FFCP PHASE1:Hg19::chr9:112191134..112191155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5774 | |EntrezGene=5774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9655 | |HGNC=9655 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3V3,P26045,Q8N4S3,B7ZA03 | |UniProt=B7Z3V3,P26045,Q8N4S3,B7ZA03 | ||
|association_with_transcript=167bp_to_NM_001145371,NM_001145372,uc011lwe.1,uc011lwf.1_5end | |association_with_transcript=167bp_to_NM_001145371,NM_001145372,uc011lwe.1,uc011lwf.1_5end | ||
|cluster_id=chr9:112191134..112191155,- | |||
|coexpression_cluster_id=C1296 | |coexpression_cluster_id=C1296 | ||
|description=CAGE_peak_5_at_PTPN3_5end | |description=CAGE_peak_5_at_PTPN3_5end | ||
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|ontology_enrichment_celltype=CL:0002586!1.21e-24!3;CL:0000149!1.20e-18!4;CL:0002127!1.03e-09!1;CL:0000914!1.03e-09!1;CL:0000911!1.03e-09!1;CL:0000814!1.03e-09!1;CL:0002042!1.03e-09!1;CL:0002039!1.03e-09!1;CL:0002040!1.03e-09!1;CL:0002041!1.03e-09!1 | |ontology_enrichment_celltype=CL:0002586!1.21e-24!3;CL:0000149!1.20e-18!4;CL:0002127!1.03e-09!1;CL:0000914!1.03e-09!1;CL:0000911!1.03e-09!1;CL:0000814!1.03e-09!1;CL:0002042!1.03e-09!1;CL:0002039!1.03e-09!1;CL:0002040!1.03e-09!1;CL:0002041!1.03e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;4.61e-26;1!CL:0000911;4.61e-26;1!CL:0000814;4.61e-26;1!CL:0002586;1.60e-09;3!CL:0000149;1.86e-07;4 | |ontology_enrichment_celltype_v019=CL:0002127;4.61e-26;1!CL:0000911;4.61e-26;1!CL:0000814;4.61e-26;1!CL:0002586;1.60e-09;3!CL:0000149;1.86e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.61e-26,1;CL:0000914,4.61e-26,1;CL:0000911,4.61e-26,1;CL:0000814,4.61e-26,1;CL:0002042,4.61e-26,1;CL:0002039,4.61e-26,1;CL:0002040,4.61e-26,1;CL:0002041,4.61e-26,1;CL:0000893,9.40e-14,2;CL:0002489,9.40e-14,2;CL:0000809,9.40e-14,2;CL:0000808,9.40e-14,2;CL:0000894,9.40e-14,2;CL:0000806,9.40e-14,2;CL:0000807,9.40e-14,2;CL:0000805,9.40e-14,2;CL:0002425,9.40e-14,2;CL:0002586,1.67e-09,3;CL:0000149,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.78e-26;1!CL:0002425;9.40e-14;2!UBERON:0009117;6.77e-11;10!UBERON:0005564;6.77e-11;10!UBERON:0003056;1.60e-09;3 | |ontology_enrichment_development_v019=UBERON:0006222;2.78e-26;1!CL:0002425;9.40e-14;2!UBERON:0009117;6.77e-11;10!UBERON:0005564;6.77e-11;10!UBERON:0003056;1.60e-09;3 | ||
|ontology_enrichment_disease=DOID:0060085!3.53e-09!1;DOID:3165!3.53e-09!1;DOID:0060121!3.53e-09!1;DOID:2438!3.53e-09!1;DOID:4418!3.53e-09!1 | |ontology_enrichment_disease=DOID:0060085!3.53e-09!1;DOID:3165!3.53e-09!1;DOID:0060121!3.53e-09!1;DOID:2438!3.53e-09!1;DOID:4418!3.53e-09!