FFCP PHASE1:Hg19::chr1:201336895..201336903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:201336895..201336903,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_at_chr1:201336895..201336903,+ | |description=CAGE_peak_at_chr1:201336895..201336903,+ | ||
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|ontology_enrichment_celltype=CL:0000188!3.46e-20!9;CL:0000039!1.10e-08!7;CL:0000586!1.10e-08!7 | |ontology_enrichment_celltype=CL:0000188!3.46e-20!9;CL:0000039!1.10e-08!7;CL:0000586!1.10e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002575;2.05e-07;2 | |ontology_enrichment_celltype_v019=CL:0002575;2.05e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.51e-29;4!UBERON:0007284;8.51e-29;4!UBERON:0010227;3.08e-14;1!UBERON:0010226;3.50e-14;1!UBERON:0004140;8.57e-14;1!UBERON:0000358;1.51e-13;1!UBERON:0003104;1.21e-09;31!UBERON:0006603;9.09e-07;65 | |ontology_enrichment_development_v019=UBERON:0005062;8.51e-29;4!UBERON:0007284;8.51e-29;4!UBERON:0010227;3.08e-14;1!UBERON:0010226;3.50e-14;1!UBERON:0004140;8.57e-14;1!UBERON:0000358;1.51e-13;1!UBERON:0003104;1.21e-09;31!UBERON:0006603;9.09e-07;65 | ||
|ontology_enrichment_disease=DOID:114!2.45e-09!2 | |ontology_enrichment_disease=DOID:114!2.45e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;3.59e-26;2!DOID:178;6.65e-14;1!DOID:326;6.65e-14;1!DOID:3978;6.65e-14;1!DOID:3394;6.65e-14;1!DOID:5844;6.65e-14;1!DOID:1287;1.34e-13;4 | |ontology_enrichment_disease_v019=DOID:114;3.59e-26;2!DOID:178;6.65e-14;1!DOID:326;6.65e-14;1!DOID:3978;6.65e-14;1!DOID:3394;6.65e-14;1!DOID:5844;6.65e-14;1!DOID:1287;1.34e-13;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,3.59e-26,2;DOID:178,6.65e-14,1;DOID:326,6.65e-14,1;DOID:3978,6.65e-14,1;DOID:3394,6.65e-14,1;DOID:5844,6.65e-14,1;DOID:1287,1.34e-13,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.03e-39;25!UBERON:0004151;1.84e-38;3!UBERON:0003978;3.94e-38;3!UBERON:0000946;3.94e-38;3!UBERON:0002081;4.07e-26;2!UBERON:0002133;7.67e-26;2!UBERON:0000948;2.54e-20;22!UBERON:0002079;3.08e-14;1!UBERON:0002084;3.50e-14;1!UBERON:0002082;3.50e-14;1!UBERON:0002146;3.98e-14;1!UBERON:0005623;3.98e-14;1!UBERON:0002135;5.85e-14;1!UBERON:0002134;1.10e-13;1!UBERON:0005208;1.10e-13;1!UBERON:0004145;1.10e-13;1!UBERON:0005946;1.10e-13;1!UBERON:0005965;1.10e-13;1!UBERON:0002078;1.10e-13;1!UBERON:0007029;1.51e-13;1!UBERON:0010313;6.50e-12;10!UBERON:0003103;3.99e-10;61 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.03e-39;25!UBERON:0004151;1.84e-38;3!UBERON:0003978;3.94e-38;3!UBERON:0000946;3.94e-38;3!UBERON:0002081;4.07e-26;2!UBERON:0002133;7.67e-26;2!UBERON:0000948;2.54e-20;22!UBERON:0002079;3.08e-14;1!UBERON:0002084;3.50e-14;1!UBERON:0002082;3.50e-14;1!UBERON:0002146;3.98e-14;1!UBERON:0005623;3.98e-14;1!UBERON:0002135;5.85e-14;1!UBERON:0002134;1.10e-13;1!UBERON:0005208;1.10e-13;1!UBERON:0004145;1.10e-13;1!UBERON:0005946;1.10e-13;1!UBERON:0005965;1.10e-13;1!UBERON:0002078;1.10e-13;1!UBERON:0007029;1.51e-13;1!UBERON:0010313;6.50e-12;10!UBERON:0003103;3.99e-10;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.84e-38,3;UBERON:0003978,3.94e-38,3;UBERON:0009751,3.94e-38,3;UBERON:0000946,3.94e-38,3;UBERON:0002523,3.94e-38,3;UBERON:0005983,3.94e-38,3;UBERON:0002165,3.94e-38,3;UBERON:0002062,3.94e-38,3;UBERON:0007280,3.94e-38,3;UBERON:0007100,1.04e-36,27;UBERON:0002081,4.08e-26,2;UBERON:0010227,4.08e-26,2;UBERON:0002133,7.67e-26,2;UBERON:0000948,1.31e-18,24;UBERON:0005498,1.31e-18,24;UBERON:0004140,1.31e-18,24;UBERON:0009881,1.31e-18,24;UBERON:0004141,1.31e-18,24;UBERON:0003084,1.31e-18,24;UBERON:0007005,1.31e-18,24;UBERON:0004139,1.31e-18,24;UBERON:0004291,1.31e-18,24;UBERON:0003103,2.91e-17,68;UBERON:0004797,9.33e-17,7;UBERON:0002079,3.08e-14,1;UBERON:0002084,3.50e-14,1;UBERON:0002082,3.50e-14,1;UBERON:0010226,3.50e-14,1;UBERON:0002146,3.98e-14,1;UBERON:0005623,3.98e-14,1;UBERON:0002135,5.85e-14,1;UBERON:0002134,1.10e-13,1;UBERON:0005208,1.10e-13,1;UBERON:0005946,1.10e-13,1;UBERON:0005965,1.10e-13,1;UBERON:0002078,1.10e-13,1;UBERON:0007029,1.25e-13,1;UBERON:0010313,6.50e-12,10;UBERON:0002342,6.50e-12,10;UBERON:0005062,6.50e-12,10;UBERON:0001009,4.29e-08,112 | |||
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| ||
|short_description=p@chr1:201336895..201336903,+ | |short_description=p@chr1:201336895..201336903,+ | ||
}} | }} |
Latest revision as of 02:07, 28 July 2015
Short description: | p@chr1:201336895..201336903, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201336895..201336903, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.59e-26 | 2 |
vascular disease | 6.65e-14 | 1 |
ischemia | 6.65e-14 | 1 |
extrinsic cardiomyopathy | 6.65e-14 | 1 |
myocardial ischemia | 6.65e-14 | 1 |
myocardial infarction | 6.65e-14 | 1 |
cardiovascular system disease | 1.34e-13 | 4 |