FFCP PHASE1:Hg19::chr8:18711750..18711796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000518303_5end | |association_with_transcript=49bp_to_ENST00000518303_5end | ||
|cluster_id=chr8:18711750..18711796,- | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_13_at_PSD3_5end | |description=CAGE_peak_13_at_PSD3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.39e-14;5!CL:0000064;4.08e-09;3!CL:0000067;4.08e-09;3!CL:0005012;4.08e-09;3!CL:0002304;4.08e-09;3!CL:0000990;8.84e-08;8 | |ontology_enrichment_celltype_v019=CL:0000453;2.39e-14;5!CL:0000064;4.08e-09;3!CL:0000067;4.08e-09;3!CL:0005012;4.08e-09;3!CL:0002304;4.08e-09;3!CL:0000990;8.84e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.28e-14,5;CL:0000064,3.84e-09,3;CL:0000067,3.84e-09,3;CL:0005012,3.84e-09,3;CL:0002304,3.84e-09,3;CL:0000990,6.36e-08,8 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1287;4.05e-07;4!DOID:114;7.52e-07;2 | |ontology_enrichment_disease_v019=DOID:1287;4.05e-07;4!DOID:114;7.52e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1287,3.60e-07,4;DOID:114,7.46e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-25!115;UBERON:0002346!3.97e-11!90;UBERON:0003075!7.23e-11!86;UBERON:0007284!7.23e-11!86;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0002616!2.09e-09!59;UBERON:0001017!7.98e-09!82;UBERON:0005743!1.49e-08!86;UBERON:0000955!4.10e-08!69;UBERON:0006238!4.10e-08!69;UBERON:0002780!7.37e-08!41;UBERON:0001890!7.37e-08!41;UBERON:0006240!7.37e-08!41;UBERON:0003056!9.65e-08!61;UBERON:0000073!1.58e-07!94;UBERON:0001016!1.58e-07!94;UBERON:0003080!1.72e-07!42;UBERON:0001893!1.89e-07!34;UBERON:0002020!2.46e-07!34;UBERON:0003528!2.46e-07!34;UBERON:0002791!4.67e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!1.09e-25!115;UBERON:0002346!3.97e-11!90;UBERON:0003075!7.23e-11!86;UBERON:0007284!7.23e-11!86;UBERON:0001049!1.16e-09!57;UBERON:0005068!1.16e-09!57;UBERON:0006241!1.16e-09!57;UBERON:0007135!1.16e-09!57;UBERON:0002616!2.09e-09!59;UBERON:0001017!7.98e-09!82;UBERON:0005743!1.49e-08!86;UBERON:0000955!4.10e-08!69;UBERON:0006238!4.10e-08!69;UBERON:0002780!7.37e-08!41;UBERON:0001890!7.37e-08!41;UBERON:0006240!7.37e-08!41;UBERON:0003056!9.65e-08!61;UBERON:0000073!1.58e-07!94;UBERON:0001016!1.58e-07!94;UBERON:0003080!1.72e-07!42;UBERON:0001893!1.89e-07!34;UBERON:0002020!2.46e-07!34;UBERON:0003528!2.46e-07!34;UBERON:0002791!4.67e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.08e-09;3!UBERON:0001775;4.08e-09;3!UBERON:0007100;5.22e-08;25!UBERON:0000922;7.88e-08;49!UBERON:0000488;6.41e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001778;4.08e-09;3!UBERON:0001775;4.08e-09;3!UBERON:0007100;5.22e-08;25!UBERON:0000922;7.88e-08;49!UBERON:0000488;6.41e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.84e-09,3;UBERON:0001775,3.84e-09,3;UBERON:0007100,2.94e-07,27;UBERON:0007023,3.36e-07,114;UBERON:0000488,6.13e-07,4 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0.85870796139317,0,0.753255837568817,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24564449799115,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.486634870302636,4.25406677238305,2.4390233720882,1.31752178539689,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,1.14734648299525,0.709336764396714,0,2.1349799145941,0,0,0.134710672069688,0.980771418680752,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.829288440122964,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,1.44331342025273,0.579652024875384,0.70445216541493,0,0,0,0,0,0.492434012174795,3.7440682422278,1.63494278517601,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,1.58744735730423,1.90994212779139,1.17217447210047,0,0.925447434329912,0,0.571652865261156,0.112131084345361,2.1798003441664,0.66004457238855,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.640695746278505,1.02341449813341,0.64341568457443,0,0.308419387605311,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,3.38807019827871,5.77566499444116,0,0,1.6068392984416,0.773365746336976,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,4.45160178233687,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0.921722292925374,0.223676107892416,0.166849141711909,0,0,0,0.811367035427949,0,0,0,0.146508179271894,0,0,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0,1.19548792950642,0.276283915531148,0,0,0,0,0,0,0,1.08507746200627,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0.438770794307945,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02944095638928,0.995261931078505,0,0.611030144933625,1.48260564340311,0.370691816839509,0.417687798021821,1.07841812769083,2.40773294189637,0.702793337176017,0,0,0,0.789168805698781,0,0.61214552326098,1.20054501294127,4.0587323241913,0.518440956986236,0,0,0,0,0,1.94144542218394,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0.264768380074501,1.58186518546373,0,0.794858446811959,1.07628353124994,0,0,1.28071796843612,0,0,0,0.171594997861965,0,0.49701014226173,0,0,0,0,0,0,0.821432273351958,0,0,0.262887354279314,5.02708322290058,6.18733144831546,0.717873024576814,2.1964690054889,3.86303443322914,2.4548860318606,24.2532335677082,0,0,0,0,0,0,2.79421995817089,0,0.136203406111576,0,0.137539436597234,0,5.39937339723601,1.5476039091159,0.607495566580247,0,0.157611414598396,1.10154635083496,0,0,0,4.2881719582402,3.31045985182716,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0.904980694530854,0.26446520348538,0,0,0.640724475406168,3.77290332239198,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0.785270481251171,0,0.366078794705889,0.500763722825999,0.573409195690071,0.221858103073705,1.24192805882767,0,0,2.42638588066636,0.570930667089935,0,0,0,0.74627401443437,0,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0.521745061811734,0,0.761610424337591,0.406870733204662,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,1.94860308839388,4.38453973034098,5.23409261618701,0,0,0,0,0,1.20550485762571,0,0,0,0,0,0,0.471797825567689,0,0.33946505990805,0,1.98297222814403,0,0.318004350653419,0,0,0.352675943690684,0,0.256916900385838,0,0.319267718114302,0.41023272848151,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.300841313397029,0,1.56302802246618,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.887821342714695,0,0,0.49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| ||
|short_description=p13@PSD3 | |short_description=p13@PSD3 | ||
}} | }} |
Latest revision as of 06:40, 17 September 2015
Short description: | p13@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PSD3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 49bp_to_ENST00000518303_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.28e-14 | 5 |
ciliated cell | 3.84e-09 | 3 |
ciliated epithelial cell | 3.84e-09 | 3 |
multi-ciliated epithelial cell | 3.84e-09 | 3 |
non-pigmented ciliary epithelial cell | 3.84e-09 | 3 |
conventional dendritic cell | 6.36e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.84e-09 | 3 |
ciliary body | 3.84e-09 | 3 |
primary circulatory organ | 2.94e-07 | 27 |
adult organism | 3.36e-07 | 114 |
atypical epithelium | 6.13e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system disease | 3.60e-07 | 4 |
heart disease | 7.46e-07 | 2 |