FFCP PHASE1:Hg19::chr17:7836505..7836526,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116840 | |EntrezGene=116840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29616 | |HGNC=29616 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_AB527810,CU676846,DQ892038,DQ895229_5end | |association_with_transcript=108bp_to_AB527810,CU676846,DQ892038,DQ895229_5end | ||
|cluster_id=chr17:7836505..7836526,+ | |||
|coexpression_cluster_id=C477 | |coexpression_cluster_id=C477 | ||
|description=CAGE_peak_3_at_CNTROB_5end | |description=CAGE_peak_3_at_CNTROB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!4.18e-09!180 | |ontology_enrichment_celltype=CL:0000055!4.18e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.26e-25;5!CL:0000163;6.78e-14;9 | |ontology_enrichment_celltype_v019=CL:0000097;8.26e-25;5!CL:0000163;6.78e-14;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.63e-24,5;CL:0002028,1.63e-24,5;CL:0000163,9.83e-14,9 | |||
|ontology_enrichment_development_v019=UBERON:0005795;8.68e-08;10 | |ontology_enrichment_development_v019=UBERON:0005795;8.68e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;9.40e-25;3!DOID:127;9.40e-25;3!DOID:0060072;1.01e-18;4 | |ontology_enrichment_disease_v019=DOID:0060084;9.40e-25;3!DOID:127;9.40e-25;3!DOID:0060072;1.01e-18;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.06e-25,3;DOID:127,8.06e-25,3;DOID:0060072,9.02e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!7.67e-09!167 | |ontology_enrichment_uberon=UBERON:0002204!7.67e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.97e-09;1!UBERON:0006518;5.97e-09;1!UBERON:0008949;5.97e-09;1!UBERON:0000101;5.97e-09;1!UBERON:0002167;5.97e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0002171;5.97e-09;1!UBERON:0006518;5.97e-09;1!UBERON:0008949;5.97e-09;1!UBERON:0000101;5.97e-09;1!UBERON:0002167;5.97e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.19e-09,1;UBERON:0006518,4.19e-09,1;UBERON:0008949,4.19e-09,1;UBERON:0000101,4.19e-09,1;UBERON:0002167,4.19e-09,1 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,1.89515962028049,0.261185628199839,0.491467873003018,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0.487932798790507,0.369363174230364,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.941211697713023,1.09162460023138,0.224723484445085,1.22433556948361,0.962787081228281,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0,0,0.371457501329565,0,0,0.694281003215189,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0.269421344139376,0,0.605429710579726,0,0.234321431833797,1.87296046098192,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0,0.723280468230358,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.276149695926898,0.323292113637624,0,0.302256294682921,0.67824236924195,0.386521706326594,0,0,0,0,0.348581828608555,0,0,0,0,1.28648187638577,0,0,0,0,0.674338760312407,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.492434012174795,0.468008530278475,0.891786973732369,0,0.16798212819886,0.567100388969546,0,0,0,2.46331618947972,1.05658120815871,1.03664057770386,0.864719720501769,1.38866676769018,0.190493682876507,0,0,0,0.102827492703324,1.8020583470635,0.285826432630578,0.224262168690721,0,0.1466765716419,0.775630294546667,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,85.1915920464566,1.64648067356154,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.579125226670317,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0,0.260650843404249,0.979005787313703,2.05886054286514,0,0,0,0.303127571446259,0,0,0,0,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.462629081407967,0.532685175939381,0.410635780069046,0,0.581051892299796,0,0,0,0.459257792658427,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,0,0,0.127612712494584,0,0.929691098594572,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0.42793898803392,1.59101623962968,0,0.179872457583315,0.274537029736055,0.117812402345686,0.808729926293264,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0,1.08073945114433,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,3.15679180770434,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0.164230914106418,0,0.176512253383001,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,3.25799761052228,2.5926644736038,4.57222304153173,0,0.164185041498678,1.02232813071253,0.339936274560377,0,0,0,0.13223260174269,0,0,2.34932307648928,0.78602152549833,1.65695622138878,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,1.66354016139563,0.310874401165561,0.147855149989634,0,0,0,0.414706207840855,0.797525143673985,0.521745061811734,0,0.380805212168