q5TEK5 | ||
|association_with_transcript=-211bp_to_ENST00000371045_5end | |association_with_transcript=-211bp_to_ENST00000371045_5end | ||
|cluster_id=chr1:66797461..66797475,+ | |||
|description=CAGE_peak_12_at_PDE4B_5end | |description=CAGE_peak_12_at_PDE4B_5end | ||
|id=chr1:66797461..66797475,+ | |id=chr1:66797461..66797475,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.99e-11!140;CL:0000542!2.11e-08!53;CL:0000051!2.11e-08!53;CL:0000838!3.59e-08!52;CL:0002087!1.08e-07!119;CL:0000236!1.11e-07!14;CL:0000988!2.13e-07!182;CL:0000037!4.01e-07!172;CL:0000566!4.01e-07!172 | |ontology_enrichment_celltype=CL:0000738!6.99e-11!140;CL:0000542!2.11e-08!53;CL:0000051!2.11e-08!53;CL:0000838!3.59e-08!52;CL:0002087!1.08e-07!119;CL:0000236!1.11e-07!14;CL:0000988!2.13e-07!182;CL:0000037!4.01e-07!172;CL:0000566!4.01e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.48e-12;13!CL:0000453;1.35e-09;5!CL:0000451;2.11e-09;10!CL:0000990;5.15e-07;8!CL:0000945;8.65e-07;24!CL:0000542;9.63e-07;53 | |ontology_enrichment_celltype_v019=CL:0000236;1.48e-12;13!CL:0000453;1.35e-09;5!CL:0000451;2.11e-09;10!CL:0000990;5.15e-07;8!CL:0000945;8.65e-07;24!CL:0000542;9.63e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.88e-14,136;CL:0000988,4.30e-12,177;CL:0000236,1.17e-11,14;CL:0000037,1.62e-10,168;CL:0000451,1.20e-09,10;CL:0000453,1.28e-09,5;CL:0000838,5.26e-09,52;CL:0000542,9.93e-09,53;CL:0000051,9.93e-09,53;CL:0002087,2.11e-08,115;CL:0002032,2.70e-08,161;CL:0000837,2.70e-08,161;CL:0002031,9.03e-08,120;CL:0000990,4.66e-07,8;CL:0000945,5.69e-07,24;CL:0000826,5.69e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;9.63e-07;53 | |ontology_enrichment_development_v019=CL:0000051;9.63e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.17e-10!115;UBERON:0001049!1.91e-07!57;UBERON:0005068!1.91e-07!57;UBERON:0006241!1.91e-07!57;UBERON:0007135!1.91e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!8.17e-10!115;UBERON:0001049!1.91e-07!57;UBERON:0005068!1.91e-07!57;UBERON:0006241!1.91e-07!57;UBERON:0007135!1.91e-07!57 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.12e-10,56;UBERON:0005068,4.12e-10,56;UBERON:0006241,4.12e-10,56;UBERON:0007135,4.12e-10,56;UBERON:0000073,1.18e-08,53;UBERON:0002616,1.18e-08,53;UBERON:0003075,1.67e-08,82;UBERON:0007284,1.67e-08,82;UBERON:0010371,1.95e-08,104;UBERON:0002346,8.85e-08,86;UBERON:0003528,4.04e-07,34;UBERON:0002020,4.04e-07,34;UBERON:0002780,7.20e-07,41;UBERON:0001890,7.20e-07,41;UBERON:0003080,7.20e-07,41;UBERON:0006240,7.20e-07,41 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.916960868975415,0.656804715599566,0.865818594450472,1.18009283054671,1.15148819429164,1.08371286321253,0,0,0,0.309868802321207,0.995184627411951,1.17440175733939,2.21598163412751,2.60707781711184,1.08505435357926,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,1.2808035326455,3.07426898855161,0.344745680736619,0,0,0.564727018627814,0.818718450173537,1.34834090667051,0.306083892370903,0.962787081228281,3.83602275479425,0.659702600373432,0.997318288108159,0,1.45104619314292,0.56738522469114,1.24564449799115,0,1.0429658368404,0.217188844705117,0.605399502633369,1.10483290796269,1.89877432464531,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0.48217676009124,0.285012743741249,0,0,3.51992488922645,0,3.55803701545422,2.13365111283254,3.2031678962881,1.72425731986345,3.30522436392431,1.90810750907073,5.69212969109448,12.9192181661607,9.17455747500549,1.32171328579026,0,0.263384084775077,0.786839080455332,2.75107533924415,1.02800749499755,0.668745981562712,1.30368906653436,0.946895611469467,0,0.111410456885174,1.76763544484902,0.664601683750863,0.541607727530031,0.512365278902701,0.260118695119756,0.657751618414705,0.552700035571697,0.579606171470105,0.593146252648242,0,0,0.226618685395132,3.06576394881537,2.74901956386104,2.02415753615602,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,2.62088766192152,2.40696176205157,1.73789284659359,0,0,0.12786256184353,0,3.00802746381534,2.60723734129