FFCP PHASE1:Hg19::chr12:7592633..7592671,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000538078_5end | |association_with_transcript=-47bp_to_ENST00000538078_5end | ||
|cluster_id=chr12:7592633..7592671,- | |||
|description=CAGE_peak_1_at_ENST00000538078_5end | |description=CAGE_peak_1_at_ENST00000538078_5end | ||
|id=chr12:7592633..7592671,- | |id=chr12:7592633..7592671,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.63e-10;7!CL:0000586;2.63e-10;7!CL:0000082;4.81e-08;19 | |ontology_enrichment_celltype_v019=CL:0000039;2.63e-10;7!CL:0000586;2.63e-10;7!CL:0000082;4.81e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-10,7;CL:0000586,1.13e-10,7;CL:0000082,5.65e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050615;3.73e-13;16!DOID:1324;2.30e-10;15!DOID:3908;1.25e-08;5!DOID:4556;5.15e-07;3 | |ontology_enrichment_disease_v019=DOID:0050615;3.73e-13;16!DOID:1324;2.30e-10;15!DOID:3908;1.25e-08;5!DOID:4556;5.15e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0050615,4.67e-13,16;DOID:1324,2.83e-10,15;DOID:3908,1.14e-08,5;DOID:3095,5.82e-07,22;DOID:2994,5.82e-07,22;DOID:4556,6.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.47e-10!115;UBERON:0001049!2.04e-09!57;UBERON:0005068!2.04e-09!57;UBERON:0006241!2.04e-09!57;UBERON:0007135!2.04e-09!57;UBERON:0003075!2.08e-09!86;UBERON:0007284!2.08e-09!86;UBERON:0002616!2.84e-09!59;UBERON:0002020!3.11e-09!34;UBERON:0003528!3.11e-09!34;UBERON:0002346!3.82e-09!90;UBERON:0001869!4.05e-09!32;UBERON:0002780!4.25e-09!41;UBERON:0001890!4.25e-09!41;UBERON:0006240!4.25e-09!41;UBERON:0001893!1.23e-08!34;UBERON:0003080!1.26e-08!42;UBERON:0002791!2.99e-08!33;UBERON:0003056!3.55e-08!61;UBERON:0002619!3.50e-07!22;UBERON:0001950!3.66e-07!20;UBERON:0000956!6.57e-07!25;UBERON:0000203!6.57e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!9.47e-10!115;UBERON:0001049!2.04e-09!57;UBERON:0005068!2.04e-09!57;UBERON:0006241!2.04e-09!57;UBERON:0007135!2.04e-09!57;UBERON:0003075!2.08e-09!86;UBERON:0007284!2.08e-09!86;UBERON:0002616!2.84e-09!59;UBERON:0002020!3.11e-09!34;UBERON:0003528!3.11e-09!34;UBERON:0002346!3.82e-09!90;UBERON:0001869!4.05e-09!32;UBERON:0002780!4.25e-09!41;UBERON:0001890!4.25e-09!41;UBERON:0006240!4.25e-09!41;UBERON:0001893!1.23e-08!34;UBERON:0003080!1.26e-08!42;UBERON:0002791!2.99e-08!33;UBERON:0003056!3.55e-08!61;UBERON:0002619!3.50e-07!22;UBERON:0001950!3.66e-07!20;UBERON:0000956!6.57e-07!25;UBERON:0000203!6.57e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.06e-14;22!UBERON:0001950;3.64e-12;20!UBERON:0000956;4.30e-12;25!UBERON:0000203;4.30e-12;25!UBERON:0002791;2.05e-10;32!UBERON:0001869;2.05e-10;32!UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0003528;1.99e-09;34!UBERON:0002020;1.99e-09;34!UBERON:0001893;1.32e-08;34!UBERON:0002021;2.46e-08;5!UBERON:0004802;4.81e-08;19!UBERON:0000115;4.81e-08;19!UBERON:0002048;7.39e-07;22!UBERON:0004807;7.39e-07;22!UBERON:0000117;7.39e-07;22!UBERON:0000171;7.39e-07;22!UBERON:0000170;7.39e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002619;7.06e-14;22!UBERON:0001950;3.64e-12;20!UBERON:0