FFCP PHASE1:Hg19::chr3:154899522..154899536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:154899522..154899536,+ | |||
|coexpression_cluster_id=C1514 | |coexpression_cluster_id=C1514 | ||
|description=CAGE_peak_at_chr3:154899522..154899536,+ | |description=CAGE_peak_at_chr3:154899522..154899536,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.01e-10!180;CL:0002551!8.20e-08!6;CL:0000775!2.39e-07!3;CL:0000048!3.06e-07!430;CL:0000680!5.94e-07!57;CL:0000056!5.94e-07!57;CL:0000355!5.94e-07!57;CL:0000723!6.78e-07!436 | |ontology_enrichment_celltype=CL:0000055!1.01e-10!180;CL:0002551!8.20e-08!6;CL:0000775!2.39e-07!3;CL:0000048!3.06e-07!430;CL:0000680!5.94e-07!57;CL:0000056!5.94e-07!57;CL:0000355!5.94e-07!57;CL:0000723!6.78e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002561;1.26e-31;2!CL:0000775;1.51e-21;3!CL:0002559;2.76e-13;5!CL:0002617;3.71e-09;2!CL:0002588;6.17e-09;2!CL:0000094;1.11e-08;8!CL:0000362;8.74e-08;9!CL:0000359;2.01e-07;32!CL:0002539;5.11e-07;10 | |ontology_enrichment_celltype_v019=CL:0002561;1.26e-31;2!CL:0000775;1.51e-21;3!CL:0002559;2.76e-13;5!CL:0002617;3.71e-09;2!CL:0002588;6.17e-09;2!CL:0000094;1.11e-08;8!CL:0000362;8.74e-08;9!CL:0000359;2.01e-07;32!CL:0002539;5.11e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002561,8.57e-32,2;CL:0000775,1.43e-21,3;CL:0002559,2.37e-13,5;CL:0002617,3.71e-09,2;CL:0002588,8.09e-09,2;CL:0000094,1.09e-08,8;CL:0000359,7.24e-08,32;CL:0000362,8.03e-08,9;CL:0002539,4.96e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.91e-09!70;UBERON:0000914!5.06e-08!83;UBERON:0002329!5.06e-08!83;UBERON:0003077!5.06e-08!83;UBERON:0003059!5.06e-08!83;UBERON:0007282!5.06e-08!83;UBERON:0009618!5.06e-08!83;UBERON:0007285!5.06e-08!83;UBERON:0000486!1.85e-07!82 | |ontology_enrichment_uberon=UBERON:0004290!6.91e-09!70;UBERON:0000914!5.06e-08!83;UBERON:0002329!5.06e-08!83;UBERON:0003077!5.06e-08!83;UBERON:0003059!5.06e-08!83;UBERON:0007282!5.06e-08!83;UBERON:0009618!5.06e-08!83;UBERON:0007285!5.06e-08!83;UBERON:0000486!1.85e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.26e-31;2!UBERON:0005942;1.26e-31;2!UBERON:0005932;1.26e-31;2!UBERON:0002073;2.76e-13;5!UBERON:0000310;4.19e-07;10!UBERON:0004237;5.11e-07;10!UBERON:0004695;5.11e-07;10!UBERON:0002111;5.11e-07;10!UBERON:0004178;5.11e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0005933;1.26e-31;2!UBERON:0005942;1.26e-31;2!UBERON:0005932;1.26e-31;2!UBERON:0002073;2.76e-13;5!UBERON:0000310;4.19e-07;10!UBERON:0004237;5.11e-07;10!UBERON:0004695;5.11e-07;10!UBERON:0002111;5.11e-07;10!UBERON:0004178;5.11e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,8.57e-32,2;UBERON:0005942,8.57e-32,2;UBERON:0005932,8.57e-32,2;UBERON:0002073,2.37e-13,5;UBERON:0005086,2.37e-13,5;UBERON:0000310,4.01e-07,10;UBERON:0004237,4.96e-07,10;UBERON:0004695,4.96e-07,10;UBERON:0002111,4.96e-07,10;UBERON:0004178,4.96e-07,10 | |||
|phase1_expression=0.181678379270557,4.92431204949261,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0.213557388818567,0.635795703478686,0,0.206105058476878,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0.205654985406647,0.901029173531752,0,0,0,0,0.129271715757778,0,0.845302752556,0.797814349754612,0,0,0,0,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,8.97484377612075,1.65766205374414,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,1.68396056659844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.429680979473094,0.290033387828457,0.170453254832202,0,0,0,0,0,1.85938219718914,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0.117812402345686,0,1.58510321173008,0,0,0.731140468893853,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,1.17898849215745,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0.754703705257725,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0,0,0,0,0,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.596493833314104,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,4.92431204949261,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.936480230490962,0.570471821544449,0.747243402759005,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0.213557388818567,0.635795703478686,0,0.206105058476878,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0.205654985406647,0.901029173531752,0,0,0,0,0.129271715757778,0,0.845302752556,0.797814349754612,0,0,0,0,0,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,8.97484377612075,1.65766205374414,0,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,1.68396056659844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0.429680979473094,0.290033387828457,0.170453254832202,0,0,0,0,0,1.85938219718914,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0.117812402345686,0,1.58510321173008,0,0,0.731140468893853,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,1.17898849215745,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0.754703705257725,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,0,0,0,0,0,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.596493833314104,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:154899522..154899536,+ | |short_description=p@chr3:154899522..154899536,+ | ||
}} | }} |
Latest revision as of 17:21, 29 July 2015
Short description: | p@chr3:154899522..154899536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:154899522..154899536, + |
Coexpression cluster: | C1514_Neutrophils_Adipocyte_tenocyte_chorionic_Hair_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 8.57e-32 | 2 |
neutrophil | 1.43e-21 | 3 |
hair follicle cell | 2.37e-13 | 5 |
adipocyte of breast | 3.71e-09 | 2 |
smooth muscle cell of the umbilical vein | 8.09e-09 | 2 |
granulocyte | 1.09e-08 | 8 |
vascular associated smooth muscle cell | 7.24e-08 | 32 |
epidermal cell | 8.03e-08 | 9 |
aortic smooth muscle cell | 4.96e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 8.57e-32 | 2 |
hair outer root sheath | 8.57e-32 | 2 |
bulb of hair follicle | 8.57e-32 | 2 |
hair follicle | 2.37e-13 | 5 |
hair follicle placode | 2.37e-13 | 5 |
breast | 4.01e-07 | 10 |
blood vessel smooth muscle | 4.96e-07 | 10 |
arterial system smooth muscle | 4.96e-07 | 10 |
artery smooth muscle tissue | 4.96e-07 | 10 |
aorta smooth muscle tissue | 4.96e-07 | 10 |