FFCP PHASE1:Hg19::chr2:13056054..13056074,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:13056054..13056074,- | |||
|coexpression_cluster_id=C4124 | |coexpression_cluster_id=C4124 | ||
|description=CAGE_peak_at_chr2:13056054..13056074,- | |description=CAGE_peak_at_chr2:13056054..13056074,- | ||
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|ontology_enrichment_celltype=CL:0000055!1.67e-17!180;CL:0000057!1.05e-15!75;CL:0002334!2.56e-13!12;CL:0000048!8.76e-12!430;CL:0000723!2.41e-11!436;CL:0000034!8.88e-11!444;CL:0002620!3.40e-09!23;CL:0000136!2.60e-08!15;CL:0002579!7.27e-08!3;CL:0002615!8.85e-08!3;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0002580!2.36e-07!3 | |ontology_enrichment_celltype=CL:0000055!1.67e-17!180;CL:0000057!1.05e-15!75;CL:0002334!2.56e-13!12;CL:0000048!8.76e-12!430;CL:0000723!2.41e-11!436;CL:0000034!8.88e-11!444;CL:0002620!3.40e-09!23;CL:0000136!2.60e-08!15;CL:0002579!7.27e-08!3;CL:0002615!8.85e-08!3;CL:0000680!1.03e-07!57;CL:0000056!1.03e-07!57;CL:0000355!1.03e-07!57;CL:0002580!2.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.91e-18;3!CL:0002615;4.23e-18;3!CL:0002334;6.46e-17;12!CL:0000515;8.35e-17;3!CL:0000136;1.50e-15;13!CL:0000056;9.58e-13;4!CL:0002617;1.93e-12;2!CL:0002580;1.76e-08;3!CL:0000680;1.72e-07;7!CL:0002581;2.58e-07;1!CL:0002616;2.82e-07;1 | |ontology_enrichment_celltype_v019=CL:0002579;2.91e-18;3!CL:0002615;4.23e-18;3!CL:0002334;6.46e-17;12!CL:0000515;8.35e-17;3!CL:0000136;1.50e-15;13!CL:0000056;9.58e-13;4!CL:0002617;1.93e-12;2!CL:0002580;1.76e-08;3!CL:0000680;1.72e-07;7!CL:0002581;2.58e-07;1!CL:0002616;2.82e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.08e-18,3;CL:0002615,5.17e-18,3;CL:0002334,5.95e-17,12;CL:0000136,2.43e-13,15;CL:0000515,8.30e-13,4;CL:0002617,2.22e-12,2;CL:0002580,1.54e-08,3;CL:0002581,2.50e-07,1;CL:0002616,2.82e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;9.58e-13;4 | |ontology_enrichment_development_v019=CL:0000515;9.58e-13;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;3.36e-07;1!DOID:2513;4.25e-07;1!DOID:3369;7.36e-07;1!DOID:3571;7.36e-07;1 | |ontology_enrichment_disease_v019=DOID:5662;3.36e-07;1!DOID:2513;4.25e-07;1!DOID:3369;7.36e-07;1!DOID:3571;7.36e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,3.36e-07,1;DOID:2513,4.01e-07,1;DOID:3571,6.76e-07,1;DOID:3369,7.57e-07,1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.44e-34;6!UBERON:0002358;1.44e-34;6!UBERON:0003684;1.44e-34;6!UBERON:0001178;1.44e-34;6!UBERON:0004457;7.08e-23;9!UBERON:0000042;7.08e-23;9!UBERON:0005406;6.43e-13;2!UBERON:0000310;2.84e-09;10!UBERON:0001443;1.94e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.44e-34;6!UBERON:0002358;1.44e-34;6!UBERON:0003684;1.44e-34;6!UBERON:0001178;1.44e-34;6!UBERON:0004457;7.08e-23;9!UBERON:0000042;7.08e-23;9!UBERON:0005406;6.43e-13;2!UBERON:0000310;2.84e-09;10!UBERON:0001443;1.94e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.87e-34,6;UBERON:0002358,1.87e-34,6;UBERON:0003684,1.87e-34,6;UBERON:0001178,1.87e-34,6;UBERON:0004457,5.78e-17,12;UBERON:0000042,5.78e-17,12;UBERON:0005406,6.25e-13,2;UBERON:0002100,5.11e-10,199;UBERON:0000310,2.78e-09,10;UBERON:0001443,1.91e-08,11;UBERON:0009569,2.94e-08,112;UBERON:0004145,5.04e-08,3;UBERON:0004797,1.12e-07,7;UBERON:0004573,1.58e-07,33;UBERON:0004571,1.58e-07,33;UBERON:0001637,2.36e-07,42;UBERON:0003509,2.36e-07,42;UBERON:0004572,2.36e-07,42 | |||
|phase1_expression=10.1739892391512,2.14100523890983,22.6936590594514,4.00293193412522,3.12872766099101,11.3404008133048,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,4.7717156823066,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.886413581652058,18.0076485905978,1.14734648299525,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.453728732640084,0,0.427114777637135,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.18611685633159,0.168776332241266,0.584622030967192,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0,0,0,2.89562613335158,1.02738161275192,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0.300946