FFCP PHASE1:Hg19::chr12:82204256..82204263,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:82204256..82204263,+ | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr12:82204256..82204263,+ | |description=CAGE_peak_at_chr12:82204256..82204263,+ | ||
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|ontology_enrichment_celltype=CL:0002057!1.93e-98!42;CL:0000860!2.07e-91!45;CL:0002194!8.81e-71!63;CL:0000576!8.81e-71!63;CL:0000040!8.81e-71!63;CL:0000559!8.81e-71!63;CL:0002009!2.05e-68!65;CL:0000766!2.32e-65!76;CL:0000839!4.43e-63!70;CL:0000557!4.22e-62!71;CL:0002087!4.76e-47!119;CL:0000738!3.10e-46!140;CL:0000763!9.32e-45!112;CL:0000049!9.32e-45!112;CL:0002031!1.60e-39!124;CL:0000037!3.18e-38!172;CL:0000566!3.18e-38!172;CL:0000988!1.10e-35!182;CL:0002032!1.24e-33!165;CL:0000837!1.24e-33!165;CL:0000134!4.36e-15!358;CL:0002320!1.24e-14!365;CL:0000219!4.89e-13!390;CL:0000048!4.00e-11!430;CL:0000723!7.48e-11!436;CL:0000034!1.68e-10!444;CL:0000842!2.98e-07!3;CL:0000767!6.55e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.93e-98!42;CL:0000860!2.07e-91!45;CL:0002194!8.81e-71!63;CL:0000576!8.81e-71!63;CL:0000040!8.81e-71!63;CL:0000559!8.81e-71!63;CL:0002009!2.05e-68!65;CL:0000766!2.32e-65!76;CL:0000839!4.43e-63!70;CL:0000557!4.22e-62!71;CL:0002087!4.76e-47!119;CL:0000738!3.10e-46!140;CL:0000763!9.32e-45!112;CL:0000049!9.32e-45!112;CL:0002031!1.60e-39!124;CL:0000037!3.18e-38!172;CL:0000566!3.18e-38!172;CL:0000988!1.10e-35!182;CL:0002032!1.24e-33!165;CL:0000837!1.24e-33!165;CL:0000134!4.36e-15!358;CL:0002320!1.24e-14!365;CL:0000219!4.89e-13!390;CL:0000048!4.00e-11!430;CL:0000723!7.48e-11!436;CL:0000034!1.68e-10!444;CL:0000842!2.98e-07!3;CL:0000767!6.55e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-62;33!CL:0002057;2.75e-62;33!CL:0000473;2.46e-44;39!CL:0000234;2.46e-44;39!CL:0000576;6.08e-38;48!CL:0000766;4.08e-31;69!CL:0002087;1.00e-15;104!CL:0002393;2.50e-14;6!CL:0002397;2.50e-14;6!CL:0000763;4.89e-13;100!CL:0000226;4.99e-13;3!CL:0000842;4.99e-13;3!CL:0000738;6.23e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.75e-62;33!CL:0002057;2.75e-62;33!CL:0000473;2.46e-44;39!CL:0000234;2.46e-44;39!CL:0000576;6.08e-38;48!CL:0000766;4.08e-31;69!CL:0002087;1.00e-15;104!CL:0002393;2.50e-14;6!CL:0002397;2.50e-14;6!CL:0000763;4.89e-13;100!CL:0000226;4.99e-13;3!CL:0000842;4.99e-13;3!CL:0000738;6.23e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.26e-75,42;CL:0002057,5.26e-75,42;CL:0000473,2.68e-65,48;CL:0000234,2.68e-65,48;CL:0002194,1.06e-51,59;CL:0000576,1.06e-51,59;CL:0000040,1.06e-51,59;CL:0000559,1.06e-51,59;CL:0002009,6.05e-50,61;CL:0000766,1.10e-46,72;CL:0000839,5.17e-46,66;CL:0000557,2.69e-45,67;CL:0002087,1.57e-31,115;CL:0000763,2.53e-30,108;CL:0000049,2.53e-30,108;CL:0000738,5.04e-29,136;CL:0002031,3.24e-24,120;CL:0000037,5.84e-23,168;CL:0000988,1.21e-21,177;CL:0002032,1.97e-19,161;CL:0000837,1.97e-19,161;CL:0000226,4.56e-13,3;CL:0000842,4.56e-13,3;CL:0002393,9.86e-10,9;CL:0002397,9.86e-10,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.83e-53;42!CL:0000049;3.07e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.83e-53;42!CL:0000049;3.07e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.36e-58!80;UBERON:0001474!2.06e-53!86;UBERON:0002390!4.54e-50!102;UBERON:0003061!4.54e-50!102;UBERON:0002193!5.94e-45!112;UBERON:0004765!1.87e-44!101;UBERON:0001434!1.87e-44!101;UBERON:0002405!3.51e-38!115;UBERON:0002204!4.98e-24!167;UBERON:0003081!4.59e-21!216;UBERON:0002384!5.13e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!6.36e-58!80;UBERON:0001474!2.06e-53!86;UBERON:0002390!4.54e-50!102;UBERON:0003061!4.54e-50!102;UBERON:0002193!5.94e-45!112;UBERON:0004765!1.87e-44!101;UBERON:0001434!1.87e-44!101;UBERON:0002405!3.51e-38!115;UBERON:0002204!4.98e-24!167;UBERON:0003081!4.59e-21!216;UBERON:0002384!5.13e-14!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-39,76;UBERON:0002390,1.90e-37,98;UBERON:0003061,1.90e-37,98;UBERON:0001474,1.31e-36,82;UBERON:0002193,9.59e-34,108;UBERON:0004765,3.83e-33,90;UBERON:0002405,5.39e-32,93;UBERON:0001434,1.40e-29,100;UBERON:0003081,1.27e-16,203;UBERON:0002204,1.29e-16,167;UBERON:0000926,1.35e-09,315;UBERON:0004120,1.35e-09,315;UBERON:0006603,1.35e-09,315;UBERON:0002384,1.10e-08,371 | |||
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|short_description=p@chr12:82204256..82204263,+ | |short_description=p@chr12:82204256..82204263,+ | ||
}} | }} |
Latest revision as of 12:57, 24 July 2015
Short description: | p@chr12:82204256..82204263, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:82204256..82204263, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-39 | 76 |
hematopoietic system | 1.90e-37 | 98 |
blood island | 1.90e-37 | 98 |
bone element | 1.31e-36 | 82 |
hemolymphoid system | 9.59e-34 | 108 |
skeletal element | 3.83e-33 | 90 |
immune system | 5.39e-32 | 93 |
skeletal system | 1.40e-29 | 100 |
lateral plate mesoderm | 1.27e-16 | 203 |
musculoskeletal system | 1.29e-16 | 167 |
mesoderm | 1.35e-09 | 315 |
mesoderm-derived structure | 1.35e-09 | 315 |
presumptive mesoderm | 1.35e-09 | 315 |
connective tissue | 1.10e-08 | 371 |