FFCP PHASE1:Hg19::chr22:31739255..31739259,-: Difference between revisions
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|id=chr22:31739255..31739259,-
|short_description=p28@PATZ1
|description=CAGE_peak_28_at_PATZ1_5end
|association_with_transcript=11bp_to_ENST00000494109_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23598 | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |HGNC=13071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000494109_5end | |||
|cluster_id=chr22:31739255..31739259,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_28_at_PATZ1_5end | |||
|id=chr22:31739255..31739259,- | |||
|ontology_enrichment_celltype=CL:0002605!4.43e-21!3;CL:0002586!3.33e-10!3;CL:0000064!1.12e-09!3;CL:0005012!1.12e-09!3;CL:0000067!1.12e-09!3;CL:0002304!1.12e-09!3;CL:0000128!2.45e-09!7;CL:0000126!2.45e-09!7;CL:0000127!2.45e-09!7;CL:0002453!2.45e-09!7;CL:0000313!1.65e-08!1;CL:0002319!1.80e-08!25;CL:0000047!4.91e-08!8;CL:0000342!6.19e-08!1;CL:0002565!6.19e-08!1;CL:0000147!7.32e-08!14;CL:0000149!7.36e-08!4;CL:0000133!2.06e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.42e-195;1!CL:0000159;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.42e-195,1;CL:0000159,1.55e-98,2;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease=DOID:2152!1.65e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.42e-195;1!DOID:2394;1.43e-15;14!DOID:299;2.15e-09;25!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.42e-195,1;DOID:2394,1.43e-15,14;DOID:299,2.15e-09,25;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.39e-21!11;UBERON:0000970!1.05e-15!20;UBERON:0000488!2.39e-15!4;UBERON:0002104!6.40e-15!21;UBERON:0000020!1.50e-13!23;UBERON:0001032!5.95e-13!24;UBERON:0004456!5.95e-13!24;UBERON:0000019!2.73e-12!19;UBERON:0000047!2.73e-12!19;UBERON:0004088!2.73e-12!19;UBERON:0003072!2.73e-12!19;UBERON:0003071!2.73e-12!19;UBERON:0004128!2.73e-12!19;UBERON:0001456!4.54e-11!21;UBERON:0003075!1.58e-10!86;UBERON:0007284!1.58e-10!86;UBERON:0002203!2.06e-10!6;UBERON:0001768!2.06e-10!6;UBERON:0001781!3.33e-10!3;UBERON:0001782!3.33e-10!3;UBERON:0005424!3.33e-10!3;UBERON:0002240!3.49e-10!3;UBERON:0002346!5.88e-10!90;UBERON:0001778!1.12e-09!3;UBERON:0001775!1.12e-09!3;UBERON:0003056!4.02e-09!61;UBERON:0005743!9.72e-09!86;UBERON:0004911!1.65e-08!1;UBERON:0002506!6.19e-08!1;UBERON:0001769!6.19e-08!1;UBERON:0005085!7.24e-08!29;UBERON:0001801!8.47e-08!14;UBERON:0000073!9.99e-08!94;UBERON:0001016!9.99e-08!94;UBERON:0004121!8.53e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.42e-195;1!UBERON:0004909;1.55e-98;2!UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.42e-195,1;UBERON:0004909,1.55e-98,2;UBERON:0000992,1.21e-16,13;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p28@PATZ1 | |||
}} | }} |
Latest revision as of 20:27, 19 September 2015
Short description: | p28@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_PATZ1_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 11bp_to_ENST00000494109_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 5.42e-195 | 1 |
seromucus secreting cell | 1.55e-98 | 2 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 5.42e-195 | 1 |
epithelium of gonad | 1.55e-98 | 2 |
female gonad | 1.21e-16 | 13 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 5.42e-195 | 1 |
ovarian cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |