FFCP PHASE1:Hg19::chr13:79177629..79177636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5457 | |EntrezGene=5457 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9218 | |HGNC=9218 | ||
|TSSclassifier=strong | |||
|UniProt=Q01851 | |UniProt=Q01851 | ||
|association_with_transcript=36bp_to_ENST00000377208_5end | |association_with_transcript=36bp_to_ENST00000377208_5end | ||
|cluster_id=chr13:79177629..79177636,- | |||
|coexpression_cluster_id=C150 | |coexpression_cluster_id=C150 | ||
|description=CAGE_peak_4_at_POU4F1_5end | |description=CAGE_peak_4_at_POU4F1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!2.41e-09!2;CL:0002322!4.40e-07!5;CL:0000333!6.29e-07!41 | |ontology_enrichment_celltype=CL:0000242!2.41e-09!2;CL:0002322!4.40e-07!5;CL:0000333!6.29e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.82e-51;2!CL:0000242;8.82e-51;2!CL:0002553;7.62e-26;1!CL:0000312;4.91e-21;5!CL:0000240;1.03e-17;6!CL:0000311;1.03e-17;6!CL:0000079;1.03e-17;6!CL:0000237;1.03e-17;6!CL:0000362;3.74e-12;9!CL:0002159;3.76e-08;14 | |ontology_enrichment_celltype_v019=CL:0000123;8.82e-51;2!CL:0000242;8.82e-51;2!CL:0002553;7.62e-26;1!CL:0000312;4.91e-21;5!CL:0000240;1.03e-17;6!CL:0000311;1.03e-17;6!CL:0000079;1.03e-17;6!CL:0000237;1.03e-17;6!CL:0000362;3.74e-12;9!CL:0002159;3.76e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.82e-51,2;CL:0002553,4.61e-26,1;CL:0000312,4.92e-21,5;CL:0000240,1.03e-17,6;CL:0000311,1.03e-17,6;CL:0000079,1.03e-17,6;CL:0000237,1.03e-17,6;CL:0000036,1.03e-17,6;CL:0000357,1.03e-17,6;CL:0000114,1.03e-17,6;CL:0000362,3.74e-12,9;CL:0002159,3.76e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;1.03e-17;6!CL:0000114;1.03e-17;6 | |ontology_enrichment_development_v019=CL:0000357;1.03e-17;6!CL:0000114;1.03e-17;6 | ||
|ontology_enrichment_disease=DOID:14566!9.57e-11!239;DOID:162!2.34e-09!235;DOID:0050686!6.75e-07!137 | |ontology_enrichment_disease=DOID:14566!9.57e-11!239;DOID:162!2.34e-09!235;DOID:0050686!6.75e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:171;7.67e-11;10 | |ontology_enrichment_disease_v019=DOID:171;7.67e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,7.67e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000010!1.81e-10!8;UBERON:0000013!2.62e-07!5;UBERON:0002410!2.62e-07!5;UBERON:0003350!8.63e-07!5 | |ontology_enrichment_uberon=UBERON:0000010!1.81e-10!8;UBERON:0000013!2.62e-07!5;UBERON:0002410!2.62e-07!5;UBERON:0003350!8.63e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0001003;1.15e-07;15!UBERON:0007376;1.15e-07;15!UBERON:0002346;1.80e-07;4!UBERON:0000923;1.80e-07;4!UBERON:0010316;1.80e-07;4!UBERON:0005291;1.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3!UBERON:0001003;1.15e-07;15!UBERON:0007376;1.15e-07;15!UBERON:0002346;1.80e-07;4!UBERON:0000923;1.80e-07;4!UBERON:0010316;1.80e-07;4!UBERON:0005291;1.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.54e-09,3;UBERON:0005290,1.54e-09,3;UBERON:0010096,1.54e-09,3;UBERON:0001003,1.15e-07,15;UBERON:0007376,1.15e-07,15;UBERON:0007383,1.15e-07,15 | |||
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| ||
|short_description=p4@POU4F1 | |short_description=p4@POU4F1 | ||
}} | }} |
Latest revision as of 02:04, 18 September 2015
Short description: | p4@POU4F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POU4F1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | 36bp_to_ENST00000377208_5end |
EntrezGene: | POU4F1 |
HGNC: | 9218 |
UniProt: | Q01851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.82e-51 | 2 |
lung fibroblast | 4.61e-26 | 1 |
keratinocyte | 4.92e-21 | 5 |
stratified squamous epithelial cell | 1.03e-17 | 6 |
keratin accumulating cell | 1.03e-17 | 6 |
stratified epithelial cell | 1.03e-17 | 6 |
keratinizing barrier epithelial cell | 1.03e-17 | 6 |
epithelial fate stem cell | 1.03e-17 | 6 |
stratified epithelial stem cell | 1.03e-17 | 6 |
surface ectodermal cell | 1.03e-17 | 6 |
epidermal cell | 3.74e-12 | 9 |
general ecto-epithelial cell | 3.76e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.54e-09 | 3 |
myelencephalon | 1.54e-09 | 3 |
future myelencephalon | 1.54e-09 | 3 |
skin epidermis | 1.15e-07 | 15 |
outer epithelium | 1.15e-07 | 15 |
enveloping layer of ectoderm | 1.15e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.67e-11 | 10 |