FFCP PHASE1:Hg19::chr16:66413188..66413195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1003 | |EntrezGene=1003 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1764 | |HGNC=1764 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc002eon.1_5end | |association_with_transcript=-11bp_to_uc002eon.1_5end | ||
|cluster_id=chr16:66413188..66413195,+ | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_9_at_CDH5_5end | |description=CAGE_peak_9_at_CDH5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!6.34e-29!7;CL:0000586!6.34e-29!7;CL:0000083!1.72e-13!4 | |ontology_enrichment_celltype=CL:0000039!6.34e-29!7;CL:0000586!6.34e-29!7;CL:0000083!1.72e-13!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.85e-51;7!CL:0000586;3.85e-51;7!CL:0000083;2.94e-11;4 | |ontology_enrichment_celltype_v019=CL:0000039;3.85e-51;7!CL:0000586;3.85e-51;7!CL:0000083;2.94e-11;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.85e-51,7;CL:0000586,3.85e-51,7;CL:0000083,2.80e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.21e-40;1!UBERON:0004872;5.54e-07;7 | |ontology_enrichment_development_v019=UBERON:0003124;1.21e-40;1!UBERON:0004872;5.54e-07;7 | ||
|ontology_enrichment_disease=DOID:1799!3.50e-14!1;DOID:10165!3.50e-14!1;DOID:1798!3.50e-14!1;DOID:1793!1.72e-13!4;DOID:0050687!5.39e-11!143;DOID:3095!2.10e-09!22;DOID:2994!2.10e-09!22;DOID:170!2.66e-09!6;DOID:305!2.18e-08!106;DOID:4074!1.99e-07!2;DOID:4905!1.99e-07!2;DOID:3498!1.99e-07!2 | |ontology_enrichment_disease=DOID:1799!3.50e-14!1;DOID:10165!3.50e-14!1;DOID:1798!3.50e-14!1;DOID:1793!1.72e-13!4;DOID:0050687!5.39e-11!143;DOID:3095!2.10e-09!22;DOID:2994!2.10e-09!22;DOID:170!2.66e-09!6;DOID:305!2.18e-08!106;DOID:4074!1.99e-07!2;DOID:4905!1.99e-07!2;DOID:3498!1.99e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.21e-40;1!DOID:10165;1.21e-40;1!DOID:1798;1.21e-40;1!DOID:3095;5.72e-17;22!DOID:2994;5.72e-17;22!DOID:1793;2.94e-11;4!DOID:170;6.13e-08;6 | |ontology_enrichment_disease_v019=DOID:1799;1.21e-40;1!DOID:10165;1.21e-40;1!DOID:1798;1.21e-40;1!DOID:3095;5.72e-17;22!DOID:2994;5.72e-17;22!DOID:1793;2.94e-11;4!DOID:170;6.13e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,9.91e-41,1;DOID:10165,9.91e-41,1;DOID:1798,9.91e-41,1;DOID:3095,5.72e-17,22;DOID:2994,5.72e-17,22;DOID:1793,2.80e-11,4;DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.41e-22!9;UBERON:0001557!4.42e-16!19 | |ontology_enrichment_uberon=UBERON:0001737!4.41e-22!9;UBERON:0001557!4.42e-16!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.94e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;2.94e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4;UBERON:0003124,5.70e-07,7 | |||
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|short_description=p9@CDH5 | |short_description=p9@CDH5 | ||
}} | }} |
Latest revision as of 08:11, 17 September 2015
Short description: | p9@CDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CDH5_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | -11bp_to_uc002eon.1_5end |
EntrezGene: | CDH5 |
HGNC: | 1764 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.85e-51 | 7 |
germ cell | 3.85e-51 | 7 |
epithelial cell of pancreas | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.91e-41 | 1 |
endocrine pancreas cancer | 9.91e-41 | 1 |
pancreatic endocrine carcinoma | 9.91e-41 | 1 |
germ cell and embryonal cancer | 5.72e-17 | 22 |
germ cell cancer | 5.72e-17 | 22 |
pancreatic cancer | 2.80e-11 | 4 |
endocrine gland cancer | 5.92e-08 | 6 |