FFCP PHASE1:Hg19::chr10:90974002..90974011,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90974002..90974011,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr10:90974002..90974011,- | |description=CAGE_peak_at_chr10:90974002..90974011,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000235!4.14e-09!10 | |ontology_enrichment_celltype=CL:0000235!4.14e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.69e-58;6!CL:0000840;7.10e-34;5!CL:0000990;7.21e-23;8!CL:0000451;7.44e-19;10!CL:0000473;7.17e-08;39!CL:0000234;7.17e-08;39 | |ontology_enrichment_celltype_v019=CL:0000235;1.69e-58;6!CL:0000840;7.10e-34;5!CL:0000990;7.21e-23;8!CL:0000451;7.44e-19;10!CL:0000473;7.17e-08;39!CL:0000234;7.17e-08;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.45e-58,6;CL:0000840,6.72e-34,5;CL:0001029,6.72e-34,5;CL:0000990,6.95e-23,8;CL:0000451,7.22e-19,10;CL:0002194,6.90e-18,59;CL:0000576,6.90e-18,59;CL:0000040,6.90e-18,59;CL:0000559,6.90e-18,59;CL:0002009,2.61e-17,61;CL:0000839,5.16e-16,66;CL:0000557,8.90e-16,67;CL:0000766,1.08e-14,72;CL:0000763,9.65e-13,108;CL:0000049,9.65e-13,108;CL:0002087,3.43e-09,115;CL:0002031,8.38e-09,120;CL:0002032,1.74e-08,161;CL:0000837,1.74e-08,161;CL:0000037,4.03e-08,168;CL:0000738,9.51e-08,136;CL:0000473,1.06e-07,48;CL:0000234,1.06e-07,48;CL:0000988,1.08e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.30e-08;3!DOID:127;1.30e-08;3!DOID:0060072;9.10e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;1.30e-08;3!DOID:127;1.30e-08;3!DOID:0060072;9.10e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.12e-08,3;DOID:127,1.12e-08,3;DOID:0060072,8.14e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.35e-14,76;UBERON:0001474,6.56e-13,82;UBERON:0004765,9.18e-12,90;UBERON:0002405,2.20e-11,93;UBERON:0002390,8.42e-11,98;UBERON:0003061,8.42e-11,98;UBERON:0001434,1.39e-10,100;UBERON:0002193,8.55e-10,108 | |||
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| ||
|short_description=p@chr10:90974002..90974011,- | |short_description=p@chr10:90974002..90974011,- | ||
}} | }} |
Latest revision as of 16:33, 23 July 2015
Short description: | p@chr10:90974002..90974011, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90974002..90974011, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.45e-58 | 6 |
immature conventional dendritic cell | 6.72e-34 | 5 |
common dendritic progenitor | 6.72e-34 | 5 |
conventional dendritic cell | 6.95e-23 | 8 |
dendritic cell | 7.22e-19 | 10 |
monopoietic cell | 6.90e-18 | 59 |
monocyte | 6.90e-18 | 59 |
monoblast | 6.90e-18 | 59 |
promonocyte | 6.90e-18 | 59 |
macrophage dendritic cell progenitor | 2.61e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.16e-16 | 66 |
granulocyte monocyte progenitor cell | 8.90e-16 | 67 |
myeloid leukocyte | 1.08e-14 | 72 |
myeloid cell | 9.65e-13 | 108 |
common myeloid progenitor | 9.65e-13 | 108 |
nongranular leukocyte | 3.43e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.38e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-08 | 161 |
hematopoietic stem cell | 4.03e-08 | 168 |
leukocyte | 9.51e-08 | 136 |
defensive cell | 1.06e-07 | 48 |
phagocyte | 1.06e-07 | 48 |
hematopoietic cell | 1.08e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.35e-14 | 76 |
bone element | 6.56e-13 | 82 |
skeletal element | 9.18e-12 | 90 |
immune system | 2.20e-11 | 93 |
hematopoietic system | 8.42e-11 | 98 |
blood island | 8.42e-11 | 98 |
skeletal system | 1.39e-10 | 100 |
hemolymphoid system | 8.55e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.12e-08 | 3 |
leiomyoma | 1.12e-08 | 3 |
benign neoplasm | 8.14e-07 | 4 |