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!8.30e-40!5;UBERON:0005388!8.30e-40!5;UBERON:0001802!8.30e-40!5;UBERON:0001781!1.21e-24!3;UBERON:0001782!1.21e-24!3;UBERON:0005424!1.21e-24!3;UBERON:0005743!9.96e-18!86;UBERON:0001897!2.65e-17!2;UBERON:0003056!1.29e-16!61;UBERON:0000073!7.82e-16!94;UBERON:0001016!7.82e-16!94;UBERON:0003075!1.53e-15!86;UBERON:0007284!1.53e-15!86;UBERON:0002346!9.51e-15!90;UBERON:0000970!5.47e-14!20;UBERON:0002104!2.66e-13!21;UBERON:0000020!4.19e-12!23;UBERON:0001032!1.40e-11!24;UBERON:0004456!1.40e-11!24;UBERON:0007023!3.34e-11!115;UBERON:0001894!3.52e-11!7;UBERON:0006222!3.52e-11!7;UBERON:0000153!4.65e-11!129;UBERON:0007811!4.65e-11!129;UBERON:0000019!2.07e-10!19;UBERON:0000047!2.07e-10!19;UBERON:0004088!2.07e-10!19;UBERON:0003072!2.07e-10!19;UBERON:0003071!2.07e-10!19;UBERON:0004128!2.07e-10!19;UBERON:0000033!5.02e-10!123;UBERON:0001017!1.17e-09!82;UBERON:0000955!1.18e-09!69;UBERON:0006238!1.18e-09!69;UBERON:0002336!1.21e-09!1;UBERON:0001018!1.21e-09!1;UBERON:0002473!1.21e-09!1;UBERON:0005340!1.21e-09!1;UBERON:0002316!1.21e-09!1;UBERON:0003544!1.21e-09!1;UBERON:0001020!1.21e-09!1;UBERON:0005970!1.21e-09!1;UBERON:0002437!1.21e-09!1;UBERON:0006122!1.69e-09!1;UBERON:0001456!2.11e-09!21;UBERON:0003080!1.78e-08!42;UBERON:0001049!7.93e-08!57;UBERON:0005068!7.93e-08!57;UBERON:0006241!7.93e-08!57;UBERON:0007135!7.93e-08!57;UBERON:0004121!9.47e-08!169;UBERON:0002616!1.57e-07!59;UBERON:0000924!1.64e-07!173;UBERON:0006601!1.64e-07!173;UBERON:0007625!4.15e-07!11;UBERON:0005085!9.37e-07!29 | |ontology_enrichment_uberon=UBERON:0000966!8.30e-40!5;UBERON:0005388!8.30e-40!5;UBERON:0001802!8.30e-40!5;UBERON:0001781!1.21e-24!3;UBERON:0001782!1.21e-24!3;UBERON:0005424!1.21e-24!3;UBERON:0005743!9.96e-18!86;UBERON:0001897!2.65e-17!2;UBERON:0003056!1.29e-16!61;UBERON:0000073!7.82e-16!94;UBERON:0001016!7.82e-16!94;UBERON:0003075!1.53e-15!86;UBERON:0007284!1.53e-15!86;UBERON:0002346!9.51e-15!90;UBERON:0000970!5.47e-14!20;UBERON:0002104!2.66e-13!21;UBERON:0000020!4.19e-12!23;UBERON:0001032!1.40e-11!24;UBERON:0004456!1.40e-11!24;UBERON:0007023!3.34e-11!115;UBERON:0001894!3.52e-11!7;UBERON:0006222!3.52e-11!7;UBERON:0000153!4.65e-11!129;UBERON:0007811!4.65e-11!129;UBERON:0000019!2.07e-10!19;UBERON:0000047!2.07e-10!19;UBERON:0004088!2.07e-10!19;UBERON:0003072!2.07e-10!19;UBERON:0003071!2.07e-10!19;UBERON:0004128!2.07e-10!19;UBERON:0000033!5.02e-10!123;UBERON:0001017!1.17e-09!82;UBERON:0000955!1.18e-09!69;UBERON:0006238!1.18e-09!69;UBERON:0002336!1.21e-09!1;UBERON:0001018!1.21e-09!1;UBERON:0002473!1.21e-09!1;UBERON:0005340!1.21e-09!1;UBERON:0002316!1.21e-09!1;UBERON:0003544!1.21e-09!1;UBERON:0001020!1.21e-09!1;UBERON:0005970!1.21e-09!1;UBERON:0002437!1.21e-09!1;UBERON:0006122!1.69e-09!1;UBERON:0001456!2.11e-09!21;UBERON:0003080!1.78e-08!42;UBERON:0001049!7.93e-08!57;UBERON:0005068!7.93e-08!57;UBERON:0006241!7.93e-08!57;UBERON:0007135!7.93e-08!57;UBERON:0004121!9.47e-08!169;UBERON:0002616!1.57e-07!59;UBERON:0000924!1.64e-07!173;UBERON:0006601!1.64e-07!173;UBERON:0007625!4.15e-07!11;UBERON:0005085!9.37e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;8.64e-26;1!UBERON:0011215;8.64e-26;1!UBERON:0001018;8.64e-26;1!UBERON:0002473;8.64e-26;1!UBERON:0005340;8.64e-26;1!UBERON:0003544;8.64e-26;1!UBERON:0005970;8.64e-26;1!UBERON:0002316;8.64e-26;1!UBERON:0001020;8.64e-26;1!UBERON:0002437;8.64e-26;1!UBERON:0000966;1.34e-20;5!UBERON:0005388;1.34e-20;5!UBERON:0001802;1.34e-20;5!UBERON:0001894;2.47e-15;7!UBERON:0001897;6.43e-14;2!UBERON:0010225;6.43e-14;