FFCP PHASE1:Hg19::chr7:112758720..112758727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:112758720..112758727,+ | |||
|coexpression_cluster_id=C1125 | |coexpression_cluster_id=C1125 | ||
|description=CAGE_peak_at_chr7:112758720..112758727,+ | |description=CAGE_peak_at_chr7:112758720..112758727,+ | ||
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|ontology_enrichment_celltype=CL:0002057!9.46e-28!42;CL:0002031!1.24e-26!124;CL:0000860!3.44e-26!45;CL:0000738!4.28e-26!140;CL:0000839!2.11e-25!70;CL:0000557!8.98e-25!71;CL:0000037!1.69e-24!172;CL:0000566!1.69e-24!172;CL:0002032!5.94e-24!165;CL:0000837!5.94e-24!165;CL:0000988!7.03e-24!182;CL:0002087!2.20e-23!119;CL:0000766!4.55e-23!76;CL:0002194!5.03e-23!63;CL:0000576!5.03e-23!63;CL:0000040!5.03e-23!63;CL:0000559!5.03e-23!63;CL:0002009!8.66e-22!65;CL:0000763!1.03e-19!112;CL:0000049!1.03e-19!112;CL:0000134!4.76e-10!358;CL:0002320!1.15e-09!365;CL:0000219!6.63e-09!390;CL:0000034!4.10e-08!444;CL:0000048!1.01e-07!430;CL:0000723!3.63e-07!436 | |ontology_enrichment_celltype=CL:0002057!9.46e-28!42;CL:0002031!1.24e-26!124;CL:0000860!3.44e-26!45;CL:0000738!4.28e-26!140;CL:0000839!2.11e-25!70;CL:0000557!8.98e-25!71;CL:0000037!1.69e-24!172;CL:0000566!1.69e-24!172;CL:0002032!5.94e-24!165;CL:0000837!5.94e-24!165;CL:0000988!7.03e-24!182;CL:0002087!2.20e-23!119;CL:0000766!4.55e-23!76;CL:0002194!5.03e-23!63;CL:0000576!5.03e-23!63;CL:0000040!5.03e-23!63;CL:0000559!5.03e-23!63;CL:0002009!8.66e-22!65;CL:0000763!1.03e-19!112;CL:0000049!1.03e-19!112;CL:0000134!4.76e-10!358;CL:0002320!1.15e-09!365;CL:0000219!6.63e-09!390;CL:0000034!4.10e-08!444;CL:0000048!1.01e-07!430;CL:0000723!3.63e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-81;33!CL:0002057;1.71e-81;33!CL:0000473;1.37e-55;39!CL:0000234;1.37e-55;39!CL:0000576;3.49e-37;48!CL:0000766;5.47e-23;69!CL:0002087;2.92e-12;104!CL:0000763;5.95e-10;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.71e-81;33!CL:0002057;1.71e-81;33!CL:0000473;1.37e-55;39!CL:0000234;1.37e-55;39!CL:0000576;3.49e-37;48!CL:0000766;5.47e-23;69!CL:0002087;2.92e-12;104!CL:0000763;5.95e-10;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.85e-69,42;CL:0002057,6.85e-69,42;CL:0000473,8.46e-60,48;CL:0000234,8.46e-60,48;CL:0002194,4.60e-47,59;CL:0000576,4.60e-47,59;CL:0000040,4.60e-47,59;CL:0000559,4.60e-47,59;CL:0002009,2.03e-45,61;CL:0000839,9.72e-42,66;CL:0000557,4.56e-41,67;CL:0000766,5.51e-38,72;CL:0002087,6.40e-25,115;CL:0000763,3.97e-24,108;CL:0000049,3.97e-24,108;CL:0002031,1.02e-23,120;CL:0000738,1.41e-22,136;CL:0000037,1.73e-17,168;CL:0002032,1.17e-16,161;CL:0000837,1.17e-16,161;CL:0000988,2.19e-16,177;CL:0000134,8.35e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-52;42!CL:0000049;1.78e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.78e-52;42!CL:0000049;1.78e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.00e-23!80;UBERON:0001474!7.81e-21!86;UBERON:0002390!4.15e-20!102;UBERON:0003061!4.15e-20!102;UBERON:0002193!7.79e-19!112;UBERON:0004765!9.20e-19!101;UBERON:0001434!9.20e-19!101;UBERON:0002405!3.23e-17!115;UBERON:0002384!6.71e-09!375;UBERON:0002204!9.02e-09!167 | |ontology_enrichment_uberon=UBERON:0002371!5.00e-23!80;UBERON:0001474!7.81e-21!86;UBERON:0002390!4.15e-20!102;UBERON:0003061!4.15e-20!102;UBERON:0002193!7.79e-19!112;UBERON:0004765!9.20e-19!101;UBERON:0001434!9.20e-19!101;UBERON:0002405!3.23e-17!115;UBERON:0002384!6.71e-09!375;UBERON:0002204!9.02e-09!