FFCP PHASE1:Hg19::chr22:30805086..30805113,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:30805086..30805113,+
|short_description=p3@SEC14L2
|description=CAGE_peak_3_at_SEC14L2_5end
|association_with_transcript=0bp_to_ENST00000478762,uc003aht.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23541 | |EntrezGene=23541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10699 | |HGNC=10699 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478762,uc003aht.2_5end | |||
|cluster_id=chr22:30805086..30805113,+ | |||
|description=CAGE_peak_3_at_SEC14L2_5end | |||
|id=chr22:30805086..30805113,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.74e-08!13;CL:0000057!3.57e-08!75;CL:0000055!2.43e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.30e-21;19!CL:0002577;4.04e-21;3!CL:0002536;1.03e-14;2!CL:0000342;1.07e-07;1!CL:0002565;1.07e-07;1!CL:0002591;1.07e-07;1!CL:0002327;1.75e-07;4!CL:0002202;6.75e-07;9!CL:0002632;6.75e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.71e-21,19;CL:0002577,4.06e-21,3;CL:0002536,1.03e-14,2;CL:0000342,1.35e-07,1;CL:0002565,1.35e-07,1;CL:0002591,1.64e-07,1;CL:0002327,1.81e-07,4;CL:0002202,6.03e-07,9;CL:0002632,6.03e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.06e-09!365;UBERON:0003102!4.39e-09!95;UBERON:0000914!1.15e-08!83;UBERON:0002329!1.15e-08!83;UBERON:0003077!1.15e-08!83;UBERON:0003059!1.15e-08!83;UBERON:0007282!1.15e-08!83;UBERON:0009618!1.15e-08!83;UBERON:0007285!1.15e-08!83;UBERON:0002100!1.24e-08!216;UBERON:0005256!5.60e-08!143;UBERON:0000467!7.60e-07!625;UBERON:0000480!8.99e-07!626;UBERON:0000468!9.96e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-16;24!UBERON:0005631;2.15e-16;10!UBERON:0000158;2.15e-16;10!UBERON:0001987;5.55e-16;4!UBERON:0000305;1.70e-15;7!UBERON:0006947;7.97e-10;3!UBERON:0004054;7.97e-10;3!UBERON:0001301;2.70e-08;1!UBERON:0001000;1.07e-07;1!UBERON:0002506;1.07e-07;1!UBERON:0005352;1.07e-07;1!UBERON:0001769;1.07e-07;1!UBERON:0005904;1.42e-07;4!UBERON:0001911;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.42e-29,14;UBERON:0000158,1.42e-29,14;UBERON:0000478,8.99e-17,24;UBERON:0001987,5.57e-16,4;UBERON:0004340,5.57e-16,4;UBERON:0000305,1.25e-15,7;UBERON:0003124,1.34e-15,7;UBERON:0004871,1.07e-13,8;UBERON:0006947,7.47e-10,3;UBERON:0004054,7.47e-10,3;UBERON:0001301,2.70e-08,1;UBERON:0001000,9.72e-08,1;UBERON:0005352,9.72e-08,1;UBERON:0002506,1.35e-07,1;UBERON:0001769,1.35e-07,1;UBERON:0005904,1.35e-07,4;UBERON:0001911,1.81e-07,4;UBERON:0005333,1.81e-07,4;UBERON:0008425,1.81e-07,4;UBERON:0005311,1.81e-07,4 | |||
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| ||
|short_description=p3@SEC14L2 | |||
}} | }} |
Latest revision as of 17:59, 19 September 2015
Short description: | p3@SEC14L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEC14L2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478762, uc003aht.2_5end |
EntrezGene: | SEC14L2 |
HGNC: | 10699 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.71e-21 | 19 |
placental epithelial cell | 4.06e-21 | 3 |
amniotic epithelial cell | 1.03e-14 | 2 |
pigment cell (sensu Vertebrata) | 1.35e-07 | 1 |
iris pigment epithelial cell | 1.35e-07 | 1 |
smooth muscle cell of the pulmonary artery | 1.64e-07 | 1 |
mammary gland epithelial cell | 1.81e-07 | 4 |
epithelial cell of tracheobronchial tree | 6.03e-07 | 9 |
epithelial cell of lower respiratory tract | 6.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.42e-29 | 14 |
membranous layer | 1.42e-29 | 14 |
extraembryonic structure | 8.99e-17 | 24 |
placenta | 5.57e-16 | 4 |
allantois | 5.57e-16 | 4 |
amnion | 1.25e-15 | 7 |
chorion | 1.34e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.07e-13 | 8 |
male genital duct | 7.47e-10 | 3 |
internal male genitalia | 7.47e-10 | 3 |
epididymis | 2.70e-08 | 1 |
vas deferens | 9.72e-08 | 1 |
spermatic cord | 9.72e-08 | 1 |
iris epithelium | 1.35e-07 | 1 |
iris | 1.35e-07 | 1 |
duct of male reproductive system | 1.35e-07 | 4 |
mammary gland | 1.81e-07 | 4 |
mammary bud | 1.81e-07 | 4 |
mammary ridge | 1.81e-07 | 4 |
mammary placode | 1.81e-07 | 4 |