FFCP PHASE1:Hg19::chrX:19002165..19002177,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5256 | |EntrezGene=5256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8926 | |HGNC=8926 | ||
|TSSclassifier=strong | |||
|UniProt=P46019 | |UniProt=P46019 | ||
|association_with_transcript=302bp_to_NM_000292,uc004cyv.3_5end | |association_with_transcript=302bp_to_NM_000292,uc004cyv.3_5end | ||
|cluster_id=chrX:19002165..19002177,- | |||
|coexpression_cluster_id=C4867 | |coexpression_cluster_id=C4867 | ||
|description=CAGE_peak_11_at_PHKA2_5end | |description=CAGE_peak_11_at_PHKA2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.56e-15;12!CL:0000775;1.38e-07;3 | |ontology_enrichment_celltype_v019=CL:0000182;2.56e-15;12!CL:0000775;1.38e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.44e-15,12;CL:0000775,1.29e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;9.05e-12;31!UBERON:0004161;9.12e-12;11!UBERON:0009497;6.52e-10;13 | |ontology_enrichment_development_v019=UBERON:0003104;9.05e-12;31!UBERON:0004161;9.12e-12;11!UBERON:0009497;6.52e-10;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.08e-16;19!UBERON:0006925;1.08e-16;19!UBERON:0002423;2.25e-12;25!UBERON:0002365;6.31e-12;31!UBERON:0002330;6.31e-12;31!UBERON:0002368;2.62e-08;33!UBERON:0003978;2.12e-07;3!UBERON:0000946;2.12e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.08e-16;19!UBERON:0006925;1.08e-16;19!UBERON:0002423;2.25e-12;25!UBERON:0002365;6.31e-12;31!UBERON:0002330;6.31e-12;31!UBERON:0002368;2.62e-08;33!UBERON:0003978;2.12e-07;3!UBERON:0000946;2.12e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.05e-16,19;UBERON:0006925,1.05e-16,19;UBERON:0008836,1.05e-16,19;UBERON:0008835,2.99e-14,22;UBERON:0003894,2.99e-14,22;UBERON:0009854,1.42e-13,23;UBERON:0007499,2.20e-12,25;UBERON:0009497,2.20e-12,25;UBERON:0000015,2.20e-12,25;UBERON:0002423,2.20e-12,25;UBERON:0006235,2.20e-12,25;UBERON:0004161,2.20e-12,25;UBERON:0002365,3.00e-12,31;UBERON:0002330,3.00e-12,31;UBERON:0009856,7.39e-12,26;UBERON:0002368,1.78e-08,35;UBERON:0005172,7.05e-08,54;UBERON:0005173,7.05e-08,54;UBERON:0003978,2.20e-07,3;UBERON:0009751,2.20e-07,3;UBERON:0000946,2.20e-07,3;UBERON:0002523,2.20e-07,3;UBERON:0005983,2.20e-07,3;UBERON:0002165,2.20e-07,3;UBERON:0002062,2.20e-07,3;UBERON:0007280,2.20e-07,3;UBERON:0002417,6.56e-07,60;UBERON:0000916,6.56e-07,60 | |||
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| ||
|short_description=p11@PHKA2 | |short_description=p11@PHKA2 | ||
}} | }} |
Latest revision as of 07:26, 20 September 2015
Short description: | p11@PHKA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PHKA2_5end |
Coexpression cluster: | C4867_Hepatocyte_liver_Eosinophils_colon_mature_Neutrophils_renal |
Association with transcript: | 302bp_to_NM_000292, uc004cyv.3_5end |
EntrezGene: | PHKA2 |
HGNC: | 8926 |
UniProt: | P46019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.44e-15 | 12 |
neutrophil | 1.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.05e-16 | 19 |
digestive gland | 1.05e-16 | 19 |
liver bud | 1.05e-16 | 19 |
hepatic diverticulum | 2.99e-14 | 22 |
liver primordium | 2.99e-14 | 22 |
digestive tract diverticulum | 1.42e-13 | 23 |
epithelial sac | 2.20e-12 | 25 |
epithelium of foregut-midgut junction | 2.20e-12 | 25 |
anatomical boundary | 2.20e-12 | 25 |
hepatobiliary system | 2.20e-12 | 25 |
foregut-midgut junction | 2.20e-12 | 25 |
septum transversum | 2.20e-12 | 25 |
exocrine gland | 3.00e-12 | 31 |
exocrine system | 3.00e-12 | 31 |
sac | 7.39e-12 | 26 |
endocrine gland | 1.78e-08 | 35 |
abdomen element | 7.05e-08 | 54 |
abdominal segment element | 7.05e-08 | 54 |
valve | 2.20e-07 | 3 |
cardiac mesenchyme | 2.20e-07 | 3 |
cardial valve | 2.20e-07 | 3 |
tunica intima | 2.20e-07 | 3 |
heart layer | 2.20e-07 | 3 |
endocardium | 2.20e-07 | 3 |
endocardial cushion | 2.20e-07 | 3 |
presumptive endocardium | 2.20e-07 | 3 |
abdominal segment of trunk | 6.56e-07 | 60 |
abdomen | 6.56e-07 | 60 |