000956;4.30e-12;25!UBERON:0000203;4.30e-12;25!UBERON:0002791;2.05e-10;32!UBERON:0001869;2.05e-10;32!UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0003528;1.99e-09;34!UBERON:0002020;1.99e-09;34!UBERON:0001893;1.32e-08;34!UBERON:0002021;2.46e-08;5!UBERON:0004802;4.81e-08;19!UBERON:0000115;4.81e-08;19!UBERON:0002048;7.39e-07;22!UBERON:0004807;7.39e-07;22!UBERON:0000117;7.39e-07;22!UBERON:0000171;7.39e-07;22!UBERON:0000170;7.39e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.98e-14,22;UBERON:0001950,4.50e-12,20;UBERON:0000956,4.78e-12,25;UBERON:0000203,4.78e-12,25;UBERON:0002791,2.93e-11,32;UBERON:0001869,2.93e-11,32;UBERON:0003528,1.65e-10,34;UBERON:0002020,1.65e-10,34;UBERON:0001893,1.65e-10,34;UBERON:0002780,2.66e-10,41;UBERON:0001890,2.66e-10,41;UBERON:0003080,2.66e-10,41;UBERON:0006240,2.66e-10,41;UBERON:0002021,2.12e-08,5;UBERON:0004802,5.65e-08,19;UBERON:0000115,5.65e-08,19;UBERON:0003056,1.31e-07,61;UBERON:0000073,1.51e-07,53;UBERON:0002616,1.51e-07,53;UBERON:0001049,4.82e-07,56;UBERON:0005068,4.82e-07,56;UBERON:0006241,4.82e-07,56;UBERON:0007135,4.82e-07,56;UBERON:0002048,8.46e-07,22;UBERON:0000117,8.46e-07,22;UBERON:0000171,8.46e-07,22;UBERON:0000170,8.46e-07,22;UBERON:0005597,8.46e-07,22;UBERON:0000118,8.46e-07,22 | |||
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| ||
|short_description=p1@ENST00000538078 | |short_description=p1@ENST00000538078 | ||
}} | }} |
Latest revision as of 12:24, 24 July 2015
Short description: | p1@ENST00000538078 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000538078_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000538078_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.13e-10 | 7 |
germ cell | 1.13e-10 | 7 |
epithelial cell of lung | 5.65e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 7.98e-14 | 22 |
neocortex | 4.50e-12 | 20 |
cerebral cortex | 4.78e-12 | 25 |
pallium | 4.78e-12 | 25 |
regional part of telencephalon | 2.93e-11 | 32 |
cerebral hemisphere | 2.93e-11 | 32 |
brain grey matter | 1.65e-10 | 34 |
gray matter | 1.65e-10 | 34 |
telencephalon | 1.65e-10 | 34 |
regional part of forebrain | 2.66e-10 | 41 |
forebrain | 2.66e-10 | 41 |
anterior neural tube | 2.66e-10 | 41 |
future forebrain | 2.66e-10 | 41 |
occipital lobe | 2.12e-08 | 5 |
respiratory tract epithelium | 5.65e-08 | 19 |
lung epithelium | 5.65e-08 | 19 |
pre-chordal neural plate | 1.31e-07 | 61 |
regional part of nervous system | 1.51e-07 | 53 |
regional part of brain | 1.51e-07 | 53 |
neural tube | 4.82e-07 | 56 |
neural rod | 4.82e-07 | 56 |
future spinal cord | 4.82e-07 | 56 |
neural keel | 4.82e-07 | 56 |
lung | 8.46e-07 | 22 |
respiratory tube | 8.46e-07 | 22 |
respiration organ | 8.46e-07 | 22 |
pair of lungs | 8.46e-07 | 22 |
lung primordium | 8.46e-07 | 22 |
lung bud | 8.46e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 4.67e-13 | 16 |
lung cancer | 2.83e-10 | 15 |
non-small cell lung carcinoma | 1.14e-08 | 5 |
germ cell and embryonal cancer | 5.82e-07 | 22 |
germ cell cancer | 5.82e-07 | 22 |
lung large cell carcinoma | 6.19e-07 | 3 |