FFCP PHASE1:Hg19::chr10:51503053..51503066,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:51503053..51503066,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_at_chr10:51503053..51503066,- | |description=CAGE_peak_at_chr10:51503053..51503066,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000775!2.33e-09!3;CL:0000838!2.01e-08!52;CL:0000542!3.41e-08!53;CL:0000051!3.41e-08!53;CL:0000037!3.74e-08!172;CL:0000566!3.74e-08!172;CL:0002032!2.38e-07!165;CL:0000837!2.38e-07!165;CL:0000988!2.79e-07!182 | |ontology_enrichment_celltype=CL:0000775!2.33e-09!3;CL:0000838!2.01e-08!52;CL:0000542!3.41e-08!53;CL:0000051!3.41e-08!53;CL:0000037!3.74e-08!172;CL:0000566!3.74e-08!172;CL:0002032!2.38e-07!165;CL:0000837!2.38e-07!165;CL:0000988!2.79e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.04e-25;3!CL:0000094;5.96e-17;8!CL:0000081;2.18e-12;11!CL:0000037;1.31e-09;1!CL:0001024;1.31e-09;1 | |ontology_enrichment_celltype_v019=CL:0000775;1.04e-25;3!CL:0000094;5.96e-17;8!CL:0000081;2.18e-12;11!CL:0000037;1.31e-09;1!CL:0001024;1.31e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.04e-25,3;CL:0000094,5.96e-17,8;CL:0000081,2.18e-12,11;CL:0001024,1.25e-09,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.20e-14!15;UBERON:0000179!3.20e-14!15;UBERON:0000463!3.20e-14!15;UBERON:0004177!2.97e-09!7;UBERON:0007023!4.58e-09!115;UBERON:0002370!7.90e-07!4;UBERON:0005058!7.90e-07!4;UBERON:0009113!7.90e-07!4;UBERON:0003295!7.90e-07!4;UBERON:0005562!7.90e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!3.20e-14!15;UBERON:0000179!3.20e-14!15;UBERON:0000463!3.20e-14!15;UBERON:0004177!2.97e-09!7;UBERON:0007023!4.58e-09!115;UBERON:0002370!7.90e-07!4;UBERON:0005058!7.90e-07!4;UBERON:0009113!7.90e-07!4;UBERON:0003295!7.90e-07!4;UBERON:0005562!7.90e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.67e-36;15!UBERON:0000179;9.67e-36;15!UBERON:0000463;9.67e-36;15!UBERON:0002390;5.02e-27;32!UBERON:0002370;8.80e-18;2!UBERON:0005058;8.80e-18;2!UBERON:0009113;8.80e-18;2!UBERON:0002193;4.76e-15;42!UBERON:0002171;1.99e-09;1!UBERON:0006518;1.99e-09;1!UBERON:0008949;1.99e-09;1!UBERON:0000101;1.99e-09;1!UBERON:0002167;1.99e-09;1!UBERON:0004177;1.19e-07;5!UBERON:0005057;1.19e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;9.67e-36;15!UBERON:0000179;9.67e-36;15!UBERON:0000463;9.67e-36;15!UBERON:0002390;5.02e-27;32!UBERON:0002370;8.80e-18;2!UBERON:0005058;8.80e-18;2!UBERON:0009113;8.80e-18;2!UBERON:0002193;4.76e-15;42!UBERON:0002171;1.99e-09;1!UBERON:0006518;1.99e-09;1!UBERON:0008949;1.99e-09;1!UBERON:0000101;1.99e-09;1!UBERON:0002167;1.99e-09;1!UBERON:0004177;1.19e-07;5!UBERON:0005057;1.19e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.68e-36,15;UBERON:0000179,9.68e-36,15;UBERON:0000463,9.68e-36,15;UBERON:0002171,2.08e-09,1;UBERON:0006518,2.08e-09,1;UBERON:0008949,2.08e-09,1;UBERON:0000101,2.08e-09,1;UBERON:0002167,2.08e-09,1;UBERON:0002370,2.36e-09,4;UBERON:0005058,2.36e-09,4;UBERON:0009113,2.36e-09,4;UBERON:0003295,2.36e-09,4;UBERON:0005562,2.36e-09,4;UBERON:0002390,1.29e-08,98;UBERON:0003061,1.29e-08,98;UBERON:0002193,1.17e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,2.64240395401362,0,0,0.217010870715852,0,0,0,0.726991193897824,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0.946895611469467,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.889719378972363,0.535081656179426,0,0,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,2.24702107184155,5.9832291840805,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,41.1032563478057,42.0550463928306,25.0644762356632,25.2525681985256,20.5681136543097,49.2839716506465,41.5824206673348,19.0350042310625,0,0,0,0,0,0.142283686696828,0.159426272728822,0.399158742865633,0.383010740264733,0,0,0,0,1.56679895773023,5.01268954180134,0,0.1605880751037,0,0,0,0,0,0,1.17232857241224,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,1.88126918544609,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2628680491764,6.14539671528993,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,2.64240395401362,0,0,0.217010870715852,0,0,0,0.726991193897824,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,0,0,0.946895611469467,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.889719378972363,0.535081656179426,0,0,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,1.30139853857622,0,0,0,2.24702107184155,5.9832291840805,8.70272578215674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,41.1032563478057,42.0550463928306,25.0644762356632,25.2525681985256,20.5681136543097,49.2839716506465,41.5824206673348,19.0350042310625,0,0,0,0,0,0.142283686696828,0.159426272728822,0.399158742865633,0.383010740264733,0,0,0,0,1.56679895773023,5.01268954180134,0,0.1605880751037,0,0,0,0,0,0,1.17232857241224,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,1.88126918544609,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2628680491764,6.14539671528993,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr10:51503053..51503066,- | |short_description=p@chr10:51503053..51503066,- | ||
}} | }} |
Latest revision as of 14:03, 23 July 2015
Short description: | p@chr10:51503053..51503066, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:51503053..51503066, - |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.04e-25 | 3 |
granulocyte | 5.96e-17 | 8 |
blood cell | 2.18e-12 | 11 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.25e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 9.68e-36 | 15 |
haemolymphatic fluid | 9.68e-36 | 15 |
organism substance | 9.68e-36 | 15 |
lower lobe of right lung | 2.08e-09 | 1 |
right lung lobe | 2.08e-09 | 1 |
lower lobe of lung | 2.08e-09 | 1 |
lobe of lung | 2.08e-09 | 1 |
right lung | 2.08e-09 | 1 |
thymus | 2.36e-09 | 4 |
hemolymphoid system gland | 2.36e-09 | 4 |
thymic region | 2.36e-09 | 4 |
pharyngeal gland | 2.36e-09 | 4 |
thymus primordium | 2.36e-09 | 4 |
hematopoietic system | 1.29e-08 | 98 |
blood island | 1.29e-08 | 98 |
hemolymphoid system | 1.17e-07 | 108 |