FFCP PHASE1:Hg19::chr5:95053375..95053385,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000504949,uc003klk.1_5end | |association_with_transcript=38bp_to_ENST00000504949,uc003klk.1_5end | ||
|cluster_id=chr5:95053375..95053385,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_30_at_RHOBTB3_5end | |description=CAGE_peak_30_at_RHOBTB3_5end | ||
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|ontology_enrichment_celltype=CL:0002594!5.00e-17!4;CL:0002541!1.41e-10!3;CL:0002568!2.46e-08!1;CL:1001319!3.53e-08!1;CL:1000600!3.53e-08!1 | |ontology_enrichment_celltype=CL:0002594!5.00e-17!4;CL:0002541!1.41e-10!3;CL:0002568!2.46e-08!1;CL:1001319!3.53e-08!1;CL:1000600!3.53e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002589;4.66e-21;2 | |ontology_enrichment_celltype_v019=CL:0002589;4.66e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002589,5.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | |ontology_enrichment_development_v019=UBERON:0003124;6.62e-41;1!UBERON:0004872;5.08e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;2.97e-09;5 | |ontology_enrichment_disease_v019=DOID:4362;2.97e-09;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,2.74e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001310!5.00e-17!4;UBERON:0000476!1.41e-10!3;UBERON:0000920!1.41e-10!3;UBERON:0003124!5.21e-10!7;UBERON:0005631!1.61e-08!14;UBERON:0000158!1.61e-08!14;UBERON:0001282!2.13e-08!1;UBERON:0009842!2.13e-08!1;UBERON:0003704!2.13e-08!1;UBERON:0001171!2.13e-08!1;UBERON:0001172!2.13e-08!1;UBERON:0004645!3.53e-08!1;UBERON:0001256!3.53e-08!1;UBERON:0001259!3.53e-08!1;UBERON:0000478!2.32e-07!24 | |ontology_enrichment_uberon=UBERON:0001310!5.00e-17!4;UBERON:0000476!1.41e-10!3;UBERON:0000920!1.41e-10!3;UBERON:0003124!5.21e-10!7;UBERON:0005631!1.61e-08!14;UBERON:0000158!1.61e-08!14;UBERON:0001282!2.13e-08!1;UBERON:0009842!2.13e-08!1;UBERON:0003704!2.13e-08!1;UBERON:0001171!2.13e-08!1;UBERON:0001172!2.13e-08!1;UBERON:0004645!3.53e-08!1;UBERON:0001256!3.53e-08!1;UBERON:0001259!3.53e-08!1;UBERON:0000478!2.32e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;4.66e-21;2!UBERON:0007204;4.66e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0001529;4.66e-21;2!UBERON:0007204;4.66e-21;2!UBERON:0001987;2.53e-11;4!UBERON:0000002;6.34e-08;6!UBERON:0001560;6.34e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.70e-21,2;UBERON:0007204,5.70e-21,2;UBERON:0001987,2.53e-11,4;UBERON:0004340,2.53e-11,4;UBERON:0000995,1.27e-08,21;UBERON:0005795,2.82e-08,22;UBERON:0003975,2.82e-08,22;UBERON:0000002,5.92e-08,6;UBERON:0001560,5.92e-08,6;UBERON:0004175,2.14e-07,25;UBERON:0003124,5.08e-07,7 | |||
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|short_description=p30@RHOBTB3 | |short_description=p30@RHOBTB3 | ||
}} | }} |
Latest revision as of 07:43, 19 September 2015
Short description: | p30@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_RHOBTB3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 38bp_to_ENST00000504949, uc003klk.1_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 5.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.70e-21 | 2 |
brachiocephalic vasculature | 5.70e-21 | 2 |
placenta | 2.53e-11 | 4 |
allantois | 2.53e-11 | 4 |
uterus | 1.27e-08 | 21 |
embryonic uterus | 2.82e-08 | 22 |
internal female genitalia | 2.82e-08 | 22 |
uterine cervix | 5.92e-08 | 6 |
neck of organ | 5.92e-08 | 6 |
internal genitalia | 2.14e-07 | 25 |
chorion | 5.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.74e-09 | 5 |