FFCP PHASE1:Hg19::chr22:47325399..47325432,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:47325399..47325432,+ | |||
|coexpression_cluster_id=C3388 | |coexpression_cluster_id=C3388 | ||
|description=CAGE_peak_at_chr22:47325399..47325432,+ | |description=CAGE_peak_at_chr22:47325399..47325432,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!1.68e-19!10;CL:0000541!1.68e-19!10;CL:0002567!6.22e-17!3;CL:0000147!5.18e-14!14;CL:0002566!1.61e-13!1;CL:0000710!7.08e-10!20;CL:0000075!2.32e-07!27 | |ontology_enrichment_celltype=CL:0000148!1.68e-19!10;CL:0000541!1.68e-19!10;CL:0002567!6.22e-17!3;CL:0000147!5.18e-14!14;CL:0002566!1.61e-13!1;CL:0000710!7.08e-10!20;CL:0000075!2.32e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002566;2.41e-50;1!CL:0000148;5.64e-45;10!CL:0000147;1.81e-32;14!CL:0000710;4.59e-23;20!CL:0002567;1.12e-17;3!CL:0000075;2.34e-17;27!CL:0000149;1.00e-13;4!CL:0002077;1.69e-12;34 | |ontology_enrichment_celltype_v019=CL:0002566;2.41e-50;1!CL:0000148;5.64e-45;10!CL:0000147;1.81e-32;14!CL:0000710;4.59e-23;20!CL:0002567;1.12e-17;3!CL:0000075;2.34e-17;27!CL:0000149;1.00e-13;4!CL:0002077;1.69e-12;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.46e-50,1;CL:0000148,5.64e-45,10;CL:0000541,5.64e-45,10;CL:0000147,1.81e-32,14;CL:0000710,4.59e-23,20;CL:0002567,1.12e-17,3;CL:0000075,2.34e-17,27;CL:0002077,5.47e-14,34;CL:0000149,1.13e-13,4;CL:0000333,2.95e-11,41;CL:0000133,3.42e-08,59;CL:0000221,6.78e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!6.29e-25!2 | |ontology_enrichment_disease=DOID:1909!6.29e-25!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;5.56e-26;2 | |ontology_enrichment_disease_v019=DOID:1909;5.56e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0003112!4.23e-13!1;UBERON:0000032!4.23e-13!1;UBERON:0005253!4.23e-13!1;UBERON:0003128!4.23e-13!1;UBERON:0002241!4.23e-13!1;UBERON:0001703!4.23e-13!1;UBERON:0004761!4.23e-13!1;UBERON:0009617!4.23e-13!1;UBERON:0001954!4.69e-07!2;UBERON:0003022!4.69e-07!2;UBERON:0002421!4.69e-07!2;UBERON:0002600!4.69e-07!2 | |ontology_enrichment_uberon=UBERON:0003112!4.23e-13!1;UBERON:0000032!4.23e-13!1;UBERON:0005253!4.23e-13!1;UBERON:0003128!4.23e-13!1;UBERON:0002241!4.23e-13!1;UBERON:0001703!4.23e-13!1;UBERON:0004761!4.23e-13!1;UBERON:0009617!4.23e-13!1;UBERON:0001954!4.69e-07!2;UBERON:0003022!4.69e-07!2;UBERON:0002421!4.69e-07!2;UBERON:0002600!4.69e-07!2 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53991577168676,0.763976851116555,0,1.71072446022705,0,2.10240140490742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,2.28372266835974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53991577168676,0.763976851116555,0,1.71072446022705,0,2.10240140490742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,2.28372266835974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:47325399..47325432,+ | |short_description=p@chr22:47325399..47325432,+ | ||
}} | }} |
Latest revision as of 22:13, 28 July 2015
Short description: | p@chr22:47325399..47325432, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:47325399..47325432, + |
Coexpression cluster: | C3388_melanoma_Melanocyte_Mast_leiomyoblastoma_Burkitt_small_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.46e-50 | 1 |
melanocyte | 5.64e-45 | 10 |
melanoblast | 5.64e-45 | 10 |
pigment cell | 1.81e-32 | 14 |
neurecto-epithelial cell | 4.59e-23 | 20 |
light melanocyte | 1.12e-17 | 3 |
columnar/cuboidal epithelial cell | 2.34e-17 | 27 |
ecto-epithelial cell | 5.47e-14 | 34 |
visual pigment cell | 1.13e-13 | 4 |
migratory neural crest cell | 2.95e-11 | 41 |
neurectodermal cell | 3.42e-08 | 59 |
ectodermal cell | 6.78e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.56e-26 | 2 |