FFCP PHASE1:Hg19::chr10:90983491..90983502,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3988 | |EntrezGene=3988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6617 | |HGNC=6617 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000540050_5end | |association_with_transcript=-6bp_to_ENST00000540050_5end | ||
|cluster_id=chr10:90983491..90983502,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_15_at_LIPA_5end | |description=CAGE_peak_15_at_LIPA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002194!1.47e-10!63;CL:0000576!1.47e-10!63;CL:0000040!1.47e-10!63;CL:0000559!1.47e-10!63;CL:0002009!4.82e-10!65;CL:0000839!6.83e-09!70;CL:0000557!1.11e-08!71;CL:0000766!1.00e-07!76 | |ontology_enrichment_celltype=CL:0002194!1.47e-10!63;CL:0000576!1.47e-10!63;CL:0000040!1.47e-10!63;CL:0000559!1.47e-10!63;CL:0002009!4.82e-10!65;CL:0000839!6.83e-09!70;CL:0000557!1.11e-08!71;CL:0000766!1.00e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.52e-65;6!CL:0000840;5.55e-38;5!CL:0000990;1.27e-25;8!CL:0000451;4.06e-21;10!CL:0000473;1.89e-10;39!CL:0000234;1.89e-10;39 | |ontology_enrichment_celltype_v019=CL:0000235;1.52e-65;6!CL:0000840;5.55e-38;5!CL:0000990;1.27e-25;8!CL:0000451;4.06e-21;10!CL:0000473;1.89e-10;39!CL:0000234;1.89e-10;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.95e-65,6;CL:0000840,5.56e-38,5;CL:0001029,5.56e-38,5;CL:0000990,1.27e-25,8;CL:0000451,4.06e-21,10;CL:0002194,3.12e-20,59;CL:0000576,3.12e-20,59;CL:0000040,3.12e-20,59;CL:0000559,3.12e-20,59;CL:0002009,1.39e-19,61;CL:0000839,3.93e-18,66;CL:0000557,7.24e-18,67;CL:0000766,1.19e-16,72;CL:0000763,3.66e-11,108;CL:0000049,3.66e-11,108;CL:0002087,1.73e-10,115;CL:0002031,4.71e-10,120;CL:0000738,7.15e-09,136;CL:0000473,1.20e-08,48;CL:0000234,1.20e-08,48;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.59e-07,168;CL:0000988,8.41e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.90e-08!80;UBERON:0001474!1.27e-07!86;UBERON:0004765!7.12e-07!101;UBERON:0001434!7.12e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!7.90e-08!80;UBERON:0001474!1.27e-07!86;UBERON:0004765!7.12e-07!101;UBERON:0001434!7.12e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.65e-16,76;UBERON:0001474,1.18e-14,82;UBERON:0004765,2.28e-13,90;UBERON:0002405,6.07e-13,93;UBERON:0002390,2.73e-12,98;UBERON:0003061,2.73e-12,98;UBERON:0001434,4.78e-12,100;UBERON:0002193,3.66e-11,108;UBERON:0002204,3.25e-07,167 | |||
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| ||
|short_description=p15@LIPA | |short_description=p15@LIPA | ||
}} | }} |
Latest revision as of 21:33, 19 September 2015
Short description: | p15@LIPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LIPA_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | -6bp_to_ENST00000540050_5end |
EntrezGene: | LIPA |
HGNC: | 6617 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.95e-65 | 6 |
immature conventional dendritic cell | 5.56e-38 | 5 |
common dendritic progenitor | 5.56e-38 | 5 |
conventional dendritic cell | 1.27e-25 | 8 |
dendritic cell | 4.06e-21 | 10 |
monopoietic cell | 3.12e-20 | 59 |
monocyte | 3.12e-20 | 59 |
monoblast | 3.12e-20 | 59 |
promonocyte | 3.12e-20 | 59 |
macrophage dendritic cell progenitor | 1.39e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.93e-18 | 66 |
granulocyte monocyte progenitor cell | 7.24e-18 | 67 |
myeloid leukocyte | 1.19e-16 | 72 |
myeloid cell | 3.66e-11 | 108 |
common myeloid progenitor | 3.66e-11 | 108 |
nongranular leukocyte | 1.73e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.71e-10 | 120 |
leukocyte | 7.15e-09 | 136 |
defensive cell | 1.20e-08 | 48 |
phagocyte | 1.20e-08 | 48 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.59e-07 | 168 |
hematopoietic cell | 8.41e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.65e-16 | 76 |
bone element | 1.18e-14 | 82 |
skeletal element | 2.28e-13 | 90 |
immune system | 6.07e-13 | 93 |
hematopoietic system | 2.73e-12 | 98 |
blood island | 2.73e-12 | 98 |
skeletal system | 4.78e-12 | 100 |
hemolymphoid system | 3.66e-11 | 108 |
musculoskeletal system | 3.25e-07 | 167 |