FFCP PHASE1:Hg19::chr10:17270313..17270321,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7431 | |EntrezGene=7431 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12692 | |HGNC=12692 | ||
|TSSclassifier=strong | |||
|UniProt=P08670 | |UniProt=P08670 | ||
|association_with_transcript=55bp_to_ENST00000478317,ENST00000544301,NM_003380,uc001iou.2_5end | |association_with_transcript=55bp_to_ENST00000478317,ENST00000544301,NM_003380,uc001iou.2_5end | ||
|cluster_id=chr10:17270313..17270321,+ | |||
|coexpression_cluster_id=C168 | |coexpression_cluster_id=C168 | ||
|description=CAGE_peak_17_at_VIM_5end | |description=CAGE_peak_17_at_VIM_5end | ||
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|ontology_enrichment_development_v019=CL:0002057;2.93e-20;42 | |ontology_enrichment_development_v019=CL:0002057;2.93e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.84e-33,76;UBERON:0001474,2.47e-30,82;UBERON:0004765,2.27e-27,90;UBERON:0002405,2.18e-26,93;UBERON:0002390,6.97e-25,98;UBERON:0003061,6.97e-25,98;UBERON:0001434,2.53e-24,100;UBERON:0002193,2.75e-22,108;UBERON:0002204,3.05e-13,167;UBERON:0003081,2.76e-10,203;UBERON:0002384,5.43e-10,371 | |||
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|short_description=p17@VIM | |short_description=p17@VIM | ||
}} | }} |
Latest revision as of 10:16, 17 September 2015
Short description: | p17@VIM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_VIM_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | 55bp_to_ENST00000478317, ENST00000544301, NM_003380, uc001iou.2_5end |
EntrezGene: | VIM |
HGNC: | 12692 |
UniProt: | P08670 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.84e-33 | 76 |
bone element | 2.47e-30 | 82 |
skeletal element | 2.27e-27 | 90 |
immune system | 2.18e-26 | 93 |
hematopoietic system | 6.97e-25 | 98 |
blood island | 6.97e-25 | 98 |
skeletal system | 2.53e-24 | 100 |
hemolymphoid system | 2.75e-22 | 108 |
musculoskeletal system | 3.05e-13 | 167 |
lateral plate mesoderm | 2.76e-10 | 203 |
connective tissue | 5.43e-10 | 371 |