FFCP PHASE1:Hg19::chr22:36424539..36424586,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:36424539..36424586,-
|short_description=p3@RBFOX2
|description=CAGE_peak_3_at_RBFOX2_5end
|association_with_transcript=0bp_to_NM_001082578,NM_001082579,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23543 | |EntrezGene=23543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9906 | |HGNC=9906 | ||
|TSSclassifier=strong | |||
|UniProt=O43251 | |UniProt=O43251 | ||
|association_with_transcript=0bp_to_NM_001082578,NM_001082579,uc003aon.3,uc003aoo.3_5end | |||
|cluster_id=chr22:36424539..36424586,- | |||
|description=CAGE_peak_3_at_RBFOX2_5end | |||
|id=chr22:36424539..36424586,- | |||
|ontology_enrichment_celltype=CL:0000055!6.54e-15!180;CL:0000057!1.49e-07!75;CL:0000183!2.56e-07!59;CL:0000680!3.44e-07!57;CL:0000056!3.44e-07!57;CL:0000355!3.44e-07!57;CL:0000187!5.53e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.73e-08,76;CL:0000680,3.88e-07,58;CL:0000056,3.88e-07,58;CL:0000355,3.88e-07,58;CL:0000187,6.29e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.44e-24!365;UBERON:0000119!1.81e-20!312;UBERON:0000483!3.48e-20!309;UBERON:0000924!2.59e-19!173;UBERON:0006601!2.59e-19!173;UBERON:0004121!7.97e-19!169;UBERON:0000481!1.77e-17!347;UBERON:0000468!2.20e-17!659;UBERON:0000477!6.08e-17!286;UBERON:0000033!8.09e-17!123;UBERON:0004111!5.65e-16!241;UBERON:0000955!6.11e-16!69;UBERON:0006238!6.11e-16!69;UBERON:0002616!6.87e-16!59;UBERON:0000073!1.80e-15!94;UBERON:0001016!1.80e-15!94;UBERON:0000153!4.81e-15!129;UBERON:0007811!4.81e-15!129;UBERON:0001869!1.00e-14!32;UBERON:0002346!1.03e-14!90;UBERON:0000467!1.06e-14!625;UBERON:0000480!1.62e-14!626;UBERON:0001049!1.73e-14!57;UBERON:0005068!1.73e-14!57;UBERON:0006241!1.73e-14!57;UBERON:0007135!1.73e-14!57;UBERON:0001017!2.03e-14!82;UBERON:0002619!2.24e-14!22;UBERON:0003075!2.52e-14!86;UBERON:0007284!2.52e-14!86;UBERON:0001893!4.41e-14!34;UBERON:0005743!5.37e-14!86;UBERON:0002020!9.54e-14!34;UBERON:0003528!9.54e-14!34;UBERON:0002780!1.41e-13!41;UBERON:0001890!1.41e-13!41;UBERON:0006240!1.41e-13!41;UBERON:0000025!1.47e-13!194;UBERON:0002791!1.76e-13!33;UBERON:0002050!1.88e-13!605;UBERON:0005423!1.88e-13!605;UBERON:0000922!2.26e-13!612;UBERON:0001950!2.52e-13!20;UBERON:0003080!2.68e-13!42;UBERON:0000923!4.70e-13!604;UBERON:0005291!4.70e-13!604;UBERON:0006598!4.70e-13!604;UBERON:0002532!4.70e-13!604;UBERON:0000956!2.99e-12!25;UBERON:0000203!2.99e-12!25;UBERON:0003056!8.77e-12!61;UBERON:0000914!1.10e-09!83;UBERON:0002329!1.10e-09!83;UBERON:0003077!1.10e-09!83;UBERON:0003059!1.10e-09!83;UBERON:0007282!1.10e-09!83;UBERON:0009618!1.10e-09!83;UBERON:0007285!1.10e-09!83;UBERON:0000064!1.58e-09!219;UBERON:0000486!8.24e-09!82;UBERON:0000062!3.28e-08!511;UBERON:0005256!8.14e-08!143;UBERON:0002100!1.85e-07!216;UBERON:0004290!2.15e-07!70;UBERON:0002385!7.90e-07!63;UBERON:0001015!7.90e-07!63;UBERON:0000383!7.90e-07!63;UBERON:0001134!8.95e-07!61;UBERON:0002036!8.95e-07!61;UBERON:0003082!8.95e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.83e-14;22!UBERON:0001950;2.12e-13;20!UBERON:0001869;2.51e-13;32!UBERON:0000956;1.82e-12;25!UBERON:0000203;1.82e-12;25!UBERON:0001893;2.16e-12;34!UBERON:0002791;2.45e-12;32!UBERON:0003528;2.82e-12;34!UBERON:0002020;2.82e-12;34!UBERON:0002780;4.64e-10;41!UBERON:0001890;4.64e-10;41!UBERON:0000073;7.30e-09;53!UBERON:0002616;7.30e-09;53!UBERON:0001017;3.49e-08;75!UBERON:0000955;4.02e-08;68!UBERON:0001016;2.78e-07;83 | |||
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| ||
|short_description=p3@RBFOX2 | |||
}} | }} |
Latest revision as of 01:15, 20 September 2015
Short description: | p3@RBFOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBFOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001082578, NM_001082579, uc003aon.3, uc003aoo.3_5end |
EntrezGene: | RBFOX2 |
HGNC: | 9906 |
UniProt: | O43251 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.73e-08 | 76 |
muscle precursor cell | 3.88e-07 | 58 |
myoblast | 3.88e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.88e-07 | 58 |
muscle cell | 6.29e-07 | 55 |