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2!UBERON:0000473;2.27e-13;8!UBERON:0003135;5.41e-10;11!UBERON:0001781;1.60e-09;3!UBERON:0001782;1.60e-09;3!UBERON:0002784;1.31e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002336;8.64e-26;1!UBERON:0011215;8.64e-26;1!UBERON:0001018;8.64e-26;1!UBERON:0002473;8.64e-26;1!UBERON:0005340;8.64e-26;1!UBERON:0003544;8.64e-26;1!UBERON:0005970;8.64e-26;1!UBERON:0002316;8.64e-26;1!UBERON:0001020;8.64e-26;1!UBERON:0002437;8.64e-26;1!UBERON:0000966;1.34e-20;5!UBERON:0005388;1.34e-20;5!UBERON:0001802;1.34e-20;5!UBERON:0001894;2.47e-15;7!UBERON:0001897;6.43e-14;2!UBERON:0010225;6.43e-14;2!UBERON:0005162;1.29e-13;2!UBERON:0000122;1.29e-13;2!UBERON:0000473;2.27e-13;8!UBERON:0003135;5.41e-10;11!UBERON:0001781;1.60e-09;3!UBERON:0001782;1.60e-09;3!UBERON:0002784;1.31e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,7.62e-26,1;UBERON:0011215,7.62e-26,1;UBERON:0001018,7.62e-26,1;UBERON:0002473,7.62e-26,1;UBERON:0005340,7.62e-26,1;UBERON:0003544,7.62e-26,1;UBERON:0005970,7.62e-26,1;UBERON:0002316,7.62e-26,1;UBERON:0001020,7.62e-26,1;UBERON:0002437,7.62e-26,1;UBERON:0000966,2.81e-17,6;UBERON:0005388,2.81e-17,6;UBERON:0001802,2.81e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0001897,6.43e-14,2;UBERON:0010225,6.43e-14,2;UBERON:0005162,1.21e-13,2;UBERON:0000122,1.21e-13,2;UBERON:0000473,2.07e-13,8;UBERON:0003056,3.13e-10,61;UBERON:0003135,5.06e-10,11;UBERON:0001782,1.67e-09,3;UBERON:0005424,1.67e-09,3;UBERON:0007023,6.31e-08,114;UBERON:0003075,1.09e-07,82;UBERON:0007284,1.09e-07,82;UBERON:0002784,1.31e-07,4;UBERON:0002370,1.59e-07,4;UBERON:0005058,1.59e-07,4;UBERON:0009113,1.59e-07,4;UBERON:0003295,1.59e-07,4;UBERON:0005562,1.59e-07,4;UBERON:0001781,1.92e-07,4;UBERON:0002346,2.42e-07,86 | |||
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|short_description=p5@PTPN3 | |short_description=p5@PTPN3 | ||
}} | }} |
Latest revision as of 02:13, 20 September 2015
Short description: | p5@PTPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPN3_5end |
Coexpression cluster: | C1296_thalamus_diencephalon_NK_corpus_heart_testis_left |
Association with transcript: | 167bp_to_NM_001145371, NM_001145372, uc011lwe.1, uc011lwf.1_5end |
EntrezGene: | PTPN3 |
HGNC: | 9655 |
UniProt: | B7Z3V3P26045Q8N4S3B7ZA03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.61e-26 | 1 |
immature NK T cell | 4.61e-26 | 1 |
effector T cell | 4.61e-26 | 1 |
mature NK T cell | 4.61e-26 | 1 |
immature NK T cell stage IV | 4.61e-26 | 1 |
immature NK T cell stage I | 4.61e-26 | 1 |
immature NK T cell stage II | 4.61e-26 | 1 |
immature NK T cell stage III | 4.61e-26 | 1 |
thymocyte | 9.40e-14 | 2 |
double negative thymocyte | 9.40e-14 | 2 |
double-positive, alpha-beta thymocyte | 9.40e-14 | 2 |
DN4 thymocyte | 9.40e-14 | 2 |
DN1 thymic pro-T cell | 9.40e-14 | 2 |
DN2 thymocyte | 9.40e-14 | 2 |
DN3 thymocyte | 9.40e-14 | 2 |
immature single positive thymocyte | 9.40e-14 | 2 |
early T lineage precursor | 9.40e-14 | 2 |
retinal pigment epithelial cell | 1.67e-09 | 3 |
visual pigment cell | 1.92e-07 | 4 |