483,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,2.62339686735876,2.85997455390064,1.85728750664782,0.39752481473341,0,0,0,0.419499436209906,0,0.417989933073621,0,0,2.00832367658802,0,1.52054421143703,0.24406205754817,0.367663080345869,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0.183201743930407,3.9534125230819,3.87780264148325,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.413303124703062,3.56400857184616,1.48360157567134,0,0,0,0.250237039743928,0.277064115484183,0.877955241761676,0.30648779579902,1.05166641234618,0.113432183160021,0.89694817844431,2.56268866582281,0.635795703478686,0.300091096084402,0.824420233907511,1.03056216018252,1.30281799432113,0.337552664482532,0.292311015483596,0.757301322732344,1.65689817556139,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15493158208859,1.85194205030644,2.66355813128438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0.317489471460845,0,1.17217447210047,3.4214489204541,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,1.42977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0,0.985153801009636,2.15627574859517,0.77005821767849,0.76228387266739,0,0,0.167516265334349,0,0.749007023947182,0,0,1.47229790062968,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,1.94142780736755,1.28073069364133,0,0,0.30239029332968,0,0.460385919864187,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.721287081534056,0.0915694648183434,0.742585499285292,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0.848432591722276,0,1.65409603063837,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.577076851905779,0,0,0.199579371432817,0.383010740264733,0.635020748171649,0.324621940274555,0,0.228234679033192,1.41011906195721,0,0.169291777801603,0,0,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,1.96937182974718,0.890469640183247,0.16480387422676,13.5120261201916,0.597743964753209,0,0,0.306806047506464,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,0,0.349839999984783,0,0,0,1.18193840883968,0,1.16641845353302,0.347249989866585,0,2.05013945663194,0,1.54810963903714,0,0.658156191461918,0.10893846351899,0,0.153900517007594,0.91153644677601,0,0,0,0.31900115973192,2.38153742844842,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.1769151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| ||
|short_description=p12@PDE4B | |short_description=p12@PDE4B | ||
}} | }} |
Latest revision as of 00:15, 19 September 2015
Short description: | p12@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PDE4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -211bp_to_ENST00000371045_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | Q5TEK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.88e-14 | 136 |
hematopoietic cell | 4.30e-12 | 177 |
B cell | 1.17e-11 | 14 |
hematopoietic stem cell | 1.62e-10 | 168 |
dendritic cell | 1.20e-09 | 10 |
Langerhans cell | 1.28e-09 | 5 |
lymphoid lineage restricted progenitor cell | 5.26e-09 | 52 |
lymphocyte | 9.93e-09 | 53 |
common lymphoid progenitor | 9.93e-09 | 53 |
nongranular leukocyte | 2.11e-08 | 115 |
hematopoietic oligopotent progenitor cell | 2.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.70e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 9.03e-08 | 120 |
conventional dendritic cell | 4.66e-07 | 8 |
lymphocyte of B lineage | 5.69e-07 | 24 |
pro-B cell | 5.69e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
neural tube | 4.12e-10 | 56 |
neural rod | 4.12e-10 | 56 |
future spinal cord | 4.12e-10 | 56 |
neural keel | 4.12e-10 | 56 |
regional part of nervous system | 1.18e-08 | 53 |
regional part of brain | 1.18e-08 | 53 |
neural plate | 1.67e-08 | 82 |
presumptive neural plate | 1.67e-08 | 82 |
ecto-epithelium | 1.95e-08 | 104 |
neurectoderm | 8.85e-08 | 86 |
brain grey matter | 4.04e-07 | 34 |
gray matter | 4.04e-07 | 34 |
regional part of forebrain | 7.20e-07 | 41 |
forebrain | 7.20e-07 | 41 |
anterior neural tube | 7.20e-07 | 41 |
future forebrain | 7.20e-07 | 41 |