FFCP PHASE1:Hg19::chr4:159094078..159094085,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51313 | |EntrezGene=51313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25312 | |HGNC=25312 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000503227_5end | |association_with_transcript=89bp_to_ENST00000503227_5end | ||
|cluster_id=chr4:159094078..159094085,- | |||
|description=CAGE_peak_13_at_FAM198B_5end | |description=CAGE_peak_13_at_FAM198B_5end | ||
|id=chr4:159094078..159094085,- | |id=chr4:159094078..159094085,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002494;6.24e-08;16 | |ontology_enrichment_celltype_v019=CL:0002494;6.24e-08;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.24e-08,16 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.88e-09;1!UBERON:0004140;2.70e-09;1!UBERON:0005062;5.64e-09;4!UBERON:0007284;5.64e-09;4!UBERON:0010226;6.71e-09;1 | |ontology_enrichment_development_v019=UBERON:0010227;1.88e-09;1!UBERON:0004140;2.70e-09;1!UBERON:0005062;5.64e-09;4!UBERON:0007284;5.64e-09;4!UBERON:0010226;6.71e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.80e-16;2!DOID:178;6.71e-09;1!DOID:326;6.71e-09;1!DOID:3978;6.71e-09;1!DOID:3394;6.71e-09;1!DOID:5844;6.71e-09;1!DOID:1287;1.09e-08;4 | |ontology_enrichment_disease_v019=DOID:114;1.80e-16;2!DOID:178;6.71e-09;1!DOID:326;6.71e-09;1!DOID:3978;6.71e-09;1!DOID:3394;6.71e-09;1!DOID:5844;6.71e-09;1!DOID:1287;1.09e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.27e-16,2;DOID:178,5.31e-09,1;DOID:326,5.31e-09,1;DOID:3978,5.31e-09,1;DOID:3394,5.31e-09,1;DOID:5844,5.31e-09,1;DOID:1287,9.20e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.43e-15!27;UBERON:0007023!4.47e-15!115;UBERON:0004872!1.63e-14!84;UBERON:0003914!3.31e-12!118;UBERON:0001009!1.18e-11!113;UBERON:0000948!1.65e-11!24;UBERON:0005498!1.65e-11!24;UBERON:0004140!1.65e-11!24;UBERON:0009881!1.65e-11!24;UBERON:0004141!1.65e-11!24;UBERON:0003084!1.65e-11!24;UBERON:0007005!1.65e-11!24;UBERON:0004139!1.65e-11!24;UBERON:0004291!1.65e-11!24;UBERON:0000025!5.52e-11!194;UBERON:0004111!5.68e-11!241;UBERON:0004535!1.22e-09!110;UBERON:0003103!1.80e-09!69;UBERON:0000477!3.37e-08!286;UBERON:0000055!5.67e-08!69;UBERON:0001981!1.33e-07!60;UBERON:0007500!1.33e-07!60;UBERON:0004537!1.33e-07!60;UBERON:0006965!1.33e-07!60;UBERON:0000468!1.57e-07!659;UBERON:0000483!1.91e-07!309;UBERON:0002066!2.20e-07!5;UBERON:0000119!3.31e-07!312;UBERON:0001638!5.18e-07!9;UBERON:0003920!5.18e-07!9;UBERON:0004582!5.18e-07!9;UBERON:0000467!5.92e-07!625;UBERON:0000480!6.79e-07!626;UBERON:0002049!7.88e-07!79;UBERON:0007798!7.88e-07!79;UBERON:0000922!8.81e-07!612 | |ontology_enrichment_uberon=UBERON:0007100!3.43e-15!27;UBERON:0007023!4.47e-15!115;UBERON:0004872!1.63e-14!84;UBERON:0003914!3.31e-12!118;UBERON:0001009!1.18e-11!113;UBERON:0000948!1.65e-11!24;UBERON:0005498!1.65e-11!24;UBERON:0004140!1.65e-11!24;UBERON:0009881!1.65e-11!24;UBERON:0004141!1.65e-11!24;UBERON:0003084!1.65e-11!24;UBERON:0007005!1.65e-11!24;UBERON:0004139!1.65e-11!24;UBERON:0004291!1.65e-11!24;UBERON:0000025!5.52e-11!194;UBERON:0004111!5.68e-11!241;UBERON:0004535!1.22e-09!110;UBERON:0003103!1.80e-09!69;UBERON:0000477!3.37e-08!286;UBERON:0000055!5.67e-08!69;UBERON:0001981!1.33e-07!60;UBERON:0007500!1.33e-07!60;UBERON:0004537!1.33e-07!60;UBERON:0006965!1.33e-07!60;UBERON:0000468!1.57e-07!659;UBERON:0000483!1.91e-07!309;UBERON:0002066!2.20e-07!5;UBERON:0000119!3.31e-07!312;UBERON:0001638!5.18e-07!9;UBERON:0003920!5.18e-07!9;UBERON:0004582!5.18e-07!9;UBERON:0000467!5.92e-07!625;UBERON:0000480!6.79e-07!626;UBERON:0002049!7.88e-07!79;UBERON:0007798!7.88e-07!79;UBERON:0000922!8.81e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.45e-43;25!UBERON:0000948;2.06e-27;22!UBERON:0003978;1.11e-11;3!UBERON:0000946;1.11e-11;3!UBERON:0004151;2.14e-11;3!UBERON:0002146;1.74e-09;1!UBERON:0005623;1.74e-09;1!UBERON:0002079;1.88e-09;1!UBERON:0002135;2.70e-09;1!UBERON:0002084;6.71e-09;1!UBERON:0002082;6.71e-09;1!UBERON:0003103;7.67e-08;61 | |ontology_enrichment_uberon_v019=UBERON:0007100;9.45e-43;25!UBERON:0000948;2.06e-27;22!UBERON:0003978;1.11e-11;3!UBERON:0000946;1.11e-11;3!UBERON:0004151;2.14e-11;3!UBERON:0002146;1.74e-09;1!UBERON:0005623;1.74e-09;1!UBERON:0002079;1.88e-09;1!UBERON:0002135;2.70e-09;1!UBERON:0002084;6.71e-09;1!UBERON:0002082;6.71e-09;1!UBERON:0003103;7.67e-08;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.30e-39,27;UBERON:0000948,3.73e-25,24;UBERON:0005498,3.73e-25,24;UBERON:0004140,3.73e-25,24;UBERON:0009881,3.73e-25,24;UBERON:0004141,3.73e-25,24;UBERON:0003084,3.73e-25,24;UBERON:0007005,3.73e-25,24;UBERON:0004139,3.73e-25,24;UBERON:0004291,3.73e-25,24;UBERON:0001009,6.91e-15,112;UBERON:0003103,1.83e-14,68;UBERON:0004872,1.47e-13,83;UBERON:0003914,3.78e-12,117;UBERON:0003978,1.09e-11,3;UBERON:0009751,1.09e-11,3;UBERON:0000946,1.09e-11,3;UBERON:0002523,1.09e-11,3;UBERON:0005983,1.09e-11,3;UBERON:0002165,1.09e-11,3;UBERON:0002062,1.09e-11,3;UBERON:0007280,1.09e-11,3;UBERON:0004151,1.49e-11,3;UBERON:0004797,7.67e-11,7;UBERON:0004535,9.17e-10,109;UBERON:0002146,1.74e-09,1;UBERON:0005623,1.74e-09,1;UBERON:0002079,1.89e-09,1;UBERON:0002135,2.60e-09,1;UBERON:0002084,3.88e-09,1;UBERON:0002082,3.88e-09,1;UBERON:0010226,3.88e-09,1;UBERON:0000025,2.71e-07,192 | |||
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| ||
|short_description=p13@FAM198B | |short_description=p13@FAM198B | ||
}} | }} |
Latest revision as of 10:20, 16 September 2015
Short description: | p13@FAM198B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FAM198B_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000503227_5end |
EntrezGene: | FAM198B |
HGNC: | 25312 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.24e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.30e-39 | 27 |
heart | 3.73e-25 | 24 |
primitive heart tube | 3.73e-25 | 24 |
primary heart field | 3.73e-25 | 24 |
anterior lateral plate mesoderm | 3.73e-25 | 24 |
heart tube | 3.73e-25 | 24 |
heart primordium | 3.73e-25 | 24 |
cardiac mesoderm | 3.73e-25 | 24 |
cardiogenic plate | 3.73e-25 | 24 |
heart rudiment | 3.73e-25 | 24 |
circulatory system | 6.91e-15 | 112 |
compound organ | 1.83e-14 | 68 |
splanchnic layer of lateral plate mesoderm | 1.47e-13 | 83 |
epithelial tube | 3.78e-12 | 117 |
valve | 1.09e-11 | 3 |
cardiac mesenchyme | 1.09e-11 | 3 |
cardial valve | 1.09e-11 | 3 |
tunica intima | 1.09e-11 | 3 |
heart layer | 1.09e-11 | 3 |
endocardium | 1.09e-11 | 3 |
endocardial cushion | 1.09e-11 | 3 |
presumptive endocardium | 1.09e-11 | 3 |
cardiac chamber | 1.49e-11 | 3 |
blood vessel layer | 7.67e-11 | 7 |
cardiovascular system | 9.17e-10 | 109 |
pulmonary valve | 1.74e-09 | 1 |
semi-lunar valve | 1.74e-09 | 1 |
left cardiac atrium | 1.89e-09 | 1 |
mitral valve | 2.60e-09 | 1 |
heart left ventricle | 3.88e-09 | 1 |
cardiac ventricle | 3.88e-09 | 1 |
future cardiac ventricle | 3.88e-09 | 1 |
tube | 2.71e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.27e-16 | 2 |
vascular disease | 5.31e-09 | 1 |
ischemia | 5.31e-09 | 1 |
extrinsic cardiomyopathy | 5.31e-09 | 1 |
myocardial ischemia | 5.31e-09 | 1 |
myocardial infarction | 5.31e-09 | 1 |
cardiovascular system disease | 9.20e-09 | 4 |