795,0.813741466409323,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0.351742488719241,0.127762427639595,1.07140367175657,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.354996002191696,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.219881033490858,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.743990036333503,0.462175628631418,0.432626562123789,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,1.89515962028049,0.261185628199839,0.491467873003018,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0.487932798790507,0.369363174230364,0,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.941211697713023,1.09162460023138,0.224723484445085,1.22433556948361,0.962787081228281,0,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0,0.132957960518865,0,0,0.371457501329565,0,0,0.694281003215189,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0.269421344139376,0,0.605429710579726,0,0.234321431833797,1.87296046098192,0.570471821544449,0,0,0,0.140450806702248,0.204154171254893,0,0.723280468230358,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.877955241761676,0,0.150238058906597,0,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.276149695926898,0.323292113637624,0,0.302256294682921,0.67824236924195,0.386521706326594,0,0,0,0,0.348581828608555,0,0,0,0,1.28648187638577,0,0,0,0,0.674338760312407,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.492434012174795,0.468008530278475,0.891786973732369,0,0.16798212819886,0.567100388969546,0,0,0,2.46331618947972,1.05658120815871,1.03664057770386,0.864719720501769,1.38866676769018,0.190493682876507,0,0,0,0.102827492703324,1.8020583470635,0.285826432630578,0.224262168690721,0,0.1466765716419,0.775630294546667,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,85.1915920464566,1.64648067356154,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.579125226670317,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0,0.260650843404249,0.979005787313703,2.05886054286514,0,0,0,0.303127571446259,0,0,0,0,0,0.256278298511402,0.511707249066704,0.160853921143607,0,0.462629081407967,0.532685175939381,0.410635780069046,0,0.581051892299796,0,0,0,0.459257792658427,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,0,0,0.127612712494584,0,0.929691098594572,0.62962469366128,0,0.616067160352178,0,0,0,0,0,0.316379424718726,0.571890581771475,0,0.42793898803392,1.59101623962968,0,0.179872457583315,0.274537029736055,0.117812402345686,0.808729926293264,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0,1.08073945114433,0.35667105148125,0.709522128141196,0.211107635297664,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,3.15679180770434,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0.164230914106418,0,0.176512253383001,0,0,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,3.25799761052228,2.5926644736038,4.57222304153173,0,0.164185041498678,1.02232813071253,0.339936274560377,0,0,0,0.13223260174269,0,0,2.34932307648928,0.78602152549833,1.65695622138878,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,1.66354016139563,0.310874401165561,0.147855149989634,0,0,0,0.414706207840855,0.797525143673985,0.521745061811734,0,0.380805212168795,0.813741466409323,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.596748666348824,0,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0.351742488719241,0.127762427639595,1.07140367175657,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.354996002191696,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.219881033490858,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0.743990036333503,0.462175628631418,0.432626562123789,0.126166424835079,0.109265571963696,0.253397002022874,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0,0.224263725161227,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p3@CNTROB | |short_description=p3@CNTROB | ||
}} | }} |
Latest revision as of 04:16, 18 September 2015
Short description: | p3@CNTROB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNTROB_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | 108bp_to_AB527810, CU676846, DQ892038, DQ895229_5end |
EntrezGene: | CNTROB |
HGNC: | 29616 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.63e-24 | 5 |
basophil mast progenitor cell | 1.63e-24 | 5 |
endocrine cell | 9.83e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.19e-09 | 1 |
right lung lobe | 4.19e-09 | 1 |
lower lobe of lung | 4.19e-09 | 1 |
lobe of lung | 4.19e-09 | 1 |
right lung | 4.19e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.06e-25 | 3 |
leiomyoma | 8.06e-25 | 3 |
benign neoplasm | 9.02e-19 | 4 |