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.30e-36,76;UBERON:0001474,6.21e-33,82;UBERON:0002405,9.75e-32,93;UBERON:0002390,6.30e-30,98;UBERON:0003061,6.30e-30,98;UBERON:0004765,1.09e-29,90;UBERON:0002193,8.37e-27,108;UBERON:0001434,2.35e-26,100;UBERON:0002204,3.08e-14,167;UBERON:0003081,9.04e-14,203;UBERON:0000926,3.16e-08,315;UBERON:0004120,3.16e-08,315;UBERON:0006603,3.16e-08,315 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,1.58260186937072,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0.0764134057479513,0,0.314843125254717,0,0,0.309632246632152,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.601633342410425,0.217010870715852,0.447830948479849,0,0,0.436194716338694,1.13362783106643,0.970336244751265,0.929716147622738,2.05583944010913,2.78735733805593,2.3015391385772,1.2808035326455,2.60130452877444,1.37898272294647,1.29096936716765,5.41705946377367,0.188242339542605,1.09162460023138,0.674170453335254,0.612167784741805,2.24650318953266,1.91801137739712,0.659702600373432,0.398927315243264,0.852449501065388,2.03146467040009,3.40431134814684,3.11411124497787,1.7587406567972,2.08593167368081,1.73751075764093,1.81619850790011,6.99727508376373,5.06339819905415,0.211255286311942,0.850417199860174,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,2.64342657158052,0,0,0.196709770113833,0,0.822405995998037,0.167186495390678,0,0,0,0,0.589211814949674,0.221533894583621,0,0,0,0.164437904603676,0.552700035571697,0,0.296573126324121,0,1.04535523804977,0,0.383220493601921,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0.821127996921047,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0.953962497221368,0.571994910780128,1.11437250398869,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,1.71697232418975,0,0,0.445893486866185,0,0,0.141775097242386,0,0,0,0.985326475791887,0.176096868026452,0.414656231081544,0.576479813667846,0.75745460055828,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0.394061520403854,0.215627574859517,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.391602314925481,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.246381468041427,0,0,0.241718899183244,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0.296964680832639,0,0.994147647766298,0,0,2.80166586185491,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.482385754501632,0,0.442317039724898,0,0,0,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0.194860308839388,0.132864840313363,0.490696182767533,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.471797825567689,0.109209638192014,0.169732529954025,0,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0.319267718114302,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,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| ||
|short_description=p@chr7:112758720..112758727,+ | |short_description=p@chr7:112758720..112758727,+ | ||
}} | }} |
Latest revision as of 05:09, 31 July 2015
Short description: | p@chr7:112758720..112758727, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:112758720..112758727, + |
Coexpression cluster: | C1125_anaplastic_CD14_CD14CD16_acute_Macrophage_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.85e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.85e-69 | 42 |
defensive cell | 8.46e-60 | 48 |
phagocyte | 8.46e-60 | 48 |
monopoietic cell | 4.60e-47 | 59 |
monocyte | 4.60e-47 | 59 |
monoblast | 4.60e-47 | 59 |
promonocyte | 4.60e-47 | 59 |
macrophage dendritic cell progenitor | 2.03e-45 | 61 |
myeloid lineage restricted progenitor cell | 9.72e-42 | 66 |
granulocyte monocyte progenitor cell | 4.56e-41 | 67 |
myeloid leukocyte | 5.51e-38 | 72 |
nongranular leukocyte | 6.40e-25 | 115 |
myeloid cell | 3.97e-24 | 108 |
common myeloid progenitor | 3.97e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 1.02e-23 | 120 |
leukocyte | 1.41e-22 | 136 |
hematopoietic stem cell | 1.73e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.17e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-16 | 161 |
hematopoietic cell | 2.19e-16 | 177 |
mesenchymal cell | 8.35e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.30e-36 | 76 |
bone element | 6.21e-33 | 82 |
immune system | 9.75e-32 | 93 |
hematopoietic system | 6.30e-30 | 98 |
blood island | 6.30e-30 | 98 |
skeletal element | 1.09e-29 | 90 |
hemolymphoid system | 8.37e-27 | 108 |
skeletal system | 2.35e-26 | 100 |
musculoskeletal system | 3.08e-14 | 167 |
lateral plate mesoderm | 9.04e-14 | 203 |
mesoderm | 3.16e-08 | 315 |
mesoderm-derived structure | 3.16e-08 | 315 |
presumptive mesoderm | 3.16e-08 | 315 |