FFCP PHASE1:Hg19::chr6:11112088..11112110,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=405754 | |EntrezGene=405754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33823 | |HGNC=33823 | ||
|TSSclassifier=strong | |||
|UniProt=P60508 | |UniProt=P60508 | ||
|association_with_transcript=-17bp_to_NM_207582_5end | |association_with_transcript=-17bp_to_NM_207582_5end | ||
|cluster_id=chr6:11112088..11112110,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_3_at_ERVFRD-1_5end | |description=CAGE_peak_3_at_ERVFRD-1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002274!9.83e-20!5;CL:0000457!9.83e-20!5;CL:0002191!9.83e-20!5;CL:0000097!9.83e-20!5;CL:0000831!9.83e-20!5;CL:0002028!9.83e-20!5;CL:0000163!3.06e-15!9 | |ontology_enrichment_celltype=CL:0002274!9.83e-20!5;CL:0000457!9.83e-20!5;CL:0002191!9.83e-20!5;CL:0000097!9.83e-20!5;CL:0000831!9.83e-20!5;CL:0002028!9.83e-20!5;CL:0000163!3.06e-15!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.29e-99;5!CL:0000163;4.04e-79;9!CL:0000151;2.50e-18;36!CL:0002097;3.70e-11;2!CL:0000174;7.26e-08;3!CL:0002586;7.26e-08;3 | |ontology_enrichment_celltype_v019=CL:0000097;2.29e-99;5!CL:0000163;4.04e-79;9!CL:0000151;2.50e-18;36!CL:0002097;3.70e-11;2!CL:0000174;7.26e-08;3!CL:0002586;7.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.30e-99,5;CL:0002028,2.30e-99,5;CL:0000163,4.04e-79,9;CL:0000151,6.76e-20,36;CL:0002097,3.70e-11,2;CL:0002586,6.34e-08,3;CL:0000174,7.26e-08,3;CL:0000839,1.34e-07,66;CL:0000557,1.73e-07,67;CL:0000766,5.60e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.31e-21;1 | |ontology_enrichment_development_v019=UBERON:0003124;6.31e-21;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!4.18e-07!5;UBERON:0005388!4.18e-07!5;UBERON:0001802!4.18e-07!5 | |ontology_enrichment_uberon=UBERON:0000966!4.18e-07!5;UBERON:0005388!4.18e-07!5;UBERON:0001802!4.18e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;7.26e-08;3!UBERON:0001235;7.26e-08;3!UBERON:0001781;7.26e-08;3!UBERON:0006858;7.26e-08;3!UBERON:0001782;7.26e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002369;7.26e-08;3!UBERON:0001235;7.26e-08;3!UBERON:0001781;7.26e-08;3!UBERON:0006858;7.26e-08;3!UBERON:0001782;7.26e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,6.34e-08,3;UBERON:0005424,6.34e-08,3;UBERON:0002369,7.26e-08,3;UBERON:0001235,7.26e-08,3;UBERON:0006858,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,131.541084518217,22.3643022393594,13.683655625691,14.988475155364,14.6441222774601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.984043937099117,1.95227036798582,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.269272933229316,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,131.541084518217,22.3643022393594,13.683655625691,14.988475155364,14.6441222774601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.984043937099117,1.95227036798582,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,1.4098700508785,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.269272933229316,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p3@ERVFRD-1 | |short_description=p3@ERVFRD-1 | ||
}} | }} |
Latest revision as of 19:58, 19 September 2015
Short description: | p3@ERVFRD-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ERVFRD-1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -17bp_to_NM_207582_5end |
EntrezGene: | ERVFRD-1 |
HGNC: | 33823 |
UniProt: | P60508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.30e-99 | 5 |
basophil mast progenitor cell | 2.30e-99 | 5 |
endocrine cell | 4.04e-79 | 9 |
secretory cell | 6.76e-20 | 36 |
cortical cell of adrenal gland | 3.70e-11 | 2 |
retinal pigment epithelial cell | 6.34e-08 | 3 |
steroid hormone secreting cell | 7.26e-08 | 3 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 66 |
granulocyte monocyte progenitor cell | 1.73e-07 | 67 |
myeloid leukocyte | 5.60e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 6.34e-08 | 3 |
presumptive retinal pigmented epithelium | 6.34e-08 | 3 |
adrenal gland | 7.26e-08 | 3 |
adrenal cortex | 7.26e-08 | 3 |
adrenal/interrenal gland | 7.26e-08 | 3 |