099727719,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,14.1421450456703,1.84154367945675,0.561320188866147,21.6555162242135,5.62877973973374,4.18220194973379,14.8418066444991,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,3.71876439437829,9.75918275174984,0.6970372701606,0.308033580176089,0,0,0.18532421910392,3.14874750832381,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,3.3171948762061,2.19225442626881,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66559381492711,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,1.43574604915363,0,0,0.223171457441873,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0.457680136793847,0,0.15543720058278,0.443565449968902,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54547241524641,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,1.33151354837103,0,0 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|phase1_expression=10.1739892391512,2.14100523890983,22.6936590594514,4.00293193412522,3.12872766099101,11.3404008133048,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0,4.7717156823066,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.886413581652058,18.0076485905978,1.14734648299525,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.453728732640084,0,0.427114777637135,0.211931901159562,0.600182192168805,0.206105058476878,0.772921620136887,0.18611685633159,0.168776332241266,0.584622030967192,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0,0,0,2.89562613335158,1.02738161275192,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0.300946099727719,4.5481500811197,0,0,0,0,0,0,0,0,0,0,0,0,14.1421450456703,1.84154367945675,0.561320188866147,21.6555162242135,5.62877973973374,4.18220194973379,14.8418066444991,0,0.177561725313127,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,3.71876439437829,9.75918275174984,0.6970372701606,0.308033580176089,0,0,0.18532421910392,3.14874750832381,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,3.3171948762061,2.19225442626881,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66559381492711,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,1.43574604915363,0,0,0.223171457441873,0,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0.457680136793847,0,0.15543720058278,0.443565449968902,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0.464033759878494,0.398095888698616,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54547241524641,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | ||
|short_description=p@chr2:13056054..13056074,- | |short_description=p@chr2:13056054..13056074,- | ||
}} | }} |
Latest revision as of 00:15, 29 July 2015
Short description: | p@chr2:13056054..13056074, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:13056054..13056074, - |
Coexpression cluster: | C4124_Adipocyte_Preadipocyte_Fibroblast_Ewing_basal_Smooth_neurofibroma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.08e-18 | 3 |
adipocyte of omentum tissue | 5.17e-18 | 3 |
preadipocyte | 5.95e-17 | 12 |
fat cell | 2.43e-13 | 15 |
skeletal muscle myoblast | 8.30e-13 | 4 |
adipocyte of breast | 2.22e-12 | 2 |
preadipocyte of the breast | 1.54e-08 | 3 |
perirenal preadipocyte | 2.50e-07 | 1 |
perirenal adipocyte cell | 2.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.87e-34 | 6 |
peritoneum | 1.87e-34 | 6 |
abdominal cavity | 1.87e-34 | 6 |
visceral peritoneum | 1.87e-34 | 6 |
cavity lining | 5.78e-17 | 12 |
serous membrane | 5.78e-17 | 12 |
perirenal fat | 6.25e-13 | 2 |
trunk | 5.11e-10 | 199 |
breast | 2.78e-09 | 10 |
chest | 1.91e-08 | 11 |
subdivision of trunk | 2.94e-08 | 112 |
outflow tract | 5.04e-08 | 3 |
blood vessel layer | 1.12e-07 | 7 |
systemic artery | 1.58e-07 | 33 |
systemic arterial system | 1.58e-07 | 33 |
artery | 2.36e-07 | 42 |
arterial blood vessel | 2.36e-07 | 42 |
arterial system | 2.36e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.36e-07 | 1 |
basal cell carcinoma | 4.01e-07 | 1 |
liver cancer | 6.76e-07 | 1 |
peripheral primitive neuroectodermal tumor | 7.57e-